Protein–RNA interactions for Protein: Q9CR29

Ccdc43, Coiled-coil domain-containing protein 43, mousemouse

Known RBP Predictions only

Length 222 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc43Q9CR29 Gm26427-201ENSMUST00000093648 107 ntBASIC2.19□□□□□ -2.06
Ccdc43Q9CR29 Gm22886-201ENSMUST00000093714 107 ntBASIC2.19□□□□□ -2.06
Ccdc43Q9CR29 Gm22170-201ENSMUST00000097247 107 ntBASIC2.19□□□□□ -2.06
Ccdc43Q9CR29 Olfr1448-203ENSMUST00000213713 4336 ntAPPRIS P1 TSL 5 BASIC2.19□□□□□ -2.06
Ccdc43Q9CR29 Gm15303-201ENSMUST00000118676 2624 ntBASIC2.18□□□□□ -2.06
Ccdc43Q9CR29 Olfr606-202ENSMUST00000214631 2649 ntAPPRIS P1 TSL 5 BASIC2.18□□□□□ -2.06
Ccdc43Q9CR29 Mir743b-201ENSMUST00000104751 77 ntBASIC2.18□□□□□ -2.06
Ccdc43Q9CR29 Gm5396-201ENSMUST00000121222 532 ntBASIC2.18□□□□□ -2.06
Ccdc43Q9CR29 n-R5s207-201ENSMUST00000122497 118 ntBASIC2.18□□□□□ -2.06
Ccdc43Q9CR29 Gm25052-201ENSMUST00000122661 158 ntBASIC2.18□□□□□ -2.06
Ccdc43Q9CR29 Gm24892-201ENSMUST00000122747 104 ntBASIC2.18□□□□□ -2.06
Ccdc43Q9CR29 Gm21885-201ENSMUST00000178891 327 ntBASIC2.18□□□□□ -2.06
Ccdc43Q9CR29 Gm27979-201ENSMUST00000185126 56 ntBASIC2.18□□□□□ -2.06
Ccdc43Q9CR29 Gm28740-201ENSMUST00000186142 215 ntBASIC2.18□□□□□ -2.06
Ccdc43Q9CR29 AC162387.1-201ENSMUST00000213369 213 ntBASIC2.18□□□□□ -2.06
Ccdc43Q9CR29 Gm40810-201ENSMUST00000219149 253 ntBASIC2.18□□□□□ -2.06
Ccdc43Q9CR29 AC134601.3-201ENSMUST00000221682 154 ntBASIC2.18□□□□□ -2.06
Ccdc43Q9CR29 AC149294.9-201ENSMUST00000227256 164 ntBASIC2.18□□□□□ -2.06
Ccdc43Q9CR29 Gm23453-201ENSMUST00000083326 106 ntBASIC2.18□□□□□ -2.06
Ccdc43Q9CR29 Olfr1316-201ENSMUST00000099596 945 ntAPPRIS P2 BASIC2.18□□□□□ -2.06
Ccdc43Q9CR29 Gm21750-201ENSMUST00000098874 1497 ntAPPRIS P1 BASIC2.18□□□□□ -2.06
Ccdc43Q9CR29 Gm13672-201ENSMUST00000117554 459 ntBASIC2.17□□□□□ -2.06
Ccdc43Q9CR29 Gm12941-201ENSMUST00000117934 220 ntBASIC2.17□□□□□ -2.06
Ccdc43Q9CR29 Gm11935-201ENSMUST00000118608 399 ntBASIC2.17□□□□□ -2.06
Ccdc43Q9CR29 Gm15632-201ENSMUST00000135936 246 ntTSL 1 (best) BASIC2.17□□□□□ -2.06
Ccdc43Q9CR29 Gm12865-201ENSMUST00000137353 326 ntTSL 2 BASIC2.17□□□□□ -2.06
Ccdc43Q9CR29 Gm24438-201ENSMUST00000157893 115 ntBASIC2.17□□□□□ -2.06
Ccdc43Q9CR29 Gm22841-201ENSMUST00000158443 62 ntBASIC2.17□□□□□ -2.06
Ccdc43Q9CR29 Gm7592-201ENSMUST00000160674 627 ntBASIC2.17□□□□□ -2.06
Ccdc43Q9CR29 Gm7953-201ENSMUST00000168278 469 ntBASIC2.17□□□□□ -2.06
Ccdc43Q9CR29 Gm5900-201ENSMUST00000179862 375 ntBASIC2.17□□□□□ -2.06
Ccdc43Q9CR29 Gm44938-201ENSMUST00000208614 427 ntBASIC2.17□□□□□ -2.06
