Protein–RNA interactions for Protein: Q8VHY0

Cspg4, Chondroitin sulfate proteoglycan 4, mousemouse

Predictions only

Length 2,327 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cspg4Q8VHY0 Snord32a-201ENSMUST00000083285 83 ntBASIC0.32□□□□□ -2.36
Cspg4Q8VHY0 Gm26175-201ENSMUST00000083794 131 ntBASIC0.32□□□□□ -2.36
Cspg4Q8VHY0 Mir544-201ENSMUST00000103813 78 ntBASIC0.31□□□□□ -2.36
Cspg4Q8VHY0 Mir208b-201ENSMUST00000104735 77 ntBASIC0.31□□□□□ -2.36
Cspg4Q8VHY0 Gm14785-201ENSMUST00000120185 539 ntBASIC0.31□□□□□ -2.36
Cspg4Q8VHY0 Gm24385-201ENSMUST00000122694 350 ntBASIC0.31□□□□□ -2.36
Cspg4Q8VHY0 Klrc1-204ENSMUST00000169545 676 ntAPPRIS ALT2 TSL 1 (best) BASIC0.31□□□□□ -2.36
Cspg4Q8VHY0 Mir7683-201ENSMUST00000183842 61 ntBASIC0.31□□□□□ -2.36
Cspg4Q8VHY0 Gm29613-201ENSMUST00000185846 313 ntBASIC0.31□□□□□ -2.36
Cspg4Q8VHY0 Gm29544-201ENSMUST00000188860 313 ntBASIC0.31□□□□□ -2.36
Cspg4Q8VHY0 Gm28808-201ENSMUST00000190978 313 ntBASIC0.31□□□□□ -2.36
Cspg4Q8VHY0 9430083B18Rik-201ENSMUST00000191908 863 ntBASIC0.31□□□□□ -2.36
Cspg4Q8VHY0 Gm37650-201ENSMUST00000193570 248 ntTSL 1 (best) BASIC0.31□□□□□ -2.36
Cspg4Q8VHY0 Gm44482-201ENSMUST00000199232 103 ntBASIC0.31□□□□□ -2.36
Cspg4Q8VHY0 AC160863.1-201ENSMUST00000218412 317 ntBASIC0.31□□□□□ -2.36
Cspg4Q8VHY0 Gm45941-202ENSMUST00000223144 389 ntTSL 2 BASIC0.31□□□□□ -2.36
Cspg4Q8VHY0 Gm24091-201ENSMUST00000082550 83 ntBASIC0.31□□□□□ -2.36
Cspg4Q8VHY0 Snora41-201ENSMUST00000082668 132 ntBASIC0.31□□□□□ -2.36
Cspg4Q8VHY0 Gm23246-201ENSMUST00000083371 67 ntBASIC0.31□□□□□ -2.36
Cspg4Q8VHY0 Gm23711-201ENSMUST00000083856 83 ntBASIC0.31□□□□□ -2.36
Cspg4Q8VHY0 Gm24056-201ENSMUST00000158617 146 ntBASIC0.31□□□□□ -2.36
Cspg4Q8VHY0 Gm21815-201ENSMUST00000178213 664 ntBASIC0.31□□□□□ -2.36
Cspg4Q8VHY0 Gm28843-201ENSMUST00000189198 678 ntBASIC0.31□□□□□ -2.36
Cspg4Q8VHY0 Gm29546-201ENSMUST00000191171 678 ntBASIC0.31□□□□□ -2.36
Cspg4Q8VHY0 Gm44564-201ENSMUST00000207985 180 ntBASIC0.31□□□□□ -2.36
Cspg4Q8VHY0 Gm10264-201ENSMUST00000220589 429 ntBASIC0.31□□□□□ -2.36
Cspg4Q8VHY0 AC132446.1-201ENSMUST00000222655 226 ntBASIC0.31□□□□□ -2.36
Cspg4Q8VHY0 AC155241.1-201ENSMUST00000222709 415 ntTSL 5 BASIC0.31□□□□□ -2.36
Cspg4Q8VHY0 AC173482.2-201ENSMUST00000224044 750 ntBASIC0.31□□□□□ -2.36
Cspg4Q8VHY0 Olfr810-201ENSMUST00000091986 1006 ntAPPRIS P1 BASIC0.31□□□□□ -2.36
Cspg4Q8VHY0 Gm25805-201ENSMUST00000122788 108 ntBASIC0.3□□□□□ -2.36
Cspg4Q8VHY0 Gm13782-201ENSMUST00000149515 352 ntTSL 3 BASIC0.3□□□□□ -2.36
