Protein–RNA interactions for Protein: Q8BWR4

Usp40, Ubiquitin carboxyl-terminal hydrolase 40, mousemouse

Predictions only

Length 1,235 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usp40Q8BWR4 Gm12068-201ENSMUST00000153153 376 ntTSL 3 BASIC4.11□□□□□ -1.75
Usp40Q8BWR4 Gm24005-201ENSMUST00000158459 296 ntBASIC4.11□□□□□ -1.75
Usp40Q8BWR4 Gm26214-201ENSMUST00000158581 107 ntBASIC4.11□□□□□ -1.75
Usp40Q8BWR4 Gm44324-201ENSMUST00000198517 135 ntBASIC4.11□□□□□ -1.75
Usp40Q8BWR4 Gm44399-201ENSMUST00000205043 226 ntBASIC4.11□□□□□ -1.75
Usp40Q8BWR4 Gm26066-201ENSMUST00000083385 109 ntBASIC4.11□□□□□ -1.75
Usp40Q8BWR4 Pkhd1l1-202ENSMUST00000166957 12747 ntTSL 5 BASIC4.11□□□□□ -1.75
Usp40Q8BWR4 Pkhd1l1-201ENSMUST00000038336 12741 ntTSL 1 (best) BASIC4.11□□□□□ -1.75
Usp40Q8BWR4 Gm21033-201ENSMUST00000208590 2608 ntBASIC4.1□□□□□ -1.75
Usp40Q8BWR4 Gabra2-203ENSMUST00000197284 5852 ntAPPRIS P1 TSL 1 (best) BASIC4.1□□□□□ -1.75
Usp40Q8BWR4 Gm36989-201ENSMUST00000193225 2160 ntBASIC4.1□□□□□ -1.75
Usp40Q8BWR4 Gm20557-201ENSMUST00000192871 2794 ntTSL 1 (best) BASIC4.1□□□□□ -1.75
Usp40Q8BWR4 Gm12640-201ENSMUST00000120097 310 ntBASIC4.1□□□□□ -1.75
Usp40Q8BWR4 Gm17224-201ENSMUST00000171429 500 ntTSL 3 BASIC4.1□□□□□ -1.75
Usp40Q8BWR4 Gm27532-201ENSMUST00000183726 113 ntBASIC4.1□□□□□ -1.75
Usp40Q8BWR4 Gm27648-201ENSMUST00000184315 107 ntBASIC4.1□□□□□ -1.75
Usp40Q8BWR4 Gm45355-201ENSMUST00000211342 296 ntTSL 3 BASIC4.1□□□□□ -1.75
Usp40Q8BWR4 Gm45778-201ENSMUST00000211959 153 ntBASIC4.1□□□□□ -1.75
Usp40Q8BWR4 AC098718.2-201ENSMUST00000226822 285 ntBASIC4.1□□□□□ -1.75
Usp40Q8BWR4 AC123533.1-201ENSMUST00000227782 446 ntBASIC4.1□□□□□ -1.75
Usp40Q8BWR4 Gm12010-201ENSMUST00000122400 2017 ntBASIC4.1□□□□□ -1.75
Usp40Q8BWR4 Fam81b-201ENSMUST00000208418 2760 ntAPPRIS P1 TSL 5 BASIC4.1□□□□□ -1.75
Usp40Q8BWR4 Neb-203ENSMUST00000075301 21456 ntAPPRIS ALT2 TSL 5 BASIC4.09□□□□□ -1.75
Usp40Q8BWR4 Olfr786-202ENSMUST00000204529 2824 ntAPPRIS P1 TSL 3 BASIC4.09□□□□□ -1.75
Usp40Q8BWR4 Nexn-211ENSMUST00000199423 2016 ntAPPRIS ALT2 TSL 1 (best) BASIC4.09□□□□□ -1.75
Usp40Q8BWR4 Mcmdc2-204ENSMUST00000140948 3249 ntTSL 5 BASIC4.09□□□□□ -1.75
Usp40Q8BWR4 1700119I11Rik-201ENSMUST00000122270 336 ntTSL 1 (best) BASIC4.09□□□□□ -1.75
Usp40Q8BWR4 Gm24594-201ENSMUST00000122502 99 ntBASIC4.09□□□□□ -1.75
Usp40Q8BWR4 Gm7582-201ENSMUST00000160831 603 ntBASIC4.09□□□□□ -1.75
Usp40Q8BWR4 Mir5123-201ENSMUST00000177794 83 ntBASIC4.09□□□□□ -1.75
Usp40Q8BWR4 Gm28344-201ENSMUST00000185704 279 ntBASIC4.09□□□□□ -1.75
Usp40Q8BWR4 Gm44349-201ENSMUST00000197048 123 ntBASIC4.09□□□□□ -1.75
