Protein–RNA interactions for Protein: Q9D0R4

Ddx56, Probable ATP-dependent RNA helicase DDX56, mousemouse

Known RBP Predictions only

Length 546 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ddx56Q9D0R4 Gm24152-201ENSMUST00000082764 163 ntBASIC3.17□□□□□ -1.9
Ddx56Q9D0R4 Gm23738-201ENSMUST00000082828 171 ntBASIC3.17□□□□□ -1.9
Ddx56Q9D0R4 Gm19965-201ENSMUST00000179777 3030 ntAPPRIS P1 TSL 5 BASIC3.17□□□□□ -1.9
Ddx56Q9D0R4 A630081D01Rik-201ENSMUST00000195842 1833 ntBASIC3.16□□□□□ -1.9
Ddx56Q9D0R4 Vmn1r172-202ENSMUST00000173101 9109 ntAPPRIS P1 TSL 1 (best) BASIC3.16□□□□□ -1.9
Ddx56Q9D0R4 AC157570.1-201ENSMUST00000218052 3778 ntBASIC3.16□□□□□ -1.9
Ddx56Q9D0R4 Gm26500-201ENSMUST00000101867 106 ntBASIC3.16□□□□□ -1.9
Ddx56Q9D0R4 Snord14c-201ENSMUST00000101927 86 ntBASIC3.16□□□□□ -1.9
Ddx56Q9D0R4 Gm24892-201ENSMUST00000122747 104 ntBASIC3.16□□□□□ -1.9
Ddx56Q9D0R4 Gm22961-201ENSMUST00000157964 106 ntBASIC3.16□□□□□ -1.9
Ddx56Q9D0R4 Gm24905-201ENSMUST00000158129 104 ntBASIC3.16□□□□□ -1.9
Ddx56Q9D0R4 Gm43406-201ENSMUST00000200356 334 ntBASIC3.16□□□□□ -1.9
Ddx56Q9D0R4 AC159632.1-201ENSMUST00000221808 317 ntTSL 1 (best) BASIC3.16□□□□□ -1.9
Ddx56Q9D0R4 Gm22685-201ENSMUST00000082848 106 ntBASIC3.16□□□□□ -1.9
Ddx56Q9D0R4 Gm10720-201ENSMUST00000099050 669 ntAPPRIS P1 TSL 5 BASIC3.16□□□□□ -1.9
Ddx56Q9D0R4 Olfr968-202ENSMUST00000216458 4630 ntAPPRIS P1 TSL 5 BASIC3.16□□□□□ -1.9
Ddx56Q9D0R4 Olfr1258-201ENSMUST00000102609 7007 ntAPPRIS P1 TSL 3 BASIC3.16□□□□□ -1.9
Ddx56Q9D0R4 Olfr1484-205ENSMUST00000216369 3764 ntTSL 5 BASIC3.15□□□□□ -1.9
Ddx56Q9D0R4 Gm10033-201ENSMUST00000072427 1813 ntBASIC3.15□□□□□ -1.91
Ddx56Q9D0R4 Gm22678-201ENSMUST00000116974 101 ntBASIC3.15□□□□□ -1.91
Ddx56Q9D0R4 Gm14774-201ENSMUST00000117857 536 ntBASIC3.15□□□□□ -1.91
Ddx56Q9D0R4 Gm15903-201ENSMUST00000155796 310 ntTSL 1 (best) BASIC3.15□□□□□ -1.91
Ddx56Q9D0R4 Gm23168-201ENSMUST00000157156 143 ntBASIC3.15□□□□□ -1.91
Ddx56Q9D0R4 Gm23759-201ENSMUST00000158351 268 ntBASIC3.15□□□□□ -1.91
Ddx56Q9D0R4 Gm25488-201ENSMUST00000158728 118 ntBASIC3.15□□□□□ -1.91
Ddx56Q9D0R4 Vmn2r-ps65-201ENSMUST00000173309 220 ntBASIC3.15□□□□□ -1.91
Ddx56Q9D0R4 Gm24308-201ENSMUST00000177773 114 ntBASIC3.15□□□□□ -1.91
Ddx56Q9D0R4 Gm10421-202ENSMUST00000186114 132 ntTSL 3 BASIC3.15□□□□□ -1.91
Ddx56Q9D0R4 Gm36368-201ENSMUST00000212026 461 ntAPPRIS P1 TSL 5 BASIC3.15□□□□□ -1.91
Ddx56Q9D0R4 AC155715.1-201ENSMUST00000213575 463 ntBASIC3.15□□□□□ -1.91
Ddx56Q9D0R4 Gm22739-201ENSMUST00000083437 160 ntBASIC3.15□□□□□ -1.91
