Protein–RNA interactions for Protein: Q8BX13

Ube3d, E3 ubiquitin-protein ligase E3D, mousemouse

Predictions only

Length 368 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ube3dQ8BX13 Gm6625-201ENSMUST00000177870 272 ntBASIC3.3□□□□□ -1.88
Ube3dQ8BX13 Gm25457-201ENSMUST00000179509 107 ntBASIC3.3□□□□□ -1.88
Ube3dQ8BX13 Mir7676-1-201ENSMUST00000183491 62 ntBASIC3.3□□□□□ -1.88
Ube3dQ8BX13 Mir7676-2-201ENSMUST00000183523 62 ntBASIC3.3□□□□□ -1.88
Ube3dQ8BX13 Gm26265-202ENSMUST00000196326 133 ntBASIC3.3□□□□□ -1.88
Ube3dQ8BX13 Gm567-201ENSMUST00000197127 469 ntTSL 3 BASIC3.3□□□□□ -1.88
Ube3dQ8BX13 Gm36189-201ENSMUST00000204113 523 ntBASIC3.3□□□□□ -1.88
Ube3dQ8BX13 AC100590.2-201ENSMUST00000219028 215 ntBASIC3.3□□□□□ -1.88
Ube3dQ8BX13 Gm3829-201ENSMUST00000222362 619 ntBASIC3.3□□□□□ -1.88
Ube3dQ8BX13 AC122242.1-201ENSMUST00000224650 304 ntBASIC3.3□□□□□ -1.88
Ube3dQ8BX13 Cdrt4-201ENSMUST00000035854 723 ntAPPRIS P1 TSL 1 (best) BASIC3.3□□□□□ -1.88
Ube3dQ8BX13 Mir146-201ENSMUST00000083667 65 ntBASIC3.3□□□□□ -1.88
Ube3dQ8BX13 Gm11782-201ENSMUST00000131675 2804 ntTSL 1 (best) BASIC3.3□□□□□ -1.88
Ube3dQ8BX13 Phex-201ENSMUST00000079945 6265 ntAPPRIS P1 TSL 1 (best) BASIC3.3□□□□□ -1.88
Ube3dQ8BX13 Gm3956-201ENSMUST00000164882 2560 ntBASIC3.3□□□□□ -1.88
Ube3dQ8BX13 Vmn2r36-201ENSMUST00000170402 2561 ntAPPRIS P1 TSL 5 BASIC3.3□□□□□ -1.88
Ube3dQ8BX13 Gm3234-202ENSMUST00000223301 3250 ntTSL 1 (best) BASIC3.3□□□□□ -1.88
Ube3dQ8BX13 Vmn1r185-207ENSMUST00000227695 5292 ntAPPRIS P1 BASIC3.3□□□□□ -1.88
Ube3dQ8BX13 Mgat4c-201ENSMUST00000020039 3735 ntAPPRIS P1 TSL 1 (best) BASIC3.29□□□□□ -1.88
Ube3dQ8BX13 Olfr112-201ENSMUST00000085548 3103 ntAPPRIS P1 TSL 5 BASIC3.29□□□□□ -1.88
Ube3dQ8BX13 C87977-201ENSMUST00000105753 2446 ntAPPRIS ALT2 TSL 1 (best) BASIC3.29□□□□□ -1.88
Ube3dQ8BX13 Olfr611-202ENSMUST00000216074 2301 ntAPPRIS P1 TSL 5 BASIC3.29□□□□□ -1.88
Ube3dQ8BX13 Gm25538-201ENSMUST00000101943 107 ntBASIC3.29□□□□□ -1.88
Ube3dQ8BX13 8030453O22Rik-201ENSMUST00000128919 370 ntTSL 3 BASIC3.29□□□□□ -1.88
Ube3dQ8BX13 Gm16533-201ENSMUST00000140035 228 ntBASIC3.29□□□□□ -1.88
Ube3dQ8BX13 Gm22531-201ENSMUST00000158819 140 ntBASIC3.29□□□□□ -1.88
Ube3dQ8BX13 Scgb2b29-ps-201ENSMUST00000187539 331 ntBASIC3.29□□□□□ -1.88
Ube3dQ8BX13 Gm29023-201ENSMUST00000190543 325 ntTSL 5 BASIC3.29□□□□□ -1.88
Ube3dQ8BX13 Gm43155-201ENSMUST00000202661 494 ntBASIC3.29□□□□□ -1.88
Ube3dQ8BX13 1700027F06Rik-201ENSMUST00000203901 243 ntTSL 1 (best) BASIC3.29□□□□□ -1.88
Ube3dQ8BX13 Gm5002-201ENSMUST00000207145 223 ntBASIC3.29□□□□□ -1.88
