Protein–RNA interactions for Protein: Q8CEC0

Nup88, Nuclear pore complex protein Nup88, mousemouse

Known RBP Predictions only

Length 753 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nup88Q8CEC0 Gm29107-201ENSMUST00000190910 347 ntBASIC2.61□□□□□ -1.99
Nup88Q8CEC0 Gm37754-201ENSMUST00000194406 452 ntTSL 5 BASIC2.61□□□□□ -1.99
Nup88Q8CEC0 Gm43680-201ENSMUST00000199466 340 ntBASIC2.61□□□□□ -1.99
Nup88Q8CEC0 Gm17990-201ENSMUST00000211728 553 ntBASIC2.61□□□□□ -1.99
Nup88Q8CEC0 Gm7495-201ENSMUST00000215099 426 ntBASIC2.61□□□□□ -1.99
Nup88Q8CEC0 Gm23249-201ENSMUST00000083369 161 ntBASIC2.61□□□□□ -1.99
Nup88Q8CEC0 Gm23202-201ENSMUST00000104376 129 ntBASIC2.6□□□□□ -1.99
Nup88Q8CEC0 Gm23867-201ENSMUST00000122649 274 ntBASIC2.6□□□□□ -1.99
Nup88Q8CEC0 n-R5s164-201ENSMUST00000122664 112 ntBASIC2.6□□□□□ -1.99
Nup88Q8CEC0 Gm23557-201ENSMUST00000157820 138 ntBASIC2.6□□□□□ -1.99
Nup88Q8CEC0 Gm26936-201ENSMUST00000182424 382 ntTSL 1 (best) BASIC2.6□□□□□ -1.99
Nup88Q8CEC0 Gm26979-201ENSMUST00000182971 217 ntTSL 3 BASIC2.6□□□□□ -1.99
Nup88Q8CEC0 Mir7093-201ENSMUST00000184195 101 ntBASIC2.6□□□□□ -1.99
Nup88Q8CEC0 Scgb1b1-ps-201ENSMUST00000189264 268 ntBASIC2.6□□□□□ -1.99
Nup88Q8CEC0 Mir3068-202ENSMUST00000197755 79 ntBASIC2.6□□□□□ -1.99
Nup88Q8CEC0 Gm19118-201ENSMUST00000222554 98 ntBASIC2.6□□□□□ -1.99
Nup88Q8CEC0 AC159619.2-201ENSMUST00000222924 401 ntBASIC2.6□□□□□ -1.99
Nup88Q8CEC0 Gm30155-201ENSMUST00000223458 339 ntBASIC2.6□□□□□ -1.99
Nup88Q8CEC0 AC123533.1-201ENSMUST00000227782 446 ntBASIC2.6□□□□□ -1.99
Nup88Q8CEC0 Gm23627-201ENSMUST00000082459 107 ntBASIC2.6□□□□□ -1.99
Nup88Q8CEC0 Gm22502-201ENSMUST00000082488 107 ntBASIC2.6□□□□□ -1.99
Nup88Q8CEC0 Gm22977-201ENSMUST00000082615 107 ntBASIC2.6□□□□□ -1.99
Nup88Q8CEC0 Gm24149-201ENSMUST00000082757 107 ntBASIC2.6□□□□□ -1.99
Nup88Q8CEC0 Klra3-201ENSMUST00000088017 984 ntAPPRIS P1 TSL 1 (best) BASIC2.6□□□□□ -1.99
Nup88Q8CEC0 Gm25207-201ENSMUST00000093745 107 ntBASIC2.6□□□□□ -1.99
Nup88Q8CEC0 Vmn1r87-202ENSMUST00000211249 1835 ntAPPRIS P1 TSL 3 BASIC2.6□□□□□ -1.99
Nup88Q8CEC0 Olfr868-202ENSMUST00000212999 4233 ntAPPRIS P1 TSL 3 BASIC2.6□□□□□ -1.99
Nup88Q8CEC0 Gm7164-201ENSMUST00000117503 450 ntBASIC2.59□□□□□ -1.99
Nup88Q8CEC0 Gm12941-201ENSMUST00000117934 220 ntBASIC2.59□□□□□ -1.99
Nup88Q8CEC0 Gm23169-201ENSMUST00000157157 112 ntBASIC2.59□□□□□ -1.99
Nup88Q8CEC0 Gm25384-201ENSMUST00000157807 105 ntBASIC2.59□□□□□ -1.99
Nup88Q8CEC0 Gm25454-201ENSMUST00000157947 315 ntBASIC2.59□□□□□ -1.99