Cspg4Q8VHY0 Gm26275-201ENSMUST00000157101 268 ntBASIC0.3□□□□□ -2.36
Cspg4Q8VHY0 Gm24963-201ENSMUST00000157916 144 ntBASIC0.3□□□□□ -2.36
Cspg4Q8VHY0 Snord11-201ENSMUST00000158468 84 ntBASIC0.3□□□□□ -2.36
Cspg4Q8VHY0 Gm7654-201ENSMUST00000186738 683 ntBASIC0.3□□□□□ -2.36
Cspg4Q8VHY0 Gm29647-201ENSMUST00000188795 666 ntBASIC0.3□□□□□ -2.36
Cspg4Q8VHY0 Gm28504-201ENSMUST00000190977 666 ntBASIC0.3□□□□□ -2.36
Cspg4Q8VHY0 Trbv24-201ENSMUST00000194614 347 ntBASIC0.3□□□□□ -2.36
Cspg4Q8VHY0 Gm42958-201ENSMUST00000197595 318 ntBASIC0.3□□□□□ -2.36
Cspg4Q8VHY0 Gm34411-201ENSMUST00000201180 280 ntTSL 3 BASIC0.3□□□□□ -2.36
Cspg4Q8VHY0 Gm45438-201ENSMUST00000210242 564 ntBASIC0.3□□□□□ -2.36
Cspg4Q8VHY0 Gm24256-201ENSMUST00000083696 84 ntBASIC0.3□□□□□ -2.36
Cspg4Q8VHY0 Gm12730-201ENSMUST00000125277 291 ntTSL 5 BASIC0.3□□□□□ -2.36
Cspg4Q8VHY0 Gm24837-201ENSMUST00000158683 81 ntBASIC0.3□□□□□ -2.36
Cspg4Q8VHY0 Gm24229-201ENSMUST00000158830 118 ntBASIC0.3□□□□□ -2.36
Cspg4Q8VHY0 Gm26195-201ENSMUST00000175035 101 ntBASIC0.3□□□□□ -2.36
Cspg4Q8VHY0 Mir1264-201ENSMUST00000175381 86 ntBASIC0.3□□□□□ -2.36
Cspg4Q8VHY0 Mir6364-201ENSMUST00000183396 86 ntBASIC0.3□□□□□ -2.36
Cspg4Q8VHY0 Gm37193-201ENSMUST00000193087 513 ntBASIC0.3□□□□□ -2.36
Cspg4Q8VHY0 4930590L20Rik-201ENSMUST00000193820 553 ntTSL 1 (best) BASIC0.3□□□□□ -2.36
Cspg4Q8VHY0 Gm29950-201ENSMUST00000195273 237 ntBASIC0.3□□□□□ -2.36
Cspg4Q8VHY0 Gm45439-201ENSMUST00000211723 359 ntBASIC0.3□□□□□ -2.36
Cspg4Q8VHY0 Gm46103-201ENSMUST00000217614 341 ntBASIC0.3□□□□□ -2.36
Cspg4Q8VHY0 Gm26439-201ENSMUST00000082592 106 ntBASIC0.3□□□□□ -2.36
Cspg4Q8VHY0 Gm14445-201ENSMUST00000117051 1484 ntBASIC0.29□□□□□ -2.36
Cspg4Q8VHY0 Gm12449-201ENSMUST00000117572 234 ntBASIC0.29□□□□□ -2.36
Cspg4Q8VHY0 Gm24846-201ENSMUST00000158033 108 ntBASIC0.29□□□□□ -2.36
Cspg4Q8VHY0 Gm22768-201ENSMUST00000158366 153 ntBASIC0.29□□□□□ -2.36
Cspg4Q8VHY0 Gm23339-201ENSMUST00000158962 139 ntBASIC0.29□□□□□ -2.36
Cspg4Q8VHY0 Lilrb4a-205ENSMUST00000217705 1142 ntTSL 1 (best) BASIC0.29□□□□□ -2.36
Cspg4Q8VHY0 AC152951.1-201ENSMUST00000218907 266 ntBASIC0.29□□□□□ -2.36
Cspg4Q8VHY0 Gm22454-201ENSMUST00000082583 107 ntBASIC0.29□□□□□ -2.36
Cspg4Q8VHY0 Mir216a-201ENSMUST00000083605 72 ntBASIC0.29□□□□□ -2.36
Cspg4Q8VHY0 Gm24271-201ENSMUST00000102327 111 ntBASIC0.29□□□□□ -2.36
Cspg4Q8VHY0 Gm24588-201ENSMUST00000116696 83 ntBASIC0.29□□□□□ -2.36
Cspg4Q8VHY0 Gm13080-201ENSMUST00000120556 420 ntBASIC0.29□□□□□ -2.36
