Protein–RNA interactions for Protein: Q9CWT6

Ddx28, Probable ATP-dependent RNA helicase DDX28, mousemouse

Known RBP Predictions only

Length 540 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ddx28Q9CWT6 Gm23202-201ENSMUST00000104376 129 ntBASIC2.37□□□□□ -2.03
Ddx28Q9CWT6 Gm15844-201ENSMUST00000118016 576 ntBASIC2.37□□□□□ -2.03
Ddx28Q9CWT6 Gm15986-201ENSMUST00000122153 400 ntBASIC2.37□□□□□ -2.03
Ddx28Q9CWT6 Dnal1-203ENSMUST00000136159 403 ntTSL 5 BASIC2.37□□□□□ -2.03
Ddx28Q9CWT6 Gm23331-201ENSMUST00000157423 108 ntBASIC2.37□□□□□ -2.03
Ddx28Q9CWT6 Gm26186-201ENSMUST00000157689 125 ntBASIC2.37□□□□□ -2.03
Ddx28Q9CWT6 Mir1927-201ENSMUST00000158579 109 ntBASIC2.37□□□□□ -2.03
Ddx28Q9CWT6 Gm20462-201ENSMUST00000172623 408 ntBASIC2.37□□□□□ -2.03
Ddx28Q9CWT6 Gm24084-201ENSMUST00000175173 137 ntBASIC2.37□□□□□ -2.03
Ddx28Q9CWT6 9230113P08Rik-202ENSMUST00000176153 414 ntAPPRIS P5 TSL 5 BASIC2.37□□□□□ -2.03
Ddx28Q9CWT6 Gm21798-201ENSMUST00000180105 261 ntAPPRIS P1 TSL 5 BASIC2.37□□□□□ -2.03
Ddx28Q9CWT6 Bsph2-ps-201ENSMUST00000183795 241 ntBASIC2.37□□□□□ -2.03
Ddx28Q9CWT6 Mir7081-201ENSMUST00000184490 75 ntBASIC2.37□□□□□ -2.03
Ddx28Q9CWT6 Gm28647-201ENSMUST00000188416 197 ntBASIC2.37□□□□□ -2.03
Ddx28Q9CWT6 Gm43600-201ENSMUST00000202134 223 ntBASIC2.37□□□□□ -2.03
Ddx28Q9CWT6 Gm44526-201ENSMUST00000204664 121 ntBASIC2.37□□□□□ -2.03
Ddx28Q9CWT6 1700072O05Rik-201ENSMUST00000204672 321 ntTSL 5 BASIC2.37□□□□□ -2.03
Ddx28Q9CWT6 Gm18346-201ENSMUST00000216782 325 ntBASIC2.37□□□□□ -2.03
Ddx28Q9CWT6 AC147240.1-201ENSMUST00000218767 431 ntBASIC2.37□□□□□ -2.03
Ddx28Q9CWT6 Gm7240-201ENSMUST00000220769 664 ntBASIC2.37□□□□□ -2.03
Ddx28Q9CWT6 Olfr497-201ENSMUST00000076406 945 ntAPPRIS P1 BASIC2.37□□□□□ -2.03
Ddx28Q9CWT6 Gm25796-201ENSMUST00000082645 163 ntBASIC2.37□□□□□ -2.03
Ddx28Q9CWT6 Gm23453-201ENSMUST00000083326 106 ntBASIC2.37□□□□□ -2.03
Ddx28Q9CWT6 Gm45557-201ENSMUST00000210004 1651 ntBASIC2.37□□□□□ -2.03
Ddx28Q9CWT6 Olfr1161-203ENSMUST00000217006 3647 ntAPPRIS P1 TSL 5 BASIC2.37□□□□□ -2.03
Ddx28Q9CWT6 Olfr1186-202ENSMUST00000215912 1850 ntAPPRIS P1 TSL 5 BASIC2.37□□□□□ -2.03
Ddx28Q9CWT6 Olfr136-204ENSMUST00000214035 1925 ntAPPRIS P1 TSL 5 BASIC2.36□□□□□ -2.03
Ddx28Q9CWT6 Vmn1r29-204ENSMUST00000228038 4520 ntAPPRIS P1 BASIC2.36□□□□□ -2.03
Ddx28Q9CWT6 Acer3-202ENSMUST00000120520 3964 ntTSL 1 (best) BASIC2.36□□□□□ -2.03
Ddx28Q9CWT6 Gm13396-201ENSMUST00000120617 271 ntBASIC2.36□□□□□ -2.03
Ddx28Q9CWT6 Gm27396-201ENSMUST00000157708 58 ntBASIC2.36□□□□□ -2.03