Nup88Q8CEC0 Gm23476-201ENSMUST00000158881 274 ntBASIC2.59□□□□□ -1.99
Nup88Q8CEC0 Ear-ps8-201ENSMUST00000161935 354 ntBASIC2.59□□□□□ -1.99
Nup88Q8CEC0 Mir5101-201ENSMUST00000175181 83 ntBASIC2.59□□□□□ -1.99
Nup88Q8CEC0 Gm29322-201ENSMUST00000185378 582 ntTSL 5 BASIC2.59□□□□□ -1.99
Nup88Q8CEC0 Gm25820-202ENSMUST00000197479 128 ntBASIC2.59□□□□□ -1.99
Nup88Q8CEC0 Olfr505-ps1-201ENSMUST00000207626 976 ntBASIC2.59□□□□□ -1.99
Nup88Q8CEC0 Gm18453-201ENSMUST00000208000 626 ntBASIC2.59□□□□□ -1.99
Nup88Q8CEC0 AC158606.1-201ENSMUST00000220078 325 ntBASIC2.59□□□□□ -1.99
Nup88Q8CEC0 AC159632.1-201ENSMUST00000221808 317 ntTSL 1 (best) BASIC2.59□□□□□ -1.99
Nup88Q8CEC0 Gm9318-201ENSMUST00000222444 438 ntBASIC2.59□□□□□ -1.99
Nup88Q8CEC0 1700084M14Rik-201ENSMUST00000078832 559 ntAPPRIS P1 TSL 1 (best) BASIC2.59□□□□□ -1.99
Nup88Q8CEC0 Mir423-201ENSMUST00000083584 109 ntBASIC2.59□□□□□ -1.99
Nup88Q8CEC0 Gm10203-201ENSMUST00000087348 198 ntAPPRIS P1 TSL 5 BASIC2.59□□□□□ -1.99
Nup88Q8CEC0 AC125374.3-201ENSMUST00000214983 2810 ntBASIC2.59□□□□□ -2
Nup88Q8CEC0 AC158598.1-201ENSMUST00000214349 3847 ntBASIC2.58□□□□□ -2
Nup88Q8CEC0 Olfr681-203ENSMUST00000215517 4324 ntAPPRIS P1 TSL 5 BASIC2.58□□□□□ -2
Nup88Q8CEC0 Rpl31-ps6-201ENSMUST00000119959 378 ntBASIC2.58□□□□□ -2
Nup88Q8CEC0 Gm3027-201ENSMUST00000167579 451 ntBASIC2.58□□□□□ -2
Nup88Q8CEC0 Gm23191-201ENSMUST00000179147 107 ntBASIC2.58□□□□□ -2
Nup88Q8CEC0 Gm28744-201ENSMUST00000189939 340 ntBASIC2.58□□□□□ -2
Nup88Q8CEC0 Gm45315-201ENSMUST00000209283 333 ntBASIC2.58□□□□□ -2
Nup88Q8CEC0 AC104832.1-201ENSMUST00000222938 550 ntBASIC2.58□□□□□ -2
Nup88Q8CEC0 Olfr1442-202ENSMUST00000207341 3126 ntAPPRIS P1 TSL 3 BASIC2.58□□□□□ -2
Nup88Q8CEC0 Olfr1442-204ENSMUST00000208657 3148 ntAPPRIS P1 TSL 3 BASIC2.58□□□□□ -2
Nup88Q8CEC0 Olfr199-202ENSMUST00000214186 2728 ntAPPRIS P1 TSL 5 BASIC2.58□□□□□ -2
Nup88Q8CEC0 Olfr394-202ENSMUST00000214284 5562 ntAPPRIS P1 TSL 5 BASIC2.57□□□□□ -2
Nup88Q8CEC0 Olfr165-202ENSMUST00000206110 1862 ntAPPRIS ALT1 TSL 3 BASIC2.57□□□□□ -2
Nup88Q8CEC0 Gm24172-201ENSMUST00000104127 117 ntBASIC2.57□□□□□ -2
Nup88Q8CEC0 Gm13672-201ENSMUST00000117554 459 ntBASIC2.57□□□□□ -2
Nup88Q8CEC0 Gm13457-201ENSMUST00000117885 267 ntBASIC2.57□□□□□ -2
Nup88Q8CEC0 Gm14269-201ENSMUST00000120455 306 ntBASIC2.57□□□□□ -2
Nup88Q8CEC0 Gm12721-201ENSMUST00000120621 268 ntBASIC2.57□□□□□ -2
Nup88Q8CEC0 Gm2830-201ENSMUST00000140330 385 ntBASIC2.57□□□□□ -2
Nup88Q8CEC0 Gm23033-201ENSMUST00000157996 134 ntBASIC2.57□□□□□ -2
