Protein–RNA interactions for Protein: Q8CEI3

Ccdc28a, Coiled-coil domain-containing 28A, mousemouse

Predictions only

Length 192 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc28aQ8CEI3 Gm22047-201ENSMUST00000179176 94 ntBASIC1.15□□□□□ -2.23
Ccdc28aQ8CEI3 Gm21894-201ENSMUST00000179631 546 ntBASIC1.15□□□□□ -2.23
Ccdc28aQ8CEI3 Gm24306-201ENSMUST00000180229 79 ntBASIC1.15□□□□□ -2.23
Ccdc28aQ8CEI3 Gm27659-201ENSMUST00000183472 98 ntBASIC1.15□□□□□ -2.23
Ccdc28aQ8CEI3 Gm18357-201ENSMUST00000188184 580 ntBASIC1.15□□□□□ -2.23
Ccdc28aQ8CEI3 Gm20896-202ENSMUST00000188585 921 ntAPPRIS P1 TSL 1 (best) BASIC1.15□□□□□ -2.23
Ccdc28aQ8CEI3 Gm28189-201ENSMUST00000190085 571 ntTSL 3 BASIC1.15□□□□□ -2.23
Ccdc28aQ8CEI3 Gm43427-201ENSMUST00000198188 331 ntBASIC1.15□□□□□ -2.23
Ccdc28aQ8CEI3 Gm42475-201ENSMUST00000201212 295 ntBASIC1.15□□□□□ -2.23
Ccdc28aQ8CEI3 Gm35077-201ENSMUST00000204999 275 ntTSL 3 BASIC1.15□□□□□ -2.23
Ccdc28aQ8CEI3 Gm45268-201ENSMUST00000210046 370 ntBASIC1.15□□□□□ -2.23
Ccdc28aQ8CEI3 AC153957.1-201ENSMUST00000215235 229 ntBASIC1.15□□□□□ -2.23
Ccdc28aQ8CEI3 AC167192.4-201ENSMUST00000224087 993 ntBASIC1.15□□□□□ -2.23
Ccdc28aQ8CEI3 Olfr307-203ENSMUST00000217494 4515 ntAPPRIS P1 TSL 5 BASIC1.14□□□□□ -2.23
Ccdc28aQ8CEI3 Gpr174-202ENSMUST00000117310 3536 ntAPPRIS P1 TSL 1 (best) BASIC1.14□□□□□ -2.23
Ccdc28aQ8CEI3 Defa-ps13-201ENSMUST00000120695 204 ntBASIC1.14□□□□□ -2.23
Ccdc28aQ8CEI3 Gm25784-201ENSMUST00000122524 81 ntBASIC1.14□□□□□ -2.23
Ccdc28aQ8CEI3 Gm22074-201ENSMUST00000158595 113 ntBASIC1.14□□□□□ -2.23
Ccdc28aQ8CEI3 Gm23196-201ENSMUST00000158806 107 ntBASIC1.14□□□□□ -2.23
Ccdc28aQ8CEI3 Gm21827-201ENSMUST00000178247 423 ntBASIC1.14□□□□□ -2.23
Ccdc28aQ8CEI3 Gm24168-201ENSMUST00000178825 107 ntBASIC1.14□□□□□ -2.23
Ccdc28aQ8CEI3 Mir6381-201ENSMUST00000183426 87 ntBASIC1.14□□□□□ -2.23
Ccdc28aQ8CEI3 Gm27419-201ENSMUST00000184576 109 ntBASIC1.14□□□□□ -2.23
Ccdc28aQ8CEI3 Gm28054-201ENSMUST00000187280 872 ntTSL 3 BASIC1.14□□□□□ -2.23
Ccdc28aQ8CEI3 6430573P05Rik-201ENSMUST00000192562 508 ntTSL 5 BASIC1.14□□□□□ -2.23
Ccdc28aQ8CEI3 Gm37910-201ENSMUST00000194770 217 ntTSL 5 BASIC1.14□□□□□ -2.23
Ccdc28aQ8CEI3 Gm10297-201ENSMUST00000207136 651 ntBASIC1.14□□□□□ -2.23
Ccdc28aQ8CEI3 Gm44654-201ENSMUST00000208052 329 ntBASIC1.14□□□□□ -2.23
Ccdc28aQ8CEI3 Gm29817-201ENSMUST00000210098 172 ntBASIC1.14□□□□□ -2.23
Ccdc28aQ8CEI3 Defa-ps13-202ENSMUST00000212360 204 ntTSL 1 (best) BASIC1.14□□□□□ -2.23
Ccdc28aQ8CEI3 AC239878.2-201ENSMUST00000224048 464 ntBASIC1.14□□□□□ -2.23
Ccdc28aQ8CEI3 CT010506.2-201ENSMUST00000225618 183 ntBASIC1.14□□□□□ -2.23