Ddx28Q9CWT6 2310075C17Rik-201ENSMUST00000161216 326 ntTSL 1 (best) BASIC2.36□□□□□ -2.03
Ddx28Q9CWT6 Ifi206-202ENSMUST00000169797 429 ntTSL 5 BASIC2.36□□□□□ -2.03
Ddx28Q9CWT6 4930518C09Rik-201ENSMUST00000172700 478 ntTSL 1 (best) BASIC2.36□□□□□ -2.03
Ddx28Q9CWT6 Gm17919-201ENSMUST00000173344 312 ntBASIC2.36□□□□□ -2.03
Ddx28Q9CWT6 Gm25528-201ENSMUST00000180264 132 ntBASIC2.36□□□□□ -2.03
Ddx28Q9CWT6 Mir6916-201ENSMUST00000184514 63 ntBASIC2.36□□□□□ -2.03
Ddx28Q9CWT6 Gm37923-201ENSMUST00000191624 161 ntBASIC2.36□□□□□ -2.03
Ddx28Q9CWT6 Olfr511-ps1-201ENSMUST00000207188 217 ntBASIC2.36□□□□□ -2.03
Ddx28Q9CWT6 AC158606.1-201ENSMUST00000220078 325 ntBASIC2.36□□□□□ -2.03
Ddx28Q9CWT6 AC132954.1-201ENSMUST00000221017 342 ntBASIC2.36□□□□□ -2.03
Ddx28Q9CWT6 AC163646.2-201ENSMUST00000227962 141 ntBASIC2.36□□□□□ -2.03
Ddx28Q9CWT6 AW554918-203ENSMUST00000100131 1684 ntTSL 5 BASIC2.36□□□□□ -2.03
Ddx28Q9CWT6 AC117199.1-201ENSMUST00000219940 3132 ntBASIC2.36□□□□□ -2.03
Ddx28Q9CWT6 9230113P08Rik-201ENSMUST00000176049 1987 ntAPPRIS ALT2 TSL 2 BASIC2.36□□□□□ -2.03
Ddx28Q9CWT6 Olfr1109-203ENSMUST00000217066 2384 ntAPPRIS P1 TSL 5 BASIC2.35□□□□□ -2.03
Ddx28Q9CWT6 Gm6954-201ENSMUST00000117416 225 ntBASIC2.35□□□□□ -2.03
Ddx28Q9CWT6 Scgb1b26-ps-201ENSMUST00000121845 291 ntBASIC2.35□□□□□ -2.03
Ddx28Q9CWT6 Gm26255-201ENSMUST00000122492 103 ntBASIC2.35□□□□□ -2.03
Ddx28Q9CWT6 Gm25270-201ENSMUST00000122606 138 ntBASIC2.35□□□□□ -2.03
Ddx28Q9CWT6 Gm14978-201ENSMUST00000129000 304 ntTSL 3 BASIC2.35□□□□□ -2.03
Ddx28Q9CWT6 Gm6956-201ENSMUST00000134724 546 ntBASIC2.35□□□□□ -2.03
Ddx28Q9CWT6 Gm25153-201ENSMUST00000157118 156 ntBASIC2.35□□□□□ -2.03
Ddx28Q9CWT6 Gm25454-201ENSMUST00000157947 315 ntBASIC2.35□□□□□ -2.03
Ddx28Q9CWT6 Gm24005-201ENSMUST00000158459 296 ntBASIC2.35□□□□□ -2.03
Ddx28Q9CWT6 H3f3aos-202ENSMUST00000159740 229 ntTSL 5 BASIC2.35□□□□□ -2.03
Ddx28Q9CWT6 Gm25476-201ENSMUST00000175125 185 ntBASIC2.35□□□□□ -2.03
Ddx28Q9CWT6 Gm27532-201ENSMUST00000183726 113 ntBASIC2.35□□□□□ -2.03
Ddx28Q9CWT6 Gm27761-201ENSMUST00000184091 131 ntBASIC2.35□□□□□ -2.03
Ddx28Q9CWT6 Gm37313-201ENSMUST00000191673 290 ntBASIC2.35□□□□□ -2.03
Ddx28Q9CWT6 Gm38311-201ENSMUST00000192945 165 ntBASIC2.35□□□□□ -2.03
Ddx28Q9CWT6 AC122465.2-201ENSMUST00000221774 354 ntBASIC2.35□□□□□ -2.03
Ddx28Q9CWT6 Prl-203ENSMUST00000224228 888 ntAPPRIS ALT2 BASIC2.35□□□□□ -2.03
Ddx28Q9CWT6 Gm25896-201ENSMUST00000083713 136 ntBASIC2.35□□□□□ -2.03
Ddx28Q9CWT6 Gm15088-201ENSMUST00000117973 1508 ntBASIC2.35□□□□□ -2.03
Ddx28Q9CWT6 Gm15098-201ENSMUST00000119036 1508 ntBASIC2.35□□□□□ -2.03