Ddx56Q9D0R4 Zfp970-202ENSMUST00000108952 1569 ntAPPRIS P1 TSL 2 BASIC3.15□□□□□ -1.91
Ddx56Q9D0R4 Zfp953-201ENSMUST00000081582 4677 ntAPPRIS P1 TSL 1 (best) BASIC3.15□□□□□ -1.91
Ddx56Q9D0R4 Gm43540-201ENSMUST00000196320 3848 ntBASIC3.15□□□□□ -1.91
Ddx56Q9D0R4 Olfr789-202ENSMUST00000213992 4421 ntAPPRIS P1 TSL 5 BASIC3.15□□□□□ -1.91
Ddx56Q9D0R4 mt-Nd4-201ENSMUST00000082414 1378 ntAPPRIS P1 BASIC3.14□□□□□ -1.91
Ddx56Q9D0R4 Gm43879-201ENSMUST00000203811 3760 ntBASIC3.14□□□□□ -1.91
Ddx56Q9D0R4 Mir465b-1-201ENSMUST00000103940 79 ntBASIC3.14□□□□□ -1.91
Ddx56Q9D0R4 Mir465b-2-201ENSMUST00000104662 79 ntBASIC3.14□□□□□ -1.91
Ddx56Q9D0R4 Gm11115-201ENSMUST00000113255 54 ntAPPRIS P1 TSL 5 BASIC3.14□□□□□ -1.91
Ddx56Q9D0R4 Gm12647-201ENSMUST00000118977 265 ntBASIC3.14□□□□□ -1.91
Ddx56Q9D0R4 Gm15365-201ENSMUST00000122392 300 ntBASIC3.14□□□□□ -1.91
Ddx56Q9D0R4 n-R5s189-201ENSMUST00000122675 114 ntBASIC3.14□□□□□ -1.91
Ddx56Q9D0R4 Gm15561-201ENSMUST00000124326 540 ntTSL 3 BASIC3.14□□□□□ -1.91
Ddx56Q9D0R4 Gm14389-201ENSMUST00000140453 241 ntBASIC3.14□□□□□ -1.91
Ddx56Q9D0R4 Gm25012-201ENSMUST00000158396 164 ntBASIC3.14□□□□□ -1.91
Ddx56Q9D0R4 Gm22800-201ENSMUST00000175627 94 ntBASIC3.14□□□□□ -1.91
Ddx56Q9D0R4 Mir6399-201ENSMUST00000184050 84 ntBASIC3.14□□□□□ -1.91
Ddx56Q9D0R4 Ska2l-ps-201ENSMUST00000186208 360 ntBASIC3.14□□□□□ -1.91
Ddx56Q9D0R4 Igkv5-40-1-201ENSMUST00000196457 359 ntBASIC3.14□□□□□ -1.91
Ddx56Q9D0R4 Gm43521-201ENSMUST00000197838 255 ntBASIC3.14□□□□□ -1.91
Ddx56Q9D0R4 Gm43107-201ENSMUST00000198729 255 ntBASIC3.14□□□□□ -1.91
Ddx56Q9D0R4 Gm44157-201ENSMUST00000204720 410 ntBASIC3.14□□□□□ -1.91
Ddx56Q9D0R4 Ranbp2-201ENSMUST00000003310 9608 ntAPPRIS P1 TSL 5 BASIC3.14□□□□□ -1.91
Ddx56Q9D0R4 Gm37515-201ENSMUST00000193321 3817 ntBASIC3.13□□□□□ -1.91
Ddx56Q9D0R4 Gm22115-201ENSMUST00000103976 133 ntBASIC3.13□□□□□ -1.91
Ddx56Q9D0R4 Gm23923-201ENSMUST00000104108 133 ntBASIC3.13□□□□□ -1.91
Ddx56Q9D0R4 Mdga2-203ENSMUST00000113942 423 ntBASIC3.13□□□□□ -1.91
Ddx56Q9D0R4 Gm22713-201ENSMUST00000116895 130 ntBASIC3.13□□□□□ -1.91
Ddx56Q9D0R4 Gm13885-201ENSMUST00000117569 187 ntBASIC3.13□□□□□ -1.91
Ddx56Q9D0R4 Gm12235-201ENSMUST00000118596 170 ntBASIC3.13□□□□□ -1.91
Ddx56Q9D0R4 Gm13862-201ENSMUST00000121220 197 ntBASIC3.13□□□□□ -1.91
Ddx56Q9D0R4 Gm23381-201ENSMUST00000157676 94 ntBASIC3.13□□□□□ -1.91
Ddx56Q9D0R4 Gm26005-201ENSMUST00000158802 134 ntBASIC3.13□□□□□ -1.91
Ddx56Q9D0R4 B230216N24Rik-202ENSMUST00000159353 345 ntTSL 1 (best) BASIC3.13□□□□□ -1.91
Ddx56Q9D0R4 Mir5123-201ENSMUST00000177794 83 ntBASIC3.13□□□□□ -1.91
