Protein–RNA interactions for Protein: Q8K445

Clrn1, Clarin-1, mousemouse

Predictions only

Length 232 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Clrn1Q8K445 Gm10161-201ENSMUST00000091506 204 ntBASIC3.13□□□□□ -1.91
Clrn1Q8K445 Cyp3a41a-201ENSMUST00000094111 2060 ntAPPRIS P1 TSL 1 (best) BASIC3.13□□□□□ -1.91
Clrn1Q8K445 Gm37061-201ENSMUST00000195066 3243 ntBASIC3.12□□□□□ -1.91
Clrn1Q8K445 Gm37788-201ENSMUST00000193958 2705 ntBASIC3.12□□□□□ -1.91
Clrn1Q8K445 Olfr1463-202ENSMUST00000207246 2315 ntAPPRIS P1 TSL 2 BASIC3.12□□□□□ -1.91
Clrn1Q8K445 Gm23256-201ENSMUST00000102235 110 ntBASIC3.12□□□□□ -1.91
Clrn1Q8K445 Tcrg-V4-201ENSMUST00000103554 426 ntAPPRIS P1 BASIC3.12□□□□□ -1.91
Clrn1Q8K445 Traj24-201ENSMUST00000103717 63 ntAPPRIS P1 BASIC3.12□□□□□ -1.91
Clrn1Q8K445 Gm26140-201ENSMUST00000103807 110 ntBASIC3.12□□□□□ -1.91
Clrn1Q8K445 Gm14652-201ENSMUST00000118479 235 ntBASIC3.12□□□□□ -1.91
Clrn1Q8K445 Gm5937-201ENSMUST00000119715 643 ntBASIC3.12□□□□□ -1.91
Clrn1Q8K445 Gm23234-201ENSMUST00000157304 134 ntBASIC3.12□□□□□ -1.91
Clrn1Q8K445 Gm23326-201ENSMUST00000157419 105 ntBASIC3.12□□□□□ -1.91
Clrn1Q8K445 Gm22380-201ENSMUST00000157479 95 ntBASIC3.12□□□□□ -1.91
Clrn1Q8K445 Gm27396-201ENSMUST00000157708 58 ntBASIC3.12□□□□□ -1.91
Clrn1Q8K445 Gm25863-201ENSMUST00000158249 329 ntBASIC3.12□□□□□ -1.91
Clrn1Q8K445 Mir5127-201ENSMUST00000175295 71 ntBASIC3.12□□□□□ -1.91
Clrn1Q8K445 Obox4-ps37-201ENSMUST00000177223 276 ntBASIC3.12□□□□□ -1.91
Clrn1Q8K445 Gm22908-201ENSMUST00000177620 110 ntBASIC3.12□□□□□ -1.91
Clrn1Q8K445 Gm29574-201ENSMUST00000186226 696 ntBASIC3.12□□□□□ -1.91
Clrn1Q8K445 Gm29005-201ENSMUST00000186773 320 ntBASIC3.12□□□□□ -1.91
Clrn1Q8K445 Gm28159-201ENSMUST00000190296 696 ntBASIC3.12□□□□□ -1.91
Clrn1Q8K445 Gm44385-201ENSMUST00000198781 81 ntBASIC3.12□□□□□ -1.91
Clrn1Q8K445 Tnfrsf23-203ENSMUST00000208017 544 ntTSL 3 BASIC3.12□□□□□ -1.91
Clrn1Q8K445 AC121942.2-201ENSMUST00000223824 600 ntBASIC3.12□□□□□ -1.91
Clrn1Q8K445 AC124524.1-201ENSMUST00000225833 181 ntBASIC3.12□□□□□ -1.91
Clrn1Q8K445 Gm24966-201ENSMUST00000082443 79 ntBASIC3.12□□□□□ -1.91
Clrn1Q8K445 Gm42482-201ENSMUST00000198904 1947 ntBASIC3.12□□□□□ -1.91
Clrn1Q8K445 Cp-202ENSMUST00000091309 4029 ntAPPRIS P3 TSL 1 (best) BASIC3.12□□□□□ -1.91
Clrn1Q8K445 CT010444.1-201ENSMUST00000219963 3845 ntBASIC3.12□□□□□ -1.91
Clrn1Q8K445 Zfp534-201ENSMUST00000117638 2885 ntAPPRIS P1 TSL 2 BASIC3.11□□□□□ -1.91
Clrn1Q8K445 Olfr894-202ENSMUST00000212992 3234 ntAPPRIS ALT2 TSL 5 BASIC3.11□□□□□ -1.91