Usp40Q8BWR4 Gm18991-201ENSMUST00000209225 746 ntBASIC4.09□□□□□ -1.75
Usp40Q8BWR4 AC105958.2-201ENSMUST00000214167 191 ntBASIC4.09□□□□□ -1.75
Usp40Q8BWR4 Gm22062-201ENSMUST00000082563 107 ntBASIC4.09□□□□□ -1.75
Usp40Q8BWR4 Gm22806-201ENSMUST00000082738 136 ntBASIC4.09□□□□□ -1.75
Usp40Q8BWR4 Mir302d-201ENSMUST00000083513 66 ntBASIC4.09□□□□□ -1.75
Usp40Q8BWR4 Gm22353-201ENSMUST00000083918 136 ntBASIC4.09□□□□□ -1.75
Usp40Q8BWR4 Olfr124-203ENSMUST00000216478 4416 ntAPPRIS P1 TSL 5 BASIC4.09□□□□□ -1.75
Usp40Q8BWR4 Gm17976-201ENSMUST00000184037 1909 ntBASIC4.09□□□□□ -1.76
Usp40Q8BWR4 Elavl4-202ENSMUST00000102723 4024 ntTSL 1 (best) BASIC4.08□□□□□ -1.76
Usp40Q8BWR4 Inpp4b-201ENSMUST00000042529 4120 ntAPPRIS P3 TSL 1 (best) BASIC4.08□□□□□ -1.76
Usp40Q8BWR4 Ifi203-203ENSMUST00000123708 3482 ntAPPRIS P3 TSL 1 (best) BASIC4.08□□□□□ -1.76
Usp40Q8BWR4 Gm12150-201ENSMUST00000130874 468 ntTSL 3 BASIC4.08□□□□□ -1.76
Usp40Q8BWR4 Gm15870-201ENSMUST00000132657 644 ntTSL 3 BASIC4.08□□□□□ -1.76
Usp40Q8BWR4 Gm27505-201ENSMUST00000185071 110 ntBASIC4.08□□□□□ -1.76
Usp40Q8BWR4 Vmn1r-ps16-201ENSMUST00000204747 105 ntBASIC4.08□□□□□ -1.76
Usp40Q8BWR4 AC138401.1-201ENSMUST00000221533 116 ntBASIC4.08□□□□□ -1.76
Usp40Q8BWR4 AC164304.1-201ENSMUST00000226920 272 ntBASIC4.08□□□□□ -1.76
Usp40Q8BWR4 CT485608.1-201ENSMUST00000228759 389 ntBASIC4.08□□□□□ -1.76
Usp40Q8BWR4 Adam29-201ENSMUST00000053441 2726 ntAPPRIS P1 TSL 1 (best) BASIC4.08□□□□□ -1.76
Usp40Q8BWR4 Gm24762-201ENSMUST00000083689 104 ntBASIC4.08□□□□□ -1.76
Usp40Q8BWR4 Olfr1454-203ENSMUST00000214695 4049 ntAPPRIS P1 TSL 5 BASIC4.08□□□□□ -1.76
Usp40Q8BWR4 Gpr82-201ENSMUST00000053659 2497 ntAPPRIS P1 TSL 1 (best) BASIC4.07□□□□□ -1.76
Usp40Q8BWR4 Olfr346-202ENSMUST00000213258 4104 ntAPPRIS P1 TSL 5 BASIC4.07□□□□□ -1.76
Usp40Q8BWR4 Slc25a36-201ENSMUST00000035024 4043 ntTSL 1 (best) BASIC4.07□□□□□ -1.76
Usp40Q8BWR4 Gm42684-201ENSMUST00000197663 3615 ntBASIC4.07□□□□□ -1.76
Usp40Q8BWR4 Gm36969-201ENSMUST00000194551 2809 ntBASIC4.07□□□□□ -1.76
Usp40Q8BWR4 Zfp979-201ENSMUST00000037565 2558 ntAPPRIS P1 TSL 2 BASIC4.07□□□□□ -1.76
Usp40Q8BWR4 Rps15a-ps5-201ENSMUST00000132586 393 ntBASIC4.07□□□□□ -1.76
Usp40Q8BWR4 Gm23466-201ENSMUST00000157133 106 ntBASIC4.07□□□□□ -1.76
Usp40Q8BWR4 Gm24691-201ENSMUST00000157762 140 ntBASIC4.07□□□□□ -1.76
Usp40Q8BWR4 H3f3aos-202ENSMUST00000159740 229 ntTSL 5 BASIC4.07□□□□□ -1.76
Usp40Q8BWR4 Gm17218-201ENSMUST00000165911 410 ntTSL 3 BASIC4.07□□□□□ -1.76
Usp40Q8BWR4 Gm27535-201ENSMUST00000183814 157 ntBASIC4.07□□□□□ -1.76
Usp40Q8BWR4 1700121L16Rik-201ENSMUST00000189166 561 ntTSL 1 (best) BASIC4.07□□□□□ -1.76