Ddx56Q9D0R4 Gm27796-201ENSMUST00000183863 261 ntBASIC3.13□□□□□ -1.91
Ddx56Q9D0R4 Gm36891-201ENSMUST00000191995 655 ntBASIC3.13□□□□□ -1.91
Ddx56Q9D0R4 Gm43978-201ENSMUST00000203491 451 ntBASIC3.13□□□□□ -1.91
Ddx56Q9D0R4 Gm44174-201ENSMUST00000205022 141 ntTSL 2 BASIC3.13□□□□□ -1.91
Ddx56Q9D0R4 Gm44794-201ENSMUST00000206550 411 ntBASIC3.13□□□□□ -1.91
Ddx56Q9D0R4 Gm46233-201ENSMUST00000217831 449 ntBASIC3.13□□□□□ -1.91
Ddx56Q9D0R4 Mir323-201ENSMUST00000083683 86 ntBASIC3.13□□□□□ -1.91
Ddx56Q9D0R4 Gm24764-201ENSMUST00000083686 199 ntBASIC3.13□□□□□ -1.91
Ddx56Q9D0R4 Nkain2-202ENSMUST00000092603 273 ntTSL 5 BASIC3.13□□□□□ -1.91
Ddx56Q9D0R4 Gm42675-201ENSMUST00000197552 4035 ntBASIC3.13□□□□□ -1.91
Ddx56Q9D0R4 Gm42639-201ENSMUST00000197061 1871 ntBASIC3.13□□□□□ -1.91
Ddx56Q9D0R4 Tex16-201ENSMUST00000038546 3972 ntAPPRIS P2 TSL 1 (best) BASIC3.12□□□□□ -1.91
Ddx56Q9D0R4 Mir542-201ENSMUST00000102186 85 ntBASIC3.12□□□□□ -1.91
Ddx56Q9D0R4 Gm9850-201ENSMUST00000117916 227 ntBASIC3.12□□□□□ -1.91
Ddx56Q9D0R4 Gm6071-201ENSMUST00000119561 440 ntBASIC3.12□□□□□ -1.91
Ddx56Q9D0R4 Gm16355-201ENSMUST00000128606 231 ntBASIC3.12□□□□□ -1.91
Ddx56Q9D0R4 Gm28744-201ENSMUST00000189939 340 ntBASIC3.12□□□□□ -1.91
Ddx56Q9D0R4 Gm23406-201ENSMUST00000082537 122 ntBASIC3.12□□□□□ -1.91
Ddx56Q9D0R4 Mir32-201ENSMUST00000083610 70 ntBASIC3.12□□□□□ -1.91
Ddx56Q9D0R4 Olfr606-202ENSMUST00000214631 2649 ntAPPRIS P1 TSL 5 BASIC3.12□□□□□ -1.91
Ddx56Q9D0R4 AC121844.2-201ENSMUST00000219067 2066 ntBASIC3.12□□□□□ -1.91
Ddx56Q9D0R4 Olfr726-204ENSMUST00000215105 1752 ntAPPRIS P1 TSL 5 BASIC3.11□□□□□ -1.91
Ddx56Q9D0R4 Gm25270-201ENSMUST00000122606 138 ntBASIC3.11□□□□□ -1.91
Ddx56Q9D0R4 Gm23232-201ENSMUST00000157300 105 ntBASIC3.11□□□□□ -1.91
Ddx56Q9D0R4 Gm29665-201ENSMUST00000191457 528 ntBASIC3.11□□□□□ -1.91
Ddx56Q9D0R4 Gm37713-201ENSMUST00000191746 198 ntBASIC3.11□□□□□ -1.91
Ddx56Q9D0R4 Gm37754-201ENSMUST00000194406 452 ntTSL 5 BASIC3.11□□□□□ -1.91
Ddx56Q9D0R4 Gm45296-201ENSMUST00000209625 205 ntBASIC3.11□□□□□ -1.91
Ddx56Q9D0R4 AC158622.1-201ENSMUST00000217107 230 ntBASIC3.11□□□□□ -1.91
Ddx56Q9D0R4 AC141895.1-201ENSMUST00000218141 273 ntBASIC3.11□□□□□ -1.91
Ddx56Q9D0R4 AC154576.2-202ENSMUST00000223916 688 ntBASIC3.11□□□□□ -1.91
Ddx56Q9D0R4 Gm24356-201ENSMUST00000082859 106 ntBASIC3.11□□□□□ -1.91
Ddx56Q9D0R4 Vmn1r13-203ENSMUST00000227298 5203 ntAPPRIS P1 BASIC3.11□□□□□ -1.91
Ddx56Q9D0R4 Vmn1r13-204ENSMUST00000227421 5235 ntAPPRIS P1 BASIC3.1□□□□□ -1.91
Retrieved 100 of 76,532 protein–RNA pairs in 85.3 ms