Protein–RNA interactions for Protein: Q99NB9

Sf3b1, Splicing factor 3B subunit 1, mousemouse

Known RBP Predictions only

Length 1,304 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sf3b1Q99NB9 AC157017.1-201ENSMUST00000220148 364 ntBASIC1.91□□□□□ -2.1
Sf3b1Q99NB9 AC159709.1-201ENSMUST00000220445 349 ntBASIC1.91□□□□□ -2.1
Sf3b1Q99NB9 Gm39473-201ENSMUST00000223498 522 ntTSL 3 BASIC1.91□□□□□ -2.1
Sf3b1Q99NB9 Gm25853-201ENSMUST00000082793 132 ntBASIC1.91□□□□□ -2.1
Sf3b1Q99NB9 Gm24035-201ENSMUST00000082867 107 ntBASIC1.91□□□□□ -2.1
Sf3b1Q99NB9 Klra3-201ENSMUST00000088017 984 ntAPPRIS P1 TSL 1 (best) BASIC1.91□□□□□ -2.1
Sf3b1Q99NB9 Olfr921-203ENSMUST00000217114 4120 ntAPPRIS P1 TSL 2 BASIC1.91□□□□□ -2.1
Sf3b1Q99NB9 Olfr1442-203ENSMUST00000208494 3593 ntAPPRIS P1 TSL 3 BASIC1.91□□□□□ -2.1
Sf3b1Q99NB9 Zc3h14-201ENSMUST00000021399 1430 ntTSL 1 (best) BASIC1.91□□□□□ -2.1
Sf3b1Q99NB9 Olfr711-203ENSMUST00000216335 4724 ntAPPRIS P1 TSL 5 BASIC1.91□□□□□ -2.1
Sf3b1Q99NB9 Gm15162-201ENSMUST00000119325 283 ntBASIC1.91□□□□□ -2.1
Sf3b1Q99NB9 Rhox11-ps1-201ENSMUST00000121945 387 ntBASIC1.91□□□□□ -2.1
Sf3b1Q99NB9 Gm14402-201ENSMUST00000122217 508 ntBASIC1.91□□□□□ -2.1
Sf3b1Q99NB9 Gm26393-201ENSMUST00000157625 129 ntBASIC1.91□□□□□ -2.1
Sf3b1Q99NB9 Gm25012-201ENSMUST00000158396 164 ntBASIC1.91□□□□□ -2.1
Sf3b1Q99NB9 Gm24388-201ENSMUST00000177872 107 ntBASIC1.91□□□□□ -2.1
Sf3b1Q99NB9 Gm24638-201ENSMUST00000179807 132 ntBASIC1.91□□□□□ -2.1
Sf3b1Q99NB9 Gm27957-201ENSMUST00000184054 127 ntBASIC1.91□□□□□ -2.1
Sf3b1Q99NB9 Mir6950-201ENSMUST00000184438 73 ntBASIC1.91□□□□□ -2.1
Sf3b1Q99NB9 Gm28585-201ENSMUST00000187587 442 ntTSL 5 BASIC1.91□□□□□ -2.1
Sf3b1Q99NB9 Gm20937-202ENSMUST00000189084 811 ntTSL 1 (best) BASIC1.91□□□□□ -2.1
Sf3b1Q99NB9 Gm43739-201ENSMUST00000198294 307 ntBASIC1.91□□□□□ -2.1
Sf3b1Q99NB9 Olfr821-201ENSMUST00000054364 933 ntAPPRIS P1 BASIC1.91□□□□□ -2.1
Sf3b1Q99NB9 Gm25636-201ENSMUST00000082666 133 ntBASIC1.91□□□□□ -2.1
Sf3b1Q99NB9 Gm25475-201ENSMUST00000082825 180 ntBASIC1.91□□□□□ -2.1
Sf3b1Q99NB9 Mir29c-201ENSMUST00000083614 88 ntBASIC1.91□□□□□ -2.1
Sf3b1Q99NB9 Vmn1r178-202ENSMUST00000226450 2880 ntAPPRIS P1 BASIC1.9□□□□□ -2.1
Sf3b1Q99NB9 Skint5-202ENSMUST00000169631 4497 ntAPPRIS P5 TSL 1 (best) BASIC1.9□□□□□ -2.11
Sf3b1Q99NB9 Gm14390-201ENSMUST00000117505 1695 ntBASIC1.9□□□□□ -2.11
Sf3b1Q99NB9 Gm14293-201ENSMUST00000118528 577 ntBASIC1.9□□□□□ -2.11
Sf3b1Q99NB9 Gm22985-201ENSMUST00000122754 116 ntBASIC1.9□□□□□ -2.11
