Protein–RNA interactions for Protein: Q8BTS4

Nup54, Nuclear pore complex protein Nup54, mousemouse

Known RBP Predictions only

Length 510 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nup54Q8BTS4 Gm26501-201ENSMUST00000178307 107 ntBASIC2.13□□□□□ -2.07
Nup54Q8BTS4 Olfr546-ps1-201ENSMUST00000210328 326 ntBASIC2.13□□□□□ -2.07
Nup54Q8BTS4 AC100590.3-201ENSMUST00000219355 332 ntTSL 5 BASIC2.13□□□□□ -2.07
Nup54Q8BTS4 Klra3-201