Usp40Q8BWR4 Gm29218-205ENSMUST00000190846 615 ntBASIC4.07□□□□□ -1.76
Usp40Q8BWR4 Gm42578-201ENSMUST00000199960 194 ntBASIC4.07□□□□□ -1.76
Usp40Q8BWR4 Gm44526-201ENSMUST00000204664 121 ntBASIC4.07□□□□□ -1.76
Usp40Q8BWR4 Gm44223-201ENSMUST00000204854 114 ntBASIC4.07□□□□□ -1.76
Usp40Q8BWR4 Gm30146-201ENSMUST00000206564 605 ntTSL 1 (best) BASIC4.07□□□□□ -1.76
Usp40Q8BWR4 Skint3-201ENSMUST00000038455 3627 ntAPPRIS P3 TSL 1 (best) BASIC4.07□□□□□ -1.76
Usp40Q8BWR4 Olfr65-203ENSMUST00000214300 2855 ntAPPRIS ALT1 TSL 5 BASIC4.07□□□□□ -1.76
Usp40Q8BWR4 4932415D10Rik-202ENSMUST00000217661 15111 ntAPPRIS P1 TSL 5 BASIC4.07□□□□□ -1.76
Usp40Q8BWR4 Gm43879-201ENSMUST00000203811 3760 ntBASIC4.07□□□□□ -1.76
Usp40Q8BWR4 CT025577.1-201ENSMUST00000220862 2846 ntBASIC4.07□□□□□ -1.76
Usp40Q8BWR4 Olfr124-204ENSMUST00000217365 4365 ntAPPRIS P1 TSL 5 BASIC4.06□□□□□ -1.76
Usp40Q8BWR4 Gm36944-201ENSMUST00000192257 2759 ntBASIC4.06□□□□□ -1.76
Usp40Q8BWR4 Cp-204ENSMUST00000108328 4504 ntAPPRIS ALT2 TSL 1 (best) BASIC4.06□□□□□ -1.76
Usp40Q8BWR4 Mir499-201ENSMUST00000102357 79 ntBASIC4.06□□□□□ -1.76
Usp40Q8BWR4 Gm23651-201ENSMUST00000116755 120 ntBASIC4.06□□□□□ -1.76
Usp40Q8BWR4 Gm14894-201ENSMUST00000117170 270 ntBASIC4.06□□□□□ -1.76
Usp40Q8BWR4 Gm11367-201ENSMUST00000117802 120 ntBASIC4.06□□□□□ -1.76
Usp40Q8BWR4 Gm13210-201ENSMUST00000121483 273 ntBASIC4.06□□□□□ -1.76
Usp40Q8BWR4 Gm15065-201ENSMUST00000121699 273 ntBASIC4.06□□□□□ -1.76
Usp40Q8BWR4 Gm15008-201ENSMUST00000147429 460 ntTSL 3 BASIC4.06□□□□□ -1.76
Usp40Q8BWR4 Gm23982-201ENSMUST00000157141 106 ntBASIC4.06□□□□□ -1.76
Usp40Q8BWR4 Gm25280-201ENSMUST00000157269 101 ntBASIC4.06□□□□□ -1.76
Usp40Q8BWR4 Gm25054-201ENSMUST00000157370 97 ntBASIC4.06□□□□□ -1.76
Usp40Q8BWR4 Gm22098-201ENSMUST00000157930 85 ntBASIC4.06□□□□□ -1.76
Usp40Q8BWR4 Gm21980-201ENSMUST00000180032 143 ntTSL 5 BASIC4.06□□□□□ -1.76
Usp40Q8BWR4 Gm28623-201ENSMUST00000187219 192 ntBASIC4.06□□□□□ -1.76
Usp40Q8BWR4 Gm37449-201ENSMUST00000193016 270 ntBASIC4.06□□□□□ -1.76
Usp40Q8BWR4 Gm18658-201ENSMUST00000195558 270 ntBASIC4.06□□□□□ -1.76
Usp40Q8BWR4 Gm36551-201ENSMUST00000196787 300 ntTSL 5 BASIC4.06□□□□□ -1.76
Usp40Q8BWR4 AC192091.2-201ENSMUST00000217869 117 ntBASIC4.06□□□□□ -1.76
Usp40Q8BWR4 Gm25698-201ENSMUST00000082897 107 ntBASIC4.06□□□□□ -1.76
Usp40Q8BWR4 Olfr968-202ENSMUST00000216458 4630 ntAPPRIS P1 TSL 5 BASIC4.06□□□□□ -1.76
Usp40Q8BWR4 AC158979.1-201ENSMUST00000223594 2252 ntBASIC4.06□□□□□ -1.76
Usp40Q8BWR4 AC153887.2-201ENSMUST00000219160 3838 ntBASIC4.06□□□□□ -1.76
Retrieved 100 of 76,532 protein–RNA pairs in 485.9 ms