Sf3b1Q99NB9 Gm11192-201ENSMUST00000127017 151 ntTSL 1 (best) BASIC1.9□□□□□ -2.11
Sf3b1Q99NB9 Gm12162-202ENSMUST00000129432 127 ntTSL 5 BASIC1.9□□□□□ -2.11
Sf3b1Q99NB9 Gm24438-201ENSMUST00000157893 115 ntBASIC1.9□□□□□ -2.11
Sf3b1Q99NB9 Gm22841-201ENSMUST00000158443 62 ntBASIC1.9□□□□□ -2.11
Sf3b1Q99NB9 Mir6995-201ENSMUST00000183658 71 ntBASIC1.9□□□□□ -2.11
Sf3b1Q99NB9 Gm27385-201ENSMUST00000184747 104 ntBASIC1.9□□□□□ -2.11
Sf3b1Q99NB9 Gm28597-201ENSMUST00000187664 666 ntBASIC1.9□□□□□ -2.11
Sf3b1Q99NB9 Gm37162-201ENSMUST00000191708 551 ntBASIC1.9□□□□□ -2.11
Sf3b1Q99NB9 Igkv13-55-1-201ENSMUST00000200400 308 ntBASIC1.9□□□□□ -2.11
Sf3b1Q99NB9 Olfr1482-ps1-201ENSMUST00000207181 178 ntBASIC1.9□□□□□ -2.11
Sf3b1Q99NB9 Gm17990-201ENSMUST00000211728 553 ntBASIC1.9□□□□□ -2.11
Sf3b1Q99NB9 AC147240.1-201ENSMUST00000218767 431 ntBASIC1.9□□□□□ -2.11
Sf3b1Q99NB9 AC122393.1-201ENSMUST00000226570 319 ntBASIC1.9□□□□□ -2.11
Sf3b1Q99NB9 Gm22062-201ENSMUST00000082563 107 ntBASIC1.9□□□□□ -2.11
Sf3b1Q99NB9 Gm25813-201ENSMUST00000082748 191 ntBASIC1.9□□□□□ -2.11
Sf3b1Q99NB9 Defb41-201ENSMUST00000088463 467 ntTSL 1 (best) BASIC1.9□□□□□ -2.11
Sf3b1Q99NB9 Agmo-201ENSMUST00000049874 2423 ntAPPRIS P1 TSL 1 (best) BASIC1.89□□□□□ -2.11
Sf3b1Q99NB9 Gm19194-201ENSMUST00000192015 3774 ntBASIC1.89□□□□□ -2.11
Sf3b1Q99NB9 Olfr792-202ENSMUST00000215436 2113 ntAPPRIS P1 TSL 5 BASIC1.89□□□□□ -2.11
Sf3b1Q99NB9 Olfr857-203ENSMUST00000217450 2271 ntTSL 3 BASIC1.89□□□□□ -2.11
Sf3b1Q99NB9 n-R5s207-201ENSMUST00000122497 118 ntBASIC1.89□□□□□ -2.11
Sf3b1Q99NB9 Gm25052-201ENSMUST00000122661 158 ntBASIC1.89□□□□□ -2.11
Sf3b1Q99NB9 Gm15281-201ENSMUST00000125181 351 ntBASIC1.89□□□□□ -2.11
Sf3b1Q99NB9 Gm26278-201ENSMUST00000157098 132 ntBASIC1.89□□□□□ -2.11
Sf3b1Q99NB9 Ear-ps4-201ENSMUST00000166834 450 ntBASIC1.89□□□□□ -2.11
Sf3b1Q99NB9 Gm22800-201ENSMUST00000175627 94 ntBASIC1.89□□□□□ -2.11
Sf3b1Q99NB9 Gm23379-201ENSMUST00000180026 107 ntBASIC1.89□□□□□ -2.11
Sf3b1Q99NB9 Mir6355-201ENSMUST00000183687 106 ntBASIC1.89□□□□□ -2.11
Sf3b1Q99NB9 Gm28058-201ENSMUST00000186421 264 ntBASIC1.89□□□□□ -2.11
Sf3b1Q99NB9 Gm29350-201ENSMUST00000189141 541 ntBASIC1.89□□□□□ -2.11
Sf3b1Q99NB9 Gm19261-201ENSMUST00000189628 539 ntTSL 2 BASIC1.89□□□□□ -2.11
Sf3b1Q99NB9 Gm44336-201ENSMUST00000203696 468 ntBASIC1.89□□□□□ -2.11
Sf3b1Q99NB9 Gm44693-201ENSMUST00000208141 460 ntTSL 3 BASIC1.89□□□□□ -2.11
Sf3b1Q99NB9 AC162387.1-201ENSMUST00000213369 213 ntBASIC1.89□□□□□ -2.11
Sf3b1Q99NB9 Serf1-201ENSMUST00000022145 601 ntAPPRIS P1 TSL 1 (best) BASIC1.89□□□□□ -2.11
