Protein–RNA interactions for Protein: Q9D3E6

Stag1, Cohesin subunit SA-1, mousemouse

Predictions only

Length 1,258 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Stag1Q9D3E6 4930431L21Rik-202ENSMUST00000200253 624 ntTSL 1 (best) BASIC3.34□□□□□ -1.87
Stag1Q9D3E6 Vmn1r-ps13-201ENSMUST00000204697 134 ntBASIC3.34□□□□□ -1.87
Stag1Q9D3E6 Gm45452-201ENSMUST00000210905 177 ntBASIC3.34□□□□□ -1.87
Stag1Q9D3E6 Gm31025-201ENSMUST00000222553 482 ntTSL 5 BASIC3.34□□□□□ -1.87
Stag1Q9D3E6 Olfr479-202ENSMUST00000209805 2902 ntAPPRIS P1 TSL 5 BASIC3.33□□□□□ -1.88
Stag1Q9D3E6 Olfr839-ps1-201ENSMUST00000212127 7759 ntAPPRIS P1 TSL 5 BASIC3.33□□□□□ -1.88
Stag1Q9D3E6 Scgb1b24-201ENSMUST00000108087 279 ntAPPRIS P1 TSL 1 (best) BASIC3.33□□□□□ -1.88
Stag1Q9D3E6 Gm26247-201ENSMUST00000116702 91 ntBASIC3.33□□□□□ -1.88
Stag1Q9D3E6 Gm14978-201ENSMUST00000129000 304 ntTSL 3 BASIC3.33□□□□□ -1.88
Stag1Q9D3E6 Gm24504-201ENSMUST00000157679 100 ntBASIC3.33□□□□□ -1.88
Stag1Q9D3E6 Gm22843-201ENSMUST00000157710 134 ntBASIC3.33□□□□□ -1.88
Stag1Q9D3E6 Gm16117-201ENSMUST00000160544 324 ntTSL 5 BASIC3.33□□□□□ -1.88
Stag1Q9D3E6 Gm10772-201ENSMUST00000167981 255 ntAPPRIS P1 BASIC3.33□□□□□ -1.88
Stag1Q9D3E6 Gm24084-201ENSMUST00000175173 137 ntBASIC3.33□□□□□ -1.88
Stag1Q9D3E6 Gm23921-201ENSMUST00000175258 107 ntBASIC3.33□□□□□ -1.88
Stag1Q9D3E6 Mir8103-201ENSMUST00000183945 107 ntBASIC3.33□□□□□ -1.88
Stag1Q9D3E6 Gm28995-201ENSMUST00000186625 261 ntBASIC3.33□□□□□ -1.88
Stag1Q9D3E6 Gm6801-201ENSMUST00000190697 339 ntBASIC3.33□□□□□ -1.88
Stag1Q9D3E6 Gm43669-201ENSMUST00000198229 436 ntBASIC3.33□□□□□ -1.88
Stag1Q9D3E6 Gm44010-201ENSMUST00000204432 331 ntBASIC3.33□□□□□ -1.88
Stag1Q9D3E6 Snhg1-208ENSMUST00000206029 408 ntTSL 3 BASIC3.33□□□□□ -1.88
Stag1Q9D3E6 Gm44858-201ENSMUST00000207360 154 ntBASIC3.33□□□□□ -1.88
Stag1Q9D3E6 Snora23-201ENSMUST00000082517 184 ntBASIC3.33□□□□□ -1.88
Stag1Q9D3E6 Gm25199-201ENSMUST00000083095 104 ntBASIC3.33□□□□□ -1.88
Stag1Q9D3E6 Gm23345-201ENSMUST00000083817 150 ntBASIC3.33□□□□□ -1.88
Stag1Q9D3E6 Gm10192-201ENSMUST00000086672 327 ntAPPRIS P1 BASIC3.33□□□□□ -1.88
Stag1Q9D3E6 Wnk3-201ENSMUST00000096285 8551 ntAPPRIS ALT2 TSL 5 BASIC3.32□□□□□ -1.88
Stag1Q9D3E6 Vmn1r67-202ENSMUST00000226237 2352 ntAPPRIS ALT2 BASIC3.32□□□□□ -1.88
Stag1Q9D3E6 Ranbp2-201ENSMUST00000003310 9608 ntAPPRIS P1 TSL 5 BASIC3.32□□□□□ -1.88
Stag1Q9D3E6 Gm38162-201ENSMUST00000195562 4597 ntBASIC3.32□□□□□ -1.88
Stag1Q9D3E6 Gm44644-202ENSMUST00000208825 3133 ntTSL 2 BASIC3.32□□□□□ -1.88
Stag1Q9D3E6 Olfr1206-202ENSMUST00000216950 3303 ntAPPRIS P1 TSL 5 BASIC3.32□□□□□ -1.88
