Protein–RNA interactions for Protein: Q8C0D0

Trub1, Probable tRNA pseudouridine synthase 1, mousemouse

Known RBP Predictions only

Length 338 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trub1Q8C0D0 AC116726.2-201ENSMUST00000217629 986 ntBASIC1.15□□□□□ -2.23
Trub1Q8C0D0 AC102352.1-201ENSMUST00000224187 582 ntBASIC1.15□□□□□ -2.23
Trub1Q8C0D0 Gm24045-201ENSMUST00000083113 98 ntBASIC1.15□□□□□ -2.23
Trub1Q8C0D0 Mir29b-2-201ENSMUST00000083478 81 ntBASIC1.15□□□□□ -2.23
Trub1Q8C0D0 4930430A15Rik-201ENSMUST00000028577 1840 ntAPPRIS P1 TSL 1 (best) BASIC1.15□□□□□ -2.23
Trub1Q8C0D0 Ppp1r42-201ENSMUST00000027049 1425 ntAPPRIS P1 TSL 1 (best) BASIC1.15□□□□□ -2.23
Trub1Q8C0D0 AC133934.2-201ENSMUST00000221729 4129 ntBASIC1.14□□□□□ -2.23
Trub1Q8C0D0 Gm24079-201ENSMUST00000104352 132 ntBASIC1.14□□□□□ -2.23
Trub1Q8C0D0 Gm8858-201ENSMUST00000118259 342 ntBASIC1.14□□□□□ -2.23
Trub1Q8C0D0 n-R5s15-201ENSMUST00000122635 111 ntBASIC1.14□□□□□ -2.23
Trub1Q8C0D0 Gm45886-201ENSMUST00000148141 342 ntTSL 5 BASIC1.14□□□□□ -2.23
Trub1Q8C0D0 Gm25115-201ENSMUST00000157187 140 ntBASIC1.14□□□□□ -2.23
Trub1Q8C0D0 Gm25706-201ENSMUST00000157828 247 ntBASIC1.14□□□□□ -2.23
Trub1Q8C0D0 Gm24677-201ENSMUST00000158755 150 ntBASIC1.14□□□□□ -2.23
Trub1Q8C0D0 Gm8871-202ENSMUST00000168945 549 ntAPPRIS ALT2 TSL 5 BASIC1.14□□□□□ -2.23
Trub1Q8C0D0 Gm20477-201ENSMUST00000174028 280 ntBASIC1.14□□□□□ -2.23
Trub1Q8C0D0 Gm28560-201ENSMUST00000186091 315 ntBASIC1.14□□□□□ -2.23
Trub1Q8C0D0 Gm28334-201ENSMUST00000186653 315 ntBASIC1.14□□□□□ -2.23
Trub1Q8C0D0 Gm28495-201ENSMUST00000188452 315 ntBASIC1.14□□□□□ -2.23
Trub1Q8C0D0 Gm28448-201ENSMUST00000188547 428 ntTSL 5 BASIC1.14□□□□□ -2.23
Trub1Q8C0D0 Gm28232-201ENSMUST00000188683 315 ntBASIC1.14□□□□□ -2.23
Trub1Q8C0D0 Gm28481-201ENSMUST00000189231 315 ntBASIC1.14□□□□□ -2.23
Trub1Q8C0D0 Gm29059-201ENSMUST00000191534 315 ntBASIC1.14□□□□□ -2.23
Trub1Q8C0D0 Gm37765-201ENSMUST00000192395 315 ntBASIC1.14□□□□□ -2.23
Trub1Q8C0D0 Gm37237-201ENSMUST00000192893 315 ntBASIC1.14□□□□□ -2.23
Trub1Q8C0D0 Gm36968-201ENSMUST00000193737 315 ntBASIC1.14□□□□□ -2.23
Trub1Q8C0D0 Gm37027-201ENSMUST00000194642 256 ntTSL 1 (best) BASIC1.14□□□□□ -2.23
Trub1Q8C0D0 Gm38290-201ENSMUST00000195238 315 ntBASIC1.14□□□□□ -2.23
Trub1Q8C0D0 Igkv15-102-201ENSMUST00000197885 287 ntBASIC1.14□□□□□ -2.23
Trub1Q8C0D0 Obox4-ps25-201ENSMUST00000199090 210 ntBASIC1.14□□□□□ -2.23
Trub1Q8C0D0 AC166830.2-201ENSMUST00000225821 196 ntBASIC1.14□□□□□ -2.23