Ube3dQ8BX13 CT010449.1-201ENSMUST00000220624 153 ntBASIC3.29□□□□□ -1.88
Ube3dQ8BX13 AL645546.1-201ENSMUST00000225001 189 ntBASIC3.29□□□□□ -1.88
Ube3dQ8BX13 AC098718.2-201ENSMUST00000226822 285 ntBASIC3.29□□□□□ -1.88
Ube3dQ8BX13 Olfr1135-202ENSMUST00000213835 2648 ntAPPRIS P1 TSL 5 BASIC3.29□□□□□ -1.88
Ube3dQ8BX13 Gm18751-201ENSMUST00000185777 2013 ntBASIC3.28□□□□□ -1.88
Ube3dQ8BX13 Defa-ps9-201ENSMUST00000118264 276 ntBASIC3.28□□□□□ -1.88
Ube3dQ8BX13 Gm13345-201ENSMUST00000121928 228 ntBASIC3.28□□□□□ -1.88
Ube3dQ8BX13 Gm15461-201ENSMUST00000143488 235 ntTSL 3 BASIC3.28□□□□□ -1.88
Ube3dQ8BX13 Gm25424-201ENSMUST00000157612 58 ntBASIC3.28□□□□□ -1.88
Ube3dQ8BX13 Gm23123-201ENSMUST00000157648 144 ntBASIC3.28□□□□□ -1.88
Ube3dQ8BX13 Gm23084-201ENSMUST00000157850 114 ntBASIC3.28□□□□□ -1.88
Ube3dQ8BX13 Gm24727-201ENSMUST00000158231 144 ntBASIC3.28□□□□□ -1.88
Ube3dQ8BX13 Gm27285-201ENSMUST00000183875 127 ntBASIC3.28□□□□□ -1.88
Ube3dQ8BX13 Gm27470-201ENSMUST00000184070 210 ntBASIC3.28□□□□□ -1.88
Ube3dQ8BX13 Gm28179-203ENSMUST00000191382 544 ntTSL 5 BASIC3.28□□□□□ -1.88
Ube3dQ8BX13 Gm38311-201ENSMUST00000192945 165 ntBASIC3.28□□□□□ -1.88
Ube3dQ8BX13 Gm44352-201ENSMUST00000196358 110 ntBASIC3.28□□□□□ -1.88
Ube3dQ8BX13 Gm42834-201ENSMUST00000196845 256 ntBASIC3.28□□□□□ -1.88
Ube3dQ8BX13 AC132615.1-201ENSMUST00000213873 255 ntBASIC3.28□□□□□ -1.88
Ube3dQ8BX13 AC153887.2-201ENSMUST00000219160 3838 ntBASIC3.28□□□□□ -1.88
Ube3dQ8BX13 AC153361.1-201ENSMUST00000219679 247 ntBASIC3.28□□□□□ -1.88
Ube3dQ8BX13 AC136976.1-201ENSMUST00000221440 381 ntTSL 3 BASIC3.28□□□□□ -1.88
Ube3dQ8BX13 AC187103.4-202ENSMUST00000225091 230 ntBASIC3.28□□□□□ -1.88
Ube3dQ8BX13 Gm22299-201ENSMUST00000082663 136 ntBASIC3.28□□□□□ -1.88
Ube3dQ8BX13 Mir302d-201ENSMUST00000083513 66 ntBASIC3.28□□□□□ -1.88
Ube3dQ8BX13 Cngb3-201ENSMUST00000102999 4708 ntAPPRIS P1 TSL 1 (best) BASIC3.28□□□□□ -1.88
Ube3dQ8BX13 4932414N04Rik-201ENSMUST00000055930 3519 ntAPPRIS P1 TSL 5 BASIC3.28□□□□□ -1.88
Ube3dQ8BX13 F8-201ENSMUST00000033539 9784 ntAPPRIS P3 TSL 1 (best) BASIC3.28□□□□□ -1.88
Ube3dQ8BX13 Csmd3-209ENSMUST00000162830 13012 ntAPPRIS P1 TSL 5 BASIC3.28□□□□□ -1.89
Ube3dQ8BX13 Gm42768-201ENSMUST00000197734 2897 ntBASIC3.27□□□□□ -1.89
Ube3dQ8BX13 Olfr681-204ENSMUST00000215564 4487 ntAPPRIS P1 TSL 5 BASIC3.27□□□□□ -1.89
Ube3dQ8BX13 Olfr617-202ENSMUST00000215755 3000 ntAPPRIS P1 TSL 5 BASIC3.27□□□□□ -1.89
Ube3dQ8BX13 Gm24581-201ENSMUST00000103962 133 ntBASIC3.27□□□□□ -1.89
Ube3dQ8BX13 Gm22270-201ENSMUST00000104034 132 ntBASIC3.27□□□□□ -1.89
Ube3dQ8BX13 Gm12550-201ENSMUST00000118478 329 ntBASIC3.27□□□□□ -1.89