Stag1Q9D3E6 Gm15521-201ENSMUST00000141752 835 ntTSL 2 BASIC3.32□□□□□ -1.88
Stag1Q9D3E6 Gm23470-201ENSMUST00000157129 120 ntBASIC3.32□□□□□ -1.88
Stag1Q9D3E6 Gm22858-201ENSMUST00000174972 76 ntBASIC3.32□□□□□ -1.88
Stag1Q9D3E6 Gm28008-201ENSMUST00000184021 186 ntBASIC3.32□□□□□ -1.88
Stag1Q9D3E6 Mrgprb1-203ENSMUST00000188918 435 ntTSL 3 BASIC3.32□□□□□ -1.88
Stag1Q9D3E6 Rgs1-208ENSMUST00000189061 3841 ntAPPRIS P1 TSL 1 (best) BASIC3.32□□□□□ -1.88
Stag1Q9D3E6 Gm37923-201ENSMUST00000191624 161 ntBASIC3.32□□□□□ -1.88
Stag1Q9D3E6 AL603834.1-201ENSMUST00000198372 121 ntBASIC3.32□□□□□ -1.88
Stag1Q9D3E6 Gm44468-201ENSMUST00000199516 105 ntBASIC3.32□□□□□ -1.88
Stag1Q9D3E6 Gm43600-201ENSMUST00000202134 223 ntBASIC3.32□□□□□ -1.88
Stag1Q9D3E6 Gm44024-201ENSMUST00000203008 476 ntBASIC3.32□□□□□ -1.88
Stag1Q9D3E6 AC160962.2-201ENSMUST00000224761 632 ntBASIC3.32□□□□□ -1.88
Stag1Q9D3E6 AW112010-201ENSMUST00000099676 770 ntTSL 1 (best) BASIC3.32□□□□□ -1.88
Stag1Q9D3E6 Olfr136-204ENSMUST00000214035 1925 ntAPPRIS P1 TSL 5 BASIC3.32□□□□□ -1.88
Stag1Q9D3E6 Gm3867-202ENSMUST00000181639 2007 ntTSL 2 BASIC3.32□□□□□ -1.88
Stag1Q9D3E6 Vmn1r83-202ENSMUST00000226701 2788 ntAPPRIS P1 BASIC3.32□□□□□ -1.88
Stag1Q9D3E6 Olfr1256-204ENSMUST00000215613 4543 ntAPPRIS P1 TSL 3 BASIC3.31□□□□□ -1.88
Stag1Q9D3E6 Gm42785-201ENSMUST00000202316 3835 ntBASIC3.31□□□□□ -1.88
Stag1Q9D3E6 Olfr896-ps1-202ENSMUST00000215219 2878 ntAPPRIS P1 TSL 5 BASIC3.31□□□□□ -1.88
Stag1Q9D3E6 Olfr1109-202ENSMUST00000214636 2483 ntAPPRIS P1 TSL 5 BASIC3.31□□□□□ -1.88
Stag1Q9D3E6 Gm14296-202ENSMUST00000108931 750 ntBASIC3.31□□□□□ -1.88
Stag1Q9D3E6 Rpl31-ps22-201ENSMUST00000117961 337 ntBASIC3.31□□□□□ -1.88
Stag1Q9D3E6 Gm16038-201ENSMUST00000159317 193 ntBASIC3.31□□□□□ -1.88
Stag1Q9D3E6 Ear-ps8-201ENSMUST00000161935 354 ntBASIC3.31□□□□□ -1.88
Stag1Q9D3E6 2210418O10Rik-204ENSMUST00000166464 750 ntBASIC3.31□□□□□ -1.88
Stag1Q9D3E6 Gm38311-201ENSMUST00000192945 165 ntBASIC3.31□□□□□ -1.88
Stag1Q9D3E6 Gm42570-201ENSMUST00000195937 292 ntBASIC3.31□□□□□ -1.88
Stag1Q9D3E6 Gm43914-201ENSMUST00000203592 594 ntBASIC3.31□□□□□ -1.88
Stag1Q9D3E6 Gm35077-201ENSMUST00000204999 275 ntTSL 3 BASIC3.31□□□□□ -1.88
Stag1Q9D3E6 AC188459.1-201ENSMUST00000216651 300 ntBASIC3.31□□□□□ -1.88
Stag1Q9D3E6 AC151833.1-201ENSMUST00000227752 574 ntBASIC3.31□□□□□ -1.88
Stag1Q9D3E6 Gm9174-201ENSMUST00000078149 255 ntBASIC3.31□□□□□ -1.88
Stag1Q9D3E6 Gm23453-201ENSMUST00000083326 106 ntBASIC3.31□□□□□ -1.88
Stag1Q9D3E6 Gm25512-201ENSMUST00000083863 107 ntBASIC3.31□□□□□ -1.88