Trub1Q8C0D0 Olfr822-201ENSMUST00000080460 942 ntAPPRIS P1 BASIC1.14□□□□□ -2.23
Trub1Q8C0D0 Snora3-201ENSMUST00000083082 132 ntBASIC1.14□□□□□ -2.23
Trub1Q8C0D0 Mir429-201ENSMUST00000083493 83 ntBASIC1.14□□□□□ -2.23
Trub1Q8C0D0 Gm10717-203ENSMUST00000099051 639 ntAPPRIS ALT2 TSL 5 BASIC1.14□□□□□ -2.23
Trub1Q8C0D0 Gm44114-201ENSMUST00000203270 2727 ntBASIC1.13□□□□□ -2.23
Trub1Q8C0D0 Olfr1151-202ENSMUST00000217376 2866 ntAPPRIS P1 TSL 5 BASIC1.13□□□□□ -2.23
Trub1Q8C0D0 Gm24430-201ENSMUST00000104077 104 ntBASIC1.13□□□□□ -2.23
Trub1Q8C0D0 Gm5396-201ENSMUST00000121222 532 ntBASIC1.13□□□□□ -2.23
Trub1Q8C0D0 Gm23829-201ENSMUST00000157392 270 ntBASIC1.13□□□□□ -2.23
Trub1Q8C0D0 Gm22668-201ENSMUST00000158716 260 ntBASIC1.13□□□□□ -2.23
Trub1Q8C0D0 Gm25069-201ENSMUST00000175238 86 ntBASIC1.13□□□□□ -2.23
Trub1Q8C0D0 Mir28b-201ENSMUST00000175399 80 ntBASIC1.13□□□□□ -2.23
Trub1Q8C0D0 Gm23619-201ENSMUST00000178411 94 ntBASIC1.13□□□□□ -2.23
Trub1Q8C0D0 Gm25474-201ENSMUST00000179052 94 ntBASIC1.13□□□□□ -2.23
Trub1Q8C0D0 Gm22047-201ENSMUST00000179176 94 ntBASIC1.13□□□□□ -2.23
Trub1Q8C0D0 Mir6381-201ENSMUST00000183426 87 ntBASIC1.13□□□□□ -2.23
Trub1Q8C0D0 Gm17771-201ENSMUST00000194477 1147 ntBASIC1.13□□□□□ -2.23
Trub1Q8C0D0 Gm43583-201ENSMUST00000199235 303 ntBASIC1.13□□□□□ -2.23
Trub1Q8C0D0 Ear14-201ENSMUST00000049559 468 ntBASIC1.13□□□□□ -2.23
Trub1Q8C0D0 Zfp934-201ENSMUST00000082203 993 ntTSL 5 BASIC1.13□□□□□ -2.23
Trub1Q8C0D0 Gm10719-201ENSMUST00000099047 681 ntAPPRIS P5 TSL 5 BASIC1.13□□□□□ -2.23
Trub1Q8C0D0 Gm38388-201ENSMUST00000195569 1430 ntBASIC1.13□□□□□ -2.23
Trub1Q8C0D0 Gm22780-201ENSMUST00000104084 132 ntBASIC1.12□□□□□ -2.23
Trub1Q8C0D0 Gm15365-201ENSMUST00000122392 300 ntBASIC1.12□□□□□ -2.23
Trub1Q8C0D0 Gm25784-201ENSMUST00000122524 81 ntBASIC1.12□□□□□ -2.23
Trub1Q8C0D0 Gm13601-201ENSMUST00000142314 404 ntTSL 3 BASIC1.12□□□□□ -2.23
Trub1Q8C0D0 Gm25557-201ENSMUST00000158084 315 ntBASIC1.12□□□□□ -2.23
Trub1Q8C0D0 Gm18357-201ENSMUST00000188184 580 ntBASIC1.12□□□□□ -2.23
Trub1Q8C0D0 Gm44395-201ENSMUST00000197056 153 ntBASIC1.12□□□□□ -2.23
Trub1Q8C0D0 Gm44071-201ENSMUST00000204180 448 ntTSL 1 (best) BASIC1.12□□□□□ -2.23
Trub1Q8C0D0 AC159203.2-201ENSMUST00000221326 193 ntBASIC1.12□□□□□ -2.23
Trub1Q8C0D0 Mir10a-201ENSMUST00000083585 110 ntBASIC1.12□□□□□ -2.23
Trub1Q8C0D0 Gm24252-201ENSMUST00000083700 132 ntBASIC1.12□□□□□ -2.23
Trub1Q8C0D0 Gm13231-201ENSMUST00000119218 2850 ntBASIC1.12□□□□□ -2.23
Trub1Q8C0D0 Olfr820-202ENSMUST00000214917 4701 ntAPPRIS P1 TSL 5 BASIC1.11□□□□□ -2.23