Ccdc43Q9CR29 Gm16351-202ENSMUST00000209660 337 ntTSL 5 BASIC2.17□□□□□ -2.06
Ccdc43Q9CR29 AC124772.1-201ENSMUST00000221325 151 ntBASIC2.17□□□□□ -2.06
Ccdc43Q9CR29 AC133598.3-201ENSMUST00000224322 568 ntBASIC2.17□□□□□ -2.06
Ccdc43Q9CR29 Olfr385-201ENSMUST00000071553 939 ntAPPRIS P1 BASIC2.17□□□□□ -2.06
Ccdc43Q9CR29 Mir222-201ENSMUST00000083537 79 ntBASIC2.17□□□□□ -2.06
Ccdc43Q9CR29 Gm11991-201ENSMUST00000119652 1074 ntBASIC2.16□□□□□ -2.06
Ccdc43Q9CR29 Gm43439-201ENSMUST00000138710 322 ntTSL 3 BASIC2.16□□□□□ -2.06
Ccdc43Q9CR29 Gm25115-201ENSMUST00000157187 140 ntBASIC2.16□□□□□ -2.06
Ccdc43Q9CR29 Gm26393-201ENSMUST00000157625 129 ntBASIC2.16□□□□□ -2.06
Ccdc43Q9CR29 Gm16043-201ENSMUST00000160030 616 ntTSL 3 BASIC2.16□□□□□ -2.06
Ccdc43Q9CR29 Gm19932-201ENSMUST00000177033 313 ntBASIC2.16□□□□□ -2.06
Ccdc43Q9CR29 Gm23379-201ENSMUST00000180026 107 ntBASIC2.16□□□□□ -2.06
Ccdc43Q9CR29 Scgb2b17-202ENSMUST00000182640 420 ntAPPRIS ALT2 TSL 3 BASIC2.16□□□□□ -2.06
Ccdc43Q9CR29 Gm27226-201ENSMUST00000184676 511 ntTSL 2 BASIC2.16□□□□□ -2.06
Ccdc43Q9CR29 Gm28076-201ENSMUST00000188337 410 ntTSL 3 BASIC2.16□□□□□ -2.06
Ccdc43Q9CR29 Gm44128-201ENSMUST00000204909 219 ntBASIC2.16□□□□□ -2.06
Ccdc43Q9CR29 AC154552.7-201ENSMUST00000222824 156 ntBASIC2.16□□□□□ -2.06
Ccdc43Q9CR29 Gm24151-201ENSMUST00000082758 141 ntBASIC2.16□□□□□ -2.06
Ccdc43Q9CR29 Gm24035-201ENSMUST00000082867 107 ntBASIC2.16□□□□□ -2.06
Ccdc43Q9CR29 Gm43753-201ENSMUST00000196539 3309 ntBASIC2.16□□□□□ -2.06
Ccdc43Q9CR29 Gm45518-201ENSMUST00000210776 2583 ntTSL 1 (best) BASIC2.16□□□□□ -2.06
Ccdc43Q9CR29 Gm26077-201ENSMUST00000104064 123 ntBASIC2.15□□□□□ -2.07
Ccdc43Q9CR29 Gm26342-201ENSMUST00000104557 129 ntBASIC2.15□□□□□ -2.07
Ccdc43Q9CR29 Gm25269-201ENSMUST00000122601 104 ntBASIC2.15□□□□□ -2.07
Ccdc43Q9CR29 Gm23983-201ENSMUST00000157142 114 ntBASIC2.15□□□□□ -2.07
Ccdc43Q9CR29 Gm26149-201ENSMUST00000157432 108 ntBASIC2.15□□□□□ -2.07
Ccdc43Q9CR29 Gm24333-201ENSMUST00000175101 84 ntBASIC2.15□□□□□ -2.07
Ccdc43Q9CR29 C920009B18Rik-204ENSMUST00000181733 123 ntBASIC2.15□□□□□ -2.07
Ccdc43Q9CR29 Mir6917-201ENSMUST00000184111 61 ntBASIC2.15□□□□□ -2.07
Ccdc43Q9CR29 Mir6950-201ENSMUST00000184438 73 ntBASIC2.15□□□□□ -2.07
Ccdc43Q9CR29 Mir195b-201ENSMUST00000184814 97 ntBASIC2.15□□□□□ -2.07
Ccdc43Q9CR29 Gm42570-201ENSMUST00000195937 292 ntBASIC2.15□□□□□ -2.07
Ccdc43Q9CR29 Gm44482-201ENSMUST00000199232 103 ntBASIC2.15□□□□□ -2.07
Ccdc43Q9CR29 AL772265.1-201ENSMUST00000214379 305 ntBASIC2.15□□□□□ -2.07
Ccdc43Q9CR29 AC141895.1-201ENSMUST00000218141 273 ntBASIC2.15□□□□□ -2.07