Ddx28Q9CWT6 Gm45257-201ENSMUST00000210301 3998 ntBASIC2.35□□□□□ -2.03
Ddx28Q9CWT6 Crisp1-201ENSMUST00000026498 1416 ntAPPRIS P1 TSL 1 (best) BASIC2.34□□□□□ -2.03
Ddx28Q9CWT6 Zfp988-201ENSMUST00000148762 2800 ntAPPRIS P1 TSL 5 BASIC2.34□□□□□ -2.03
Ddx28Q9CWT6 Vmn1r67-202ENSMUST00000226237 2352 ntAPPRIS ALT2 BASIC2.34□□□□□ -2.03
Ddx28Q9CWT6 Gm12550-201ENSMUST00000118478 329 ntBASIC2.34□□□□□ -2.03
Ddx28Q9CWT6 Gm26411-201ENSMUST00000157668 107 ntBASIC2.34□□□□□ -2.03
Ddx28Q9CWT6 Gm25671-201ENSMUST00000178612 105 ntBASIC2.34□□□□□ -2.03
Ddx28Q9CWT6 Hmga1b-202ENSMUST00000178955 120 ntBASIC2.34□□□□□ -2.03
Ddx28Q9CWT6 Gm23307-201ENSMUST00000179167 105 ntBASIC2.34□□□□□ -2.03
Ddx28Q9CWT6 Gm25286-201ENSMUST00000179790 105 ntBASIC2.34□□□□□ -2.03
Ddx28Q9CWT6 Ranbp2-ps2-201ENSMUST00000184379 370 ntBASIC2.34□□□□□ -2.03
Ddx28Q9CWT6 Gm43626-201ENSMUST00000198575 162 ntBASIC2.34□□□□□ -2.03
Ddx28Q9CWT6 Gm40810-201ENSMUST00000219149 253 ntBASIC2.34□□□□□ -2.03
Ddx28Q9CWT6 AC154521.1-201ENSMUST00000222635 330 ntBASIC2.34□□□□□ -2.03
Ddx28Q9CWT6 CT025602.1-201ENSMUST00000227281 382 ntBASIC2.34□□□□□ -2.03
Ddx28Q9CWT6 Gm25079-201ENSMUST00000082529 203 ntBASIC2.34□□□□□ -2.03
Ddx28Q9CWT6 Gm25199-201ENSMUST00000083095 104 ntBASIC2.34□□□□□ -2.03
Ddx28Q9CWT6 Olfr1316-201ENSMUST00000099596 945 ntAPPRIS P2 BASIC2.34□□□□□ -2.03
Ddx28Q9CWT6 Gm14588-201ENSMUST00000119895 172 ntBASIC2.33□□□□□ -2.04
Ddx28Q9CWT6 Gm11254-201ENSMUST00000122368 653 ntBASIC2.33□□□□□ -2.04
Ddx28Q9CWT6 Gm26214-201ENSMUST00000158581 107 ntBASIC2.33□□□□□ -2.04
Ddx28Q9CWT6 Gm22192-201ENSMUST00000175128 85 ntBASIC2.33□□□□□ -2.04
Ddx28Q9CWT6 Gm20718-201ENSMUST00000176058 259 ntBASIC2.33□□□□□ -2.04
Ddx28Q9CWT6 Gm9830-201ENSMUST00000178509 357 ntBASIC2.33□□□□□ -2.04
Ddx28Q9CWT6 Gm29397-201ENSMUST00000185205 333 ntBASIC2.33□□□□□ -2.04
Ddx28Q9CWT6 Gm37081-201ENSMUST00000192034 196 ntBASIC2.33□□□□□ -2.04
Ddx28Q9CWT6 Gm42570-201ENSMUST00000195937 292 ntBASIC2.33□□□□□ -2.04
Ddx28Q9CWT6 Gm44478-201ENSMUST00000204875 114 ntBASIC2.33□□□□□ -2.04
Ddx28Q9CWT6 Gm9318-201ENSMUST00000222444 438 ntBASIC2.33□□□□□ -2.04
Ddx28Q9CWT6 AC125223.1-203ENSMUST00000225304 498 ntBASIC2.33□□□□□ -2.04
Ddx28Q9CWT6 Gm25632-201ENSMUST00000083112 85 ntBASIC2.33□□□□□ -2.04
Ddx28Q9CWT6 Gm10192-201ENSMUST00000086672 327 ntAPPRIS P1 BASIC2.33□□□□□ -2.04
Ddx28Q9CWT6 Olfr1102-202ENSMUST00000214002 1806 ntAPPRIS P1 TSL 5 BASIC2.33□□□□□ -2.04
Ddx28Q9CWT6 Arhgap5-202ENSMUST00000217820 2332 ntTSL 5 BASIC2.33□□□□□ -2.04
Retrieved 100 of 76,532 protein–RNA pairs in 130.5 ms