Ccdc28aQ8CEI3 Zfp934-201ENSMUST00000082203 993 ntTSL 5 BASIC1.14□□□□□ -2.23
Ccdc28aQ8CEI3 Gm37096-201ENSMUST00000192317 2058 ntBASIC1.14□□□□□ -2.23
Ccdc28aQ8CEI3 Gm26624-201ENSMUST00000181486 3769 ntTSL 5 BASIC1.13□□□□□ -2.23
Ccdc28aQ8CEI3 Gm381-201ENSMUST00000117443 2037 ntBASIC1.13□□□□□ -2.23
Ccdc28aQ8CEI3 Mir687-201ENSMUST00000102166 89 ntBASIC1.13□□□□□ -2.23
Ccdc28aQ8CEI3 Gm22591-201ENSMUST00000104243 106 ntBASIC1.13□□□□□ -2.23
Ccdc28aQ8CEI3 Gm23336-201ENSMUST00000117023 123 ntBASIC1.13□□□□□ -2.23
Ccdc28aQ8CEI3 Gm25325-201ENSMUST00000122559 86 ntBASIC1.13□□□□□ -2.23
Ccdc28aQ8CEI3 Gm13976-201ENSMUST00000154367 479 ntTSL 3 BASIC1.13□□□□□ -2.23
Ccdc28aQ8CEI3 Gm24910-201ENSMUST00000157289 272 ntBASIC1.13□□□□□ -2.23
Ccdc28aQ8CEI3 Gm23752-201ENSMUST00000157584 115 ntBASIC1.13□□□□□ -2.23
Ccdc28aQ8CEI3 Mir1967-201ENSMUST00000157789 82 ntBASIC1.13□□□□□ -2.23
Ccdc28aQ8CEI3 Gm22537-201ENSMUST00000158172 199 ntBASIC1.13□□□□□ -2.23
Ccdc28aQ8CEI3 Gm22075-201ENSMUST00000158599 192 ntBASIC1.13□□□□□ -2.23
Ccdc28aQ8CEI3 Gm22076-201ENSMUST00000158601 84 ntBASIC1.13□□□□□ -2.23
Ccdc28aQ8CEI3 Gm23777-201ENSMUST00000158994 259 ntBASIC1.13□□□□□ -2.23
Ccdc28aQ8CEI3 Gm22800-201ENSMUST00000175627 94 ntBASIC1.13□□□□□ -2.23
Ccdc28aQ8CEI3 Gm23269-201ENSMUST00000178701 107 ntBASIC1.13□□□□□ -2.23
Ccdc28aQ8CEI3 Gm27517-201ENSMUST00000184347 236 ntBASIC1.13□□□□□ -2.23
Ccdc28aQ8CEI3 Gm28474-201ENSMUST00000188501 315 ntBASIC1.13□□□□□ -2.23
Ccdc28aQ8CEI3 Gm17771-201ENSMUST00000194477 1147 ntBASIC1.13□□□□□ -2.23
Ccdc28aQ8CEI3 Gm44990-201ENSMUST00000203922 217 ntBASIC1.13□□□□□ -2.23
Ccdc28aQ8CEI3 Olfr795-ps1-201ENSMUST00000205245 763 ntBASIC1.13□□□□□ -2.23
Ccdc28aQ8CEI3 Olfr192-203ENSMUST00000206214 1054 ntAPPRIS P1 TSL 5 BASIC1.13□□□□□ -2.23
Ccdc28aQ8CEI3 AC192616.3-201ENSMUST00000220797 1124 ntBASIC1.13□□□□□ -2.23
Ccdc28aQ8CEI3 AC163357.1-201ENSMUST00000220847 233 ntBASIC1.13□□□□□ -2.23
Ccdc28aQ8CEI3 AC154521.1-201ENSMUST00000222635 330 ntBASIC1.13□□□□□ -2.23
Ccdc28aQ8CEI3 AC102291.2-201ENSMUST00000228083 367 ntBASIC1.13□□□□□ -2.23
Ccdc28aQ8CEI3 Gm24045-201ENSMUST00000083113 98 ntBASIC1.13□□□□□ -2.23
Ccdc28aQ8CEI3 Gm26493-201ENSMUST00000083155 136 ntBASIC1.13□□□□□ -2.23
Ccdc28aQ8CEI3 Gm26263-201ENSMUST00000083281 164 ntBASIC1.13□□□□□ -2.23
Ccdc28aQ8CEI3 Defb41-201ENSMUST00000088463 467 ntTSL 1 (best) BASIC1.13□□□□□ -2.23
Ccdc28aQ8CEI3 Crisp1-201ENSMUST00000026498 1416 ntAPPRIS P1 TSL 1 (best) BASIC1.13□□□□□ -2.23
Ccdc28aQ8CEI3 BC022960-201ENSMUST00000119987 1815 ntBASIC1.12□□□□□ -2.23