Ccdc43Q9CR29 Olfr746-202ENSMUST00000218546 987 ntAPPRIS P1 TSL 5 BASIC2.15□□□□□ -2.07
Ccdc43Q9CR29 Gm18113-201ENSMUST00000220630 303 ntBASIC2.15□□□□□ -2.07
Ccdc43Q9CR29 Gm19441-201ENSMUST00000221545 330 ntBASIC2.15□□□□□ -2.07
Ccdc43Q9CR29 Mucl2-201ENSMUST00000037685 639 ntAPPRIS P2 TSL 1 (best) BASIC2.15□□□□□ -2.07
Ccdc43Q9CR29 Snord7-201ENSMUST00000083781 97 ntBASIC2.15□□□□□ -2.07
Ccdc43Q9CR29 Gm44114-201ENSMUST00000203270 2727 ntBASIC2.14□□□□□ -2.07
Ccdc43Q9CR29 Olfr1496-202ENSMUST00000209137 2394 ntAPPRIS ALT1 TSL 5 BASIC2.14□□□□□ -2.07
Ccdc43Q9CR29 Zfp273-201ENSMUST00000012725 2277 ntTSL 1 (best) BASIC2.14□□□□□ -2.07
Ccdc43Q9CR29 Tlr8-201ENSMUST00000049023 3158 ntAPPRIS P1 TSL 1 (best) BASIC2.14□□□□□ -2.07
Ccdc43Q9CR29 Gm22834-201ENSMUST00000102021 79 ntBASIC2.14□□□□□ -2.07
Ccdc43Q9CR29 n-R5s200-201ENSMUST00000104194 113 ntBASIC2.14□□□□□ -2.07
Ccdc43Q9CR29 Gm13153-201ENSMUST00000120969 637 ntBASIC2.14□□□□□ -2.07
Ccdc43Q9CR29 Gm24480-201ENSMUST00000157442 103 ntBASIC2.14□□□□□ -2.07
Ccdc43Q9CR29 Gm22727-201ENSMUST00000158090 116 ntBASIC2.14□□□□□ -2.07
Ccdc43Q9CR29 Gm27510-201ENSMUST00000158214 64 ntBASIC2.14□□□□□ -2.07
Ccdc43Q9CR29 Gm25956-201ENSMUST00000175115 217 ntBASIC2.14□□□□□ -2.07
Ccdc43Q9CR29 Gm25642-201ENSMUST00000175137 66 ntBASIC2.14□□□□□ -2.07
Ccdc43Q9CR29 Gm24084-201ENSMUST00000175173 137 ntBASIC2.14□□□□□ -2.07
Ccdc43Q9CR29 Mir6399-201ENSMUST00000184050 84 ntBASIC2.14□□□□□ -2.07
Ccdc43Q9CR29 Gm29073-201ENSMUST00000185563 664 ntBASIC2.14□□□□□ -2.07
Ccdc43Q9CR29 Gm28597-201ENSMUST00000187664 666 ntBASIC2.14□□□□□ -2.07
Ccdc43Q9CR29 Gm28494-201ENSMUST00000187687 562 ntTSL 5 BASIC2.14□□□□□ -2.07
Ccdc43Q9CR29 Gm29165-201ENSMUST00000190655 664 ntBASIC2.14□□□□□ -2.07
Ccdc43Q9CR29 Gm29211-201ENSMUST00000191470 664 ntBASIC2.14□□□□□ -2.07
Ccdc43Q9CR29 Trbv7-201ENSMUST00000193339 402 ntBASIC2.14□□□□□ -2.07
Ccdc43Q9CR29 CT030687.1-201ENSMUST00000221854 162 ntBASIC2.14□□□□□ -2.07
Ccdc43Q9CR29 AC129085.5-201ENSMUST00000225468 400 ntBASIC2.14□□□□□ -2.07
Ccdc43Q9CR29 Gm43484-201ENSMUST00000198333 5966 ntBASIC2.14□□□□□ -2.07
Ccdc43Q9CR29 Gm19194-201ENSMUST00000192015 3774 ntBASIC2.13□□□□□ -2.07
Ccdc43Q9CR29 Igkv17-121-201ENSMUST00000103315 350 ntAPPRIS ALT2 BASIC2.13□□□□□ -2.07
Ccdc43Q9CR29 Gm15067-201ENSMUST00000119534 156 ntBASIC2.13□□□□□ -2.07
Ccdc43Q9CR29 Gm26345-201ENSMUST00000157534 120 ntBASIC2.13□□□□□ -2.07
Ccdc43Q9CR29 Gm22338-201ENSMUST00000157715 129 ntBASIC2.13□□□□□ -2.07
Retrieved 100 of 76,532 protein–RNA pairs in 88.1 ms