Nup88Q8CEC0 Cypt14-201ENSMUST00000179096 508 ntAPPRIS P1 TSL 1 (best) BASIC2.57□□□□□ -2
Nup88Q8CEC0 Gm37923-201ENSMUST00000191624 161 ntBASIC2.57□□□□□ -2
Nup88Q8CEC0 Vamp4-208ENSMUST00000194810 600 ntTSL 5 BASIC2.57□□□□□ -2
Nup88Q8CEC0 Gm40040-202ENSMUST00000196337 305 ntTSL 3 BASIC2.57□□□□□ -2
Nup88Q8CEC0 Gm43723-201ENSMUST00000196886 189 ntBASIC2.57□□□□□ -2
Nup88Q8CEC0 Gm26379-202ENSMUST00000200225 132 ntBASIC2.57□□□□□ -2
Nup88Q8CEC0 Gm44024-201ENSMUST00000203008 476 ntBASIC2.57□□□□□ -2
Nup88Q8CEC0 Olfr1435-ps1-201ENSMUST00000207773 249 ntBASIC2.57□□□□□ -2
Nup88Q8CEC0 Gm45815-201ENSMUST00000220241 146 ntBASIC2.57□□□□□ -2
Nup88Q8CEC0 AC122465.2-201ENSMUST00000221774 354 ntBASIC2.57□□□□□ -2
Nup88Q8CEC0 AC130821.1-201ENSMUST00000221997 293 ntBASIC2.57□□□□□ -2
Nup88Q8CEC0 AC126554.1-201ENSMUST00000222161 271 ntBASIC2.57□□□□□ -2
Nup88Q8CEC0 Gm24623-201ENSMUST00000082616 194 ntBASIC2.57□□□□□ -2
Nup88Q8CEC0 Olfr803-202ENSMUST00000204641 2385 ntAPPRIS P1 TSL 5 BASIC2.57□□□□□ -2
Nup88Q8CEC0 Olfr1496-202ENSMUST00000209137 2394 ntAPPRIS ALT1 TSL 5 BASIC2.57□□□□□ -2
Nup88Q8CEC0 Gm23951-201ENSMUST00000104029 132 ntBASIC2.56□□□□□ -2
Nup88Q8CEC0 Snord98-201ENSMUST00000116819 65 ntBASIC2.56□□□□□ -2
Nup88Q8CEC0 Gm14774-201ENSMUST00000117857 536 ntBASIC2.56□□□□□ -2
Nup88Q8CEC0 4930511O05Rik-201ENSMUST00000155912 391 ntTSL 1 (best) BASIC2.56□□□□□ -2
Nup88Q8CEC0 Gm37054-201ENSMUST00000193481 543 ntBASIC2.56□□□□□ -2
Nup88Q8CEC0 Trav5d-2-201ENSMUST00000196107 275 ntBASIC2.56□□□□□ -2
Nup88Q8CEC0 Trav5n-2-201ENSMUST00000197136 275 ntBASIC2.56□□□□□ -2
Nup88Q8CEC0 Gm35077-201ENSMUST00000204999 275 ntTSL 3 BASIC2.56□□□□□ -2
Nup88Q8CEC0 Gm40810-201ENSMUST00000219149 253 ntBASIC2.56□□□□□ -2
Nup88Q8CEC0 Mir322-201ENSMUST00000083484 95 ntBASIC2.56□□□□□ -2
Nup88Q8CEC0 Gm10192-201ENSMUST00000086672 327 ntAPPRIS P1 BASIC2.56□□□□□ -2
Nup88Q8CEC0 Olfr1156-201ENSMUST00000099842 1076 ntAPPRIS P1 BASIC2.56□□□□□ -2
Nup88Q8CEC0 Olfr479-202ENSMUST00000209805 2902 ntAPPRIS P1 TSL 5 BASIC2.55□□□□□ -2
Nup88Q8CEC0 Gm26396-201ENSMUST00000104093 132 ntBASIC2.55□□□□□ -2
Nup88Q8CEC0 Atp5k-ps2-201ENSMUST00000120437 210 ntBASIC2.55□□□□□ -2
Nup88Q8CEC0 Gm24481-201ENSMUST00000157210 102 ntBASIC2.55□□□□□ -2
Nup88Q8CEC0 Gm23331-201ENSMUST00000157423 108 ntBASIC2.55□□□□□ -2
Nup88Q8CEC0 Gm24900-201ENSMUST00000158128 134 ntBASIC2.55□□□□□ -2
Nup88Q8CEC0 Gm24810-201ENSMUST00000175317 70 ntBASIC2.55□□□□□ -2
Retrieved 100 of 76,532 protein–RNA pairs in 91.3 ms