Sf3b1Q99NB9 AC168062.3-201ENSMUST00000227025 165 ntBASIC1.89□□□□□ -2.11
Sf3b1Q99NB9 Olfr307-202ENSMUST00000213705 4498 ntAPPRIS P1 TSL 5 BASIC1.88□□□□□ -2.11
Sf3b1Q99NB9 Vmn1r67-202ENSMUST00000226237 2352 ntAPPRIS ALT2 BASIC1.88□□□□□ -2.11
Sf3b1Q99NB9 Gm14624-201ENSMUST00000117746 192 ntBASIC1.88□□□□□ -2.11
Sf3b1Q99NB9 Gm12926-201ENSMUST00000121158 409 ntBASIC1.88□□□□□ -2.11
Sf3b1Q99NB9 Gm15529-201ENSMUST00000121833 994 ntBASIC1.88□□□□□ -2.11
Sf3b1Q99NB9 Gm24076-201ENSMUST00000158179 94 ntBASIC1.88□□□□□ -2.11
Sf3b1Q99NB9 Gm26157-201ENSMUST00000158974 126 ntBASIC1.88□□□□□ -2.11
Sf3b1Q99NB9 Mir28b-201ENSMUST00000175399 80 ntBASIC1.88□□□□□ -2.11
Sf3b1Q99NB9 Gm24656-201ENSMUST00000177548 132 ntBASIC1.88□□□□□ -2.11
Sf3b1Q99NB9 Gm25933-201ENSMUST00000178943 108 ntBASIC1.88□□□□□ -2.11
Sf3b1Q99NB9 Gm27878-201ENSMUST00000184000 106 ntBASIC1.88□□□□□ -2.11
Sf3b1Q99NB9 Gm27624-201ENSMUST00000185047 177 ntBASIC1.88□□□□□ -2.11
Sf3b1Q99NB9 Trav5d-2-201ENSMUST00000196107 275 ntBASIC1.88□□□□□ -2.11
Sf3b1Q99NB9 Gm44387-201ENSMUST00000196298 145 ntBASIC1.88□□□□□ -2.11
Sf3b1Q99NB9 Trav5n-2-201ENSMUST00000197136 275 ntBASIC1.88□□□□□ -2.11
Sf3b1Q99NB9 Gm43021-201ENSMUST00000198692 337 ntTSL 3 BASIC1.88□□□□□ -2.11
Sf3b1Q99NB9 Gm44446-201ENSMUST00000204864 255 ntBASIC1.88□□□□□ -2.11
Sf3b1Q99NB9 Gm45386-201ENSMUST00000210194 218 ntBASIC1.88□□□□□ -2.11
Sf3b1Q99NB9 AC153864.2-201ENSMUST00000220424 292 ntBASIC1.88□□□□□ -2.11
Sf3b1Q99NB9 AC192333.2-201ENSMUST00000224771 196 ntBASIC1.88□□□□□ -2.11
Sf3b1Q99NB9 Gm23462-201ENSMUST00000083264 104 ntBASIC1.88□□□□□ -2.11
Sf3b1Q99NB9 Nkain2-202ENSMUST00000092603 273 ntTSL 5 BASIC1.88□□□□□ -2.11
Sf3b1Q99NB9 Gm14327-201ENSMUST00000099001 192 ntTSL 5 BASIC1.88□□□□□ -2.11
Sf3b1Q99NB9 Olfr1218-202ENSMUST00000213609 3760 ntAPPRIS P1 TSL 5 BASIC1.88□□□□□ -2.11
Sf3b1Q99NB9 Gm37903-201ENSMUST00000192122 2381 ntBASIC1.88□□□□□ -2.11
Sf3b1Q99NB9 Olfr1094-202ENSMUST00000217509 1693 ntAPPRIS P1 TSL 5 BASIC1.88□□□□□ -2.11
Sf3b1Q99NB9 Gm21750-201ENSMUST00000098874 1497 ntAPPRIS P1 BASIC1.87□□□□□ -2.11
Sf3b1Q99NB9 Gm38388-201ENSMUST00000195569 1430 ntBASIC1.87□□□□□ -2.11
Sf3b1Q99NB9 Mir301b-201ENSMUST00000102333 97 ntBASIC1.87□□□□□ -2.11
Sf3b1Q99NB9 Gm12235-201ENSMUST00000118596 170 ntBASIC1.87□□□□□ -2.11
Sf3b1Q99NB9 Gm22328-201ENSMUST00000158074 112 ntBASIC1.87□□□□□ -2.11
Sf3b1Q99NB9 Gm24573-201ENSMUST00000175499 112 ntBASIC1.87□□□□□ -2.11
Sf3b1Q99NB9 Gm23523-201ENSMUST00000180190 107 ntBASIC1.87□□□□□ -2.11
Retrieved 100 of 76,532 protein–RNA pairs in 94.5 ms