Ccdc28aQ8CEI3 Mir301b-201ENSMUST00000102333 97 ntBASIC1.12□□□□□ -2.23
Ccdc28aQ8CEI3 Mir190b-201ENSMUST00000104803 80 ntBASIC1.12□□□□□ -2.23
Ccdc28aQ8CEI3 Gm14399-202ENSMUST00000108929 813 ntTSL 5 BASIC1.12□□□□□ -2.23
Ccdc28aQ8CEI3 Gm4732-201ENSMUST00000118778 473 ntBASIC1.12□□□□□ -2.23
Ccdc28aQ8CEI3 Gm11606-201ENSMUST00000120706 617 ntBASIC1.12□□□□□ -2.23
Ccdc28aQ8CEI3 Gm12162-202ENSMUST00000129432 127 ntTSL 5 BASIC1.12□□□□□ -2.23
Ccdc28aQ8CEI3 Gm26102-201ENSMUST00000157251 284 ntBASIC1.12□□□□□ -2.23
Ccdc28aQ8CEI3 Rpl30-ps2-201ENSMUST00000160070 291 ntBASIC1.12□□□□□ -2.23
Ccdc28aQ8CEI3 Mir6419-201ENSMUST00000184784 113 ntBASIC1.12□□□□□ -2.23
Ccdc28aQ8CEI3 Gm28434-201ENSMUST00000187738 500 ntAPPRIS P1 TSL 5 BASIC1.12□□□□□ -2.23
Ccdc28aQ8CEI3 Gm43510-201ENSMUST00000197922 353 ntBASIC1.12□□□□□ -2.23
Ccdc28aQ8CEI3 Gm42164-201ENSMUST00000198881 379 ntBASIC1.12□□□□□ -2.23
Ccdc28aQ8CEI3 Gm43529-201ENSMUST00000199178 412 ntBASIC1.12□□□□□ -2.23
Ccdc28aQ8CEI3 Gm44482-201ENSMUST00000199232 103 ntBASIC1.12□□□□□ -2.23
Ccdc28aQ8CEI3 Gm43810-201ENSMUST00000201018 232 ntBASIC1.12□□□□□ -2.23
Ccdc28aQ8CEI3 AC158597.1-201ENSMUST00000216234 150 ntBASIC1.12□□□□□ -2.23
Ccdc28aQ8CEI3 CT485612.4-201ENSMUST00000223405 250 ntBASIC1.12□□□□□ -2.23
Ccdc28aQ8CEI3 AC102352.1-201ENSMUST00000224187 582 ntBASIC1.12□□□□□ -2.23
Ccdc28aQ8CEI3 Gm22620-201ENSMUST00000082700 133 ntBASIC1.12□□□□□ -2.23
Ccdc28aQ8CEI3 Gm25698-201ENSMUST00000082897 107 ntBASIC1.12□□□□□ -2.23
Ccdc28aQ8CEI3 Nkain2-202ENSMUST00000092603 273 ntTSL 5 BASIC1.12□□□□□ -2.23
Ccdc28aQ8CEI3 AC133934.2-201ENSMUST00000221729 4129 ntBASIC1.12□□□□□ -2.23
Ccdc28aQ8CEI3 Gm12370-201ENSMUST00000117809 604 ntBASIC1.11□□□□□ -2.23
Ccdc28aQ8CEI3 Gm13588-201ENSMUST00000120026 135 ntBASIC1.11□□□□□ -2.23
Ccdc28aQ8CEI3 Gm24517-201ENSMUST00000122560 107 ntBASIC1.11□□□□□ -2.23
Ccdc28aQ8CEI3 Smim9-203ENSMUST00000165080 414 ntAPPRIS P1 TSL 3 BASIC1.11□□□□□ -2.23
Ccdc28aQ8CEI3 Gm20543-201ENSMUST00000174200 726 ntBASIC1.11□□□□□ -2.23
Ccdc28aQ8CEI3 Gm17535-201ENSMUST00000178641 672 ntAPPRIS P1 TSL 5 BASIC1.11□□□□□ -2.23
Ccdc28aQ8CEI3 Gm24638-201ENSMUST00000179807 132 ntBASIC1.11□□□□□ -2.23
Ccdc28aQ8CEI3 Gm11168-204ENSMUST00000179881 672 ntAPPRIS ALT2 TSL 5 BASIC1.11□□□□□ -2.23
Ccdc28aQ8CEI3 Gm44644-201ENSMUST00000207994 642 ntTSL 3 BASIC1.11□□□□□ -2.23
Ccdc28aQ8CEI3 AC069561.2-201ENSMUST00000217596 420 ntBASIC1.11□□□□□ -2.23
Ccdc28aQ8CEI3 AC116726.2-201ENSMUST00000217629 986 ntBASIC1.11□□□□□ -2.23
Ccdc28aQ8CEI3 AC158606.1-201ENSMUST00000220078 325 ntBASIC1.11□□□□□ -2.23
Retrieved 100 of 76,532 protein–RNA pairs in 85.5 ms