Clrn1Q8K445 Olfr1033-205ENSMUST00000218397 3973 ntAPPRIS P1 TSL 5 BASIC3.11□□□□□ -1.91
Clrn1Q8K445 Hhla1-201ENSMUST00000100584 2262 ntAPPRIS P1 TSL 1 (best) BASIC3.11□□□□□ -1.91
Clrn1Q8K445 Igkv2-109-201ENSMUST00000103322 374 ntAPPRIS P1 BASIC3.11□□□□□ -1.91
Clrn1Q8K445 n-R5s219-201ENSMUST00000104328 132 ntBASIC3.11□□□□□ -1.91
Clrn1Q8K445 Gm25728-201ENSMUST00000104525 159 ntBASIC3.11□□□□□ -1.91
Clrn1Q8K445 Snord19-201ENSMUST00000104609 76 ntBASIC3.11□□□□□ -1.91
Clrn1Q8K445 Gm22883-201ENSMUST00000157376 106 ntBASIC3.11□□□□□ -1.91
Clrn1Q8K445 Gm24601-201ENSMUST00000157970 143 ntBASIC3.11□□□□□ -1.91
Clrn1Q8K445 Gm22532-201ENSMUST00000158822 140 ntBASIC3.11□□□□□ -1.91
Clrn1Q8K445 Gm17528-201ENSMUST00000171026 239 ntBASIC3.11□□□□□ -1.91
Clrn1Q8K445 Gm26928-201ENSMUST00000182674 572 ntBASIC3.11□□□□□ -1.91
Clrn1Q8K445 Mir6914-201ENSMUST00000184999 69 ntBASIC3.11□□□□□ -1.91
Clrn1Q8K445 Gm37479-201ENSMUST00000194169 3841 ntBASIC3.11□□□□□ -1.91
Clrn1Q8K445 Gm44429-201ENSMUST00000203542 186 ntBASIC3.11□□□□□ -1.91
Clrn1Q8K445 AC161054.1-201ENSMUST00000214319 184 ntBASIC3.11□□□□□ -1.91
Clrn1Q8K445 Gm35835-202ENSMUST00000216984 3350 ntTSL 1 (best) BASIC3.11□□□□□ -1.91
Clrn1Q8K445 Olfr17-202ENSMUST00000210568 3666 ntAPPRIS P1 TSL 5 BASIC3.11□□□□□ -1.91
Clrn1Q8K445 Olfr681-204ENSMUST00000215564 4487 ntAPPRIS P1 TSL 5 BASIC3.11□□□□□ -1.91
Clrn1Q8K445 Dst-211ENSMUST00000183034 23201 ntAPPRIS ALT2 TSL 5 BASIC3.11□□□□□ -1.91
Clrn1Q8K445 Olfr577-203ENSMUST00000215237 3144 ntAPPRIS P1 TSL 5 BASIC3.1□□□□□ -1.91
Clrn1Q8K445 Vmn1r19-201ENSMUST00000089830 2255 ntAPPRIS P1 BASIC3.1□□□□□ -1.91
Clrn1Q8K445 Olfr592-203ENSMUST00000218618 5978 ntTSL 5 BASIC3.1□□□□□ -1.91
Clrn1Q8K445 Tfpi-203ENSMUST00000111711 3968 ntTSL 5 BASIC3.1□□□□□ -1.91
Clrn1Q8K445 Olfr1369-ps1-202ENSMUST00000213326 3707 ntAPPRIS P1 TSL 5 BASIC3.1□□□□□ -1.91
Clrn1Q8K445 AC153967.1-201ENSMUST00000219333 3190 ntBASIC3.1□□□□□ -1.91
Clrn1Q8K445 Igkv4-57-201ENSMUST00000103357 352 ntAPPRIS P1 BASIC3.1□□□□□ -1.91
Clrn1Q8K445 Gm12162-202ENSMUST00000129432 127 ntTSL 5 BASIC3.1□□□□□ -1.91
Clrn1Q8K445 Rpl31-ps14-201ENSMUST00000143596 378 ntBASIC3.1□□□□□ -1.91
Clrn1Q8K445 Gm23466-201ENSMUST00000157133 106 ntBASIC3.1□□□□□ -1.91
Clrn1Q8K445 Krtap27-1-201ENSMUST00000165580 646 ntAPPRIS P1 BASIC3.1□□□□□ -1.91
Clrn1Q8K445 Mir7667-201ENSMUST00000183866 63 ntBASIC3.1□□□□□ -1.91
Clrn1Q8K445 Gm27761-201ENSMUST00000184091 131 ntBASIC3.1□□□□□ -1.91
Clrn1Q8K445 Gm28641-201ENSMUST00000187783 335 ntTSL 5 BASIC3.1□□□□□ -1.91
Clrn1Q8K445 Gm29167-201ENSMUST00000190024 377 ntBASIC3.1□□□□□ -1.91