Stag1Q9D3E6 Gm10234-201ENSMUST00000089304 60 ntAPPRIS P1 TSL 5 BASIC3.31□□□□□ -1.88
Stag1Q9D3E6 AC157570.1-201ENSMUST00000218052 3778 ntBASIC3.31□□□□□ -1.88
Stag1Q9D3E6 Vmn1r178-205ENSMUST00000227993 2518 ntAPPRIS P1 BASIC3.31□□□□□ -1.88
Stag1Q9D3E6 Gm37761-201ENSMUST00000194989 2098 ntBASIC3.31□□□□□ -1.88
Stag1Q9D3E6 CT009504.1-201ENSMUST00000218252 3330 ntBASIC3.31□□□□□ -1.88
Stag1Q9D3E6 Gm37296-201ENSMUST00000192728 2922 ntBASIC3.3□□□□□ -1.88
Stag1Q9D3E6 Ighv16-1-201ENSMUST00000103470 299 ntAPPRIS P1 BASIC3.3□□□□□ -1.88
Stag1Q9D3E6 Mir466k-201ENSMUST00000116774 122 ntBASIC3.3□□□□□ -1.88
Stag1Q9D3E6 Gm15844-201ENSMUST00000118016 576 ntBASIC3.3□□□□□ -1.88
Stag1Q9D3E6 Atp5k-ps2-201ENSMUST00000120437 210 ntBASIC3.3□□□□□ -1.88
Stag1Q9D3E6 Gm24922-201ENSMUST00000158511 102 ntBASIC3.3□□□□□ -1.88
Stag1Q9D3E6 4930518C09Rik-201ENSMUST00000172700 478 ntTSL 1 (best) BASIC3.3□□□□□ -1.88
Stag1Q9D3E6 Gm24799-201ENSMUST00000178431 79 ntBASIC3.3□□□□□ -1.88
Stag1Q9D3E6 Gm28848-201ENSMUST00000189984 168 ntBASIC3.3□□□□□ -1.88
Stag1Q9D3E6 Gm43540-201ENSMUST00000196320 3848 ntBASIC3.3□□□□□ -1.88
Stag1Q9D3E6 Serf1-201ENSMUST00000022145 601 ntAPPRIS P1 TSL 1 (best) BASIC3.3□□□□□ -1.88
Stag1Q9D3E6 Skint2-203ENSMUST00000106560 1678 ntAPPRIS ALT2 TSL 1 (best) BASIC3.3□□□□□ -1.88
Stag1Q9D3E6 Gm23142-201ENSMUST00000101848 105 ntBASIC3.29□□□□□ -1.88
Stag1Q9D3E6 Gm26240-201ENSMUST00000101893 105 ntBASIC3.29□□□□□ -1.88
Stag1Q9D3E6 Gm22782-201ENSMUST00000104082 132 ntBASIC3.29□□□□□ -1.88
Stag1Q9D3E6 Gm25269-201ENSMUST00000122601 104 ntBASIC3.29□□□□□ -1.88
Stag1Q9D3E6 Snord11-201ENSMUST00000158468 84 ntBASIC3.29□□□□□ -1.88
Stag1Q9D3E6 Mir3076-201ENSMUST00000175415 60 ntBASIC3.29□□□□□ -1.88
Stag1Q9D3E6 Gm44085-201ENSMUST00000205056 372 ntTSL 3 BASIC3.29□□□□□ -1.88
Stag1Q9D3E6 Gm44811-201ENSMUST00000209120 228 ntBASIC3.29□□□□□ -1.88
Stag1Q9D3E6 Gm32817-202ENSMUST00000210738 527 ntTSL 2 BASIC3.29□□□□□ -1.88
Stag1Q9D3E6 CAAA01090905.1-201ENSMUST00000219056 426 ntTSL 2 BASIC3.29□□□□□ -1.88
Stag1Q9D3E6 AC120555.1-201ENSMUST00000221020 222 ntTSL 5 BASIC3.29□□□□□ -1.88
Stag1Q9D3E6 Gm25793-201ENSMUST00000083287 107 ntBASIC3.29□□□□□ -1.88
Stag1Q9D3E6 Snord7-201ENSMUST00000083781 97 ntBASIC3.29□□□□□ -1.88
Stag1Q9D3E6 Gm12580-201ENSMUST00000127456 1751 ntTSL 1 (best) BASIC3.29□□□□□ -1.88
Stag1Q9D3E6 Olfr103-202ENSMUST00000173472 3079 ntAPPRIS P1 TSL 3 BASIC3.29□□□□□ -1.88
Stag1Q9D3E6 Gm19965-201ENSMUST00000179777 3030 ntAPPRIS P1 TSL 5 BASIC3.29□□□□□ -1.88
Stag1Q9D3E6 Gm20939-201ENSMUST00000108007 1572 ntAPPRIS P1 TSL 5 BASIC3.29□□□□□ -1.88
Retrieved 100 of 76,532 protein–RNA pairs in 110 ms