Ube3dQ8BX13 Gm11356-201ENSMUST00000118974 192 ntBASIC3.27□□□□□ -1.89
Ube3dQ8BX13 Gm15497-201ENSMUST00000119137 551 ntBASIC3.27□□□□□ -1.89
Ube3dQ8BX13 Gm15466-201ENSMUST00000122299 333 ntBASIC3.27□□□□□ -1.89
Ube3dQ8BX13 Gm23350-201ENSMUST00000158429 103 ntBASIC3.27□□□□□ -1.89
Ube3dQ8BX13 Vmn2r-ps78-201ENSMUST00000173350 308 ntBASIC3.27□□□□□ -1.89
Ube3dQ8BX13 Mir3070b-201ENSMUST00000175205 89 ntBASIC3.27□□□□□ -1.89
Ube3dQ8BX13 Gm24106-201ENSMUST00000175498 127 ntBASIC3.27□□□□□ -1.89
Ube3dQ8BX13 Gm37343-201ENSMUST00000192542 111 ntBASIC3.27□□□□□ -1.89
Ube3dQ8BX13 9530022L04Rik-201ENSMUST00000194340 310 ntBASIC3.27□□□□□ -1.89
Ube3dQ8BX13 Gm42470-201ENSMUST00000198086 251 ntTSL 3 BASIC3.27□□□□□ -1.89
Ube3dQ8BX13 Gm44459-201ENSMUST00000203926 160 ntBASIC3.27□□□□□ -1.89
Ube3dQ8BX13 Gm44174-201ENSMUST00000205022 141 ntTSL 2 BASIC3.27□□□□□ -1.89
Ube3dQ8BX13 Gm34779-201ENSMUST00000210036 263 ntBASIC3.27□□□□□ -1.89
Ube3dQ8BX13 AC158597.1-201ENSMUST00000216234 150 ntBASIC3.27□□□□□ -1.89
Ube3dQ8BX13 Gm35865-201ENSMUST00000220180 287 ntTSL 3 BASIC3.27□□□□□ -1.89
Ube3dQ8BX13 AC120555.1-201ENSMUST00000221020 222 ntTSL 5 BASIC3.27□□□□□ -1.89
Ube3dQ8BX13 AC125379.1-201ENSMUST00000221928 111 ntBASIC3.27□□□□□ -1.89
Ube3dQ8BX13 AC124549.2-201ENSMUST00000224243 222 ntBASIC3.27□□□□□ -1.89
Ube3dQ8BX13 AC167669.1-201ENSMUST00000224932 384 ntBASIC3.27□□□□□ -1.89
Ube3dQ8BX13 AC123860.1-201ENSMUST00000228033 481 ntBASIC3.27□□□□□ -1.89
Ube3dQ8BX13 1700010L04Rik-201ENSMUST00000032872 330 ntTSL 5 BASIC3.27□□□□□ -1.89
Ube3dQ8BX13 Olfr194-202ENSMUST00000213228 3668 ntAPPRIS P1 TSL 5 BASIC3.27□□□□□ -1.89
Ube3dQ8BX13 Gm10287-202ENSMUST00000180599 4059 ntBASIC3.27□□□□□ -1.89
Ube3dQ8BX13 Wnk3-205ENSMUST00000184392 5394 ntAPPRIS P4 TSL 1 (best) BASIC3.27□□□□□ -1.89
Ube3dQ8BX13 AC125223.3-201ENSMUST00000223588 2067 ntBASIC3.26□□□□□ -1.89
Ube3dQ8BX13 Olfr814-202ENSMUST00000213742 3798 ntAPPRIS P1 TSL 5 BASIC3.26□□□□□ -1.89
Ube3dQ8BX13 Gm12155-201ENSMUST00000121267 160 ntBASIC3.26□□□□□ -1.89
Ube3dQ8BX13 Gm26476-201ENSMUST00000122618 313 ntBASIC3.26□□□□□ -1.89
Ube3dQ8BX13 Ppp1r2-ps7-201ENSMUST00000140102 609 ntBASIC3.26□□□□□ -1.89
Ube3dQ8BX13 Gm22840-201ENSMUST00000158444 136 ntBASIC3.26□□□□□ -1.89
Ube3dQ8BX13 Gm3646-201ENSMUST00000171319 352 ntAPPRIS P1 TSL 1 (best) BASIC3.26□□□□□ -1.89
Ube3dQ8BX13 Gm21798-201ENSMUST00000180105 261 ntAPPRIS P1 TSL 5 BASIC3.26□□□□□ -1.89
Ube3dQ8BX13 Mpc1-ps-201ENSMUST00000181662 330 ntBASIC3.26□□□□□ -1.89
Ube3dQ8BX13 Gm27189-201ENSMUST00000184119 190 ntBASIC3.26□□□□□ -1.89
Retrieved 100 of 76,532 protein–RNA pairs in 93.9 ms