Clrn1Q8K445 AC161758.2-201ENSMUST00000228513 218 ntBASIC3.1□□□□□ -1.91
Clrn1Q8K445 Gm24533-201ENSMUST00000083138 196 ntBASIC3.1□□□□□ -1.91
Clrn1Q8K445 Gm23462-201ENSMUST00000083264 104 ntBASIC3.1□□□□□ -1.91
Clrn1Q8K445 Gm24164-201ENSMUST00000093663 104 ntBASIC3.1□□□□□ -1.91
Clrn1Q8K445 Vmn1r13-204ENSMUST00000227421 5235 ntAPPRIS P1 BASIC3.09□□□□□ -1.91
Clrn1Q8K445 Olfr59-204ENSMUST00000214048 3363 ntAPPRIS P1 TSL 2 BASIC3.09□□□□□ -1.91
Clrn1Q8K445 Vmn2r37-201ENSMUST00000072787 3081 ntAPPRIS P1 TSL 1 (best) BASIC3.09□□□□□ -1.91
Clrn1Q8K445 Olfr1404-202ENSMUST00000216556 3305 ntAPPRIS P1 TSL 5 BASIC3.09□□□□□ -1.91
Clrn1Q8K445 Trbv15-201ENSMUST00000103273 370 ntAPPRIS P1 BASIC3.09□□□□□ -1.91
Clrn1Q8K445 Gm14215-201ENSMUST00000120578 221 ntBASIC3.09□□□□□ -1.91
Clrn1Q8K445 Gm6079-201ENSMUST00000121356 404 ntBASIC3.09□□□□□ -1.91
Clrn1Q8K445 Gm22337-201ENSMUST00000157721 132 ntBASIC3.09□□□□□ -1.91
Clrn1Q8K445 Gm25977-201ENSMUST00000158697 85 ntBASIC3.09□□□□□ -1.91
Clrn1Q8K445 Gm22192-201ENSMUST00000175128 85 ntBASIC3.09□□□□□ -1.91
Clrn1Q8K445 Gm17067-202ENSMUST00000180131 123 ntBASIC3.09□□□□□ -1.91
Clrn1Q8K445 Gm43220-201ENSMUST00000199299 282 ntBASIC3.09□□□□□ -1.91
Clrn1Q8K445 Igkv8-31-201ENSMUST00000200040 372 ntBASIC3.09□□□□□ -1.91
Clrn1Q8K445 AC157476.1-201ENSMUST00000215555 169 ntBASIC3.09□□□□□ -1.91
Clrn1Q8K445 AC155923.1-201ENSMUST00000215676 356 ntBASIC3.09□□□□□ -1.91
Clrn1Q8K445 AC154636.2-201ENSMUST00000222538 161 ntBASIC3.09□□□□□ -1.91
Clrn1Q8K445 AC167669.4-201ENSMUST00000225967 140 ntBASIC3.09□□□□□ -1.91
Clrn1Q8K445 Snord82-201ENSMUST00000082889 70 ntBASIC3.09□□□□□ -1.91
Clrn1Q8K445 Gm25632-201ENSMUST00000083112 85 ntBASIC3.09□□□□□ -1.91
Clrn1Q8K445 Olr1-201ENSMUST00000032265 3572 ntAPPRIS P3 TSL 1 (best) BASIC3.09□□□□□ -1.92
Clrn1Q8K445 Gm18337-201ENSMUST00000219023 5762 ntBASIC3.09□□□□□ -1.92
Clrn1Q8K445 Ifi213-202ENSMUST00000150649 2748 ntAPPRIS ALT2 TSL 5 BASIC3.08□□□□□ -1.92
Clrn1Q8K445 Olfr346-202ENSMUST00000213258 4104 ntAPPRIS P1 TSL 5 BASIC3.08□□□□□ -1.92
Clrn1Q8K445 Gm23013-201ENSMUST00000104146 106 ntBASIC3.08□□□□□ -1.92
Clrn1Q8K445 Gm24892-201ENSMUST00000122747 104 ntBASIC3.08□□□□□ -1.92
Clrn1Q8K445 Gm22097-201ENSMUST00000157929 278 ntBASIC3.08□□□□□ -1.92
Clrn1Q8K445 Gm24930-201ENSMUST00000158315 83 ntBASIC3.08□□□□□ -1.92
Clrn1Q8K445 Gm27271-201ENSMUST00000183509 170 ntBASIC3.08□□□□□ -1.92
Clrn1Q8K445 Mir6408-201ENSMUST00000183643 91 ntBASIC3.08□□□□□ -1.92
Clrn1Q8K445 Gm28155-201ENSMUST00000191066 151 ntBASIC3.08□□□□□ -1.92
Retrieved 100 of 76,532 protein–RNA pairs in 90.8 ms