Cspg4Q8VHY0 Gm11240-201ENSMUST00000142047 751 ntTSL 1 (best) BASIC0.29□□□□□ -2.36
Cspg4Q8VHY0 Gm23983-201ENSMUST00000157142 114 ntBASIC0.29□□□□□ -2.36
Cspg4Q8VHY0 Gm7953-201ENSMUST00000168278 469 ntBASIC0.29□□□□□ -2.36
Cspg4Q8VHY0 Gm37743-201ENSMUST00000194645 376 ntBASIC0.29□□□□□ -2.36
Cspg4Q8VHY0 AC166060.1-201ENSMUST00000213509 425 ntTSL 5 BASIC0.29□□□□□ -2.36
Cspg4Q8VHY0 Rhox11-ps2-201ENSMUST00000117962 451 ntBASIC0.28□□□□□ -2.36
Cspg4Q8VHY0 Gm24221-201ENSMUST00000158833 313 ntBASIC0.28□□□□□ -2.36
Cspg4Q8VHY0 Mir7667-201ENSMUST00000183866 63 ntBASIC0.28□□□□□ -2.36
Cspg4Q8VHY0 Gm27402-201ENSMUST00000183890 120 ntBASIC0.28□□□□□ -2.36
Cspg4Q8VHY0 Gm5329-201ENSMUST00000186898 463 ntBASIC0.28□□□□□ -2.36
Cspg4Q8VHY0 Gm38074-201ENSMUST00000193467 145 ntTSL 5 BASIC0.28□□□□□ -2.36
Cspg4Q8VHY0 Obox4-ps25-201ENSMUST00000199090 210 ntBASIC0.28□□□□□ -2.36
Cspg4Q8VHY0 Olfr581-ps1-201ENSMUST00000209214 556 ntBASIC0.28□□□□□ -2.36
Cspg4Q8VHY0 AC131085.1-201ENSMUST00000224746 656 ntBASIC0.28□□□□□ -2.36
Cspg4Q8VHY0 AC154328.1-201ENSMUST00000225875 307 ntBASIC0.28□□□□□ -2.36
Cspg4Q8VHY0 AC112935.1-201ENSMUST00000227603 250 ntBASIC0.28□□□□□ -2.36
Cspg4Q8VHY0 Gm10542-201ENSMUST00000097586 273 ntAPPRIS P1 TSL 5 BASIC0.28□□□□□ -2.36
Cspg4Q8VHY0 Gm13184-201ENSMUST00000149932 626 ntTSL 3 BASIC0.27□□□□□ -2.37
Cspg4Q8VHY0 Gm16354-201ENSMUST00000155376 150 ntBASIC0.27□□□□□ -2.37
Cspg4Q8VHY0 Gm24747-201ENSMUST00000157835 87 ntBASIC0.27□□□□□ -2.37
Cspg4Q8VHY0 Gm22252-201ENSMUST00000179316 79 ntBASIC0.27□□□□□ -2.37
Cspg4Q8VHY0 D030025E07Rik-205ENSMUST00000198478 418 ntTSL 3 BASIC0.27□□□□□ -2.37
Cspg4Q8VHY0 Rpl31-ps1-201ENSMUST00000085128 378 ntBASIC0.27□□□□□ -2.37
Cspg4Q8VHY0 Sult2a-ps3-201ENSMUST00000117899 428 ntBASIC0.27□□□□□ -2.37
Cspg4Q8VHY0 Gm6025-201ENSMUST00000121517 201 ntBASIC0.27□□□□□ -2.37
Cspg4Q8VHY0 Hmgb3-ps-201ENSMUST00000162465 601 ntBASIC0.27□□□□□ -2.37
Cspg4Q8VHY0 Gm25020-201ENSMUST00000178071 107 ntBASIC0.27□□□□□ -2.37
Cspg4Q8VHY0 Gm26870-202ENSMUST00000181572 1143 ntTSL 5 BASIC0.27□□□□□ -2.37
Cspg4Q8VHY0 Gm44465-201ENSMUST00000199536 114 ntBASIC0.27□□□□□ -2.37
Cspg4Q8VHY0 Gm17987-201ENSMUST00000206902 603 ntBASIC0.27□□□□□ -2.37
Cspg4Q8VHY0 Gm18268-201ENSMUST00000208445 943 ntBASIC0.27□□□□□ -2.37
Cspg4Q8VHY0 Gm3333-202ENSMUST00000221763 1044 ntBASIC0.27□□□□□ -2.37
Cspg4Q8VHY0 AC162934.3-201ENSMUST00000223015 841 ntBASIC0.27□□□□□ -2.37
Retrieved 100 of 76,532 protein–RNA pairs in 80.8 ms