Trub1Q8C0D0 Gm14624-201ENSMUST00000117746 192 ntBASIC1.11□□□□□ -2.23
Trub1Q8C0D0 Gm15659-201ENSMUST00000118881 341 ntBASIC1.11□□□□□ -2.23
Trub1Q8C0D0 Gm6025-201ENSMUST00000121517 201 ntBASIC1.11□□□□□ -2.23
Trub1Q8C0D0 Gm24892-201ENSMUST00000122747 104 ntBASIC1.11□□□□□ -2.23
Trub1Q8C0D0 Gm6956-201ENSMUST00000134724 546 ntBASIC1.11□□□□□ -2.23
Trub1Q8C0D0 Gm22143-201ENSMUST00000157401 203 ntBASIC1.11□□□□□ -2.23
Trub1Q8C0D0 Olfr1366-201ENSMUST00000168629 1054 ntAPPRIS ALT2 BASIC1.11□□□□□ -2.23
Trub1Q8C0D0 Gm23862-201ENSMUST00000180342 94 ntBASIC1.11□□□□□ -2.23
Trub1Q8C0D0 Gm28595-201ENSMUST00000186223 437 ntTSL 5 BASIC1.11□□□□□ -2.23
Trub1Q8C0D0 Mir3961-201ENSMUST00000198795 59 ntBASIC1.11□□□□□ -2.23
Trub1Q8C0D0 Gm42891-201ENSMUST00000199340 281 ntTSL 5 BASIC1.11□□□□□ -2.23
Trub1Q8C0D0 Gm42475-201ENSMUST00000201212 295 ntBASIC1.11□□□□□ -2.23
Trub1Q8C0D0 Olfr1366-204ENSMUST00000218154 1054 ntAPPRIS P2 BASIC1.11□□□□□ -2.23
Trub1Q8C0D0 AC163357.1-201ENSMUST00000220847 233 ntBASIC1.11□□□□□ -2.23
Trub1Q8C0D0 CT010506.2-201ENSMUST00000225618 183 ntBASIC1.11□□□□□ -2.23
Trub1Q8C0D0 Gm23462-201ENSMUST00000083264 104 ntBASIC1.11□□□□□ -2.23
Trub1Q8C0D0 Mir219a-2-201ENSMUST00000083551 97 ntBASIC1.11□□□□□ -2.23
Trub1Q8C0D0 Mir92-2-201ENSMUST00000083679 91 ntBASIC1.11□□□□□ -2.23
Trub1Q8C0D0 Olfr832-202ENSMUST00000218385 4435 ntAPPRIS P1 TSL 5 BASIC1.11□□□□□ -2.23
Trub1Q8C0D0 Mir343-201ENSMUST00000102360 75 ntBASIC1.1□□□□□ -2.23
Trub1Q8C0D0 Gm25759-201ENSMUST00000103988 129 ntBASIC1.1□□□□□ -2.23
Trub1Q8C0D0 Gm12372-201ENSMUST00000121654 768 ntBASIC1.1□□□□□ -2.23
Trub1Q8C0D0 Gm22944-201ENSMUST00000158662 133 ntBASIC1.1□□□□□ -2.23
Trub1Q8C0D0 Gm22663-201ENSMUST00000158721 102 ntBASIC1.1□□□□□ -2.23
Trub1Q8C0D0 Gm25670-201ENSMUST00000178423 107 ntBASIC1.1□□□□□ -2.23
Trub1Q8C0D0 Gm26239-201ENSMUST00000178842 107 ntBASIC1.1□□□□□ -2.23
Trub1Q8C0D0 Gm24267-201ENSMUST00000179841 107 ntBASIC1.1□□□□□ -2.23
Trub1Q8C0D0 Mir7091-201ENSMUST00000184075 79 ntBASIC1.1□□□□□ -2.23
Trub1Q8C0D0 Gm36406-202ENSMUST00000203761 551 ntTSL 5 BASIC1.1□□□□□ -2.23
Trub1Q8C0D0 Gm2829-201ENSMUST00000213121 499 ntBASIC1.1□□□□□ -2.23
Trub1Q8C0D0 Olfr1543-ps1-201ENSMUST00000217448 908 ntBASIC1.1□□□□□ -2.23
Trub1Q8C0D0 CT009550.5-201ENSMUST00000226286 382 ntBASIC1.1□□□□□ -2.23
Trub1Q8C0D0 Gm24292-201ENSMUST00000082888 107 ntBASIC1.1□□□□□ -2.23
Trub1Q8C0D0 Gm24921-201ENSMUST00000083024 107 ntBASIC1.1□□□□□ -2.23
Retrieved 100 of 76,532 protein–RNA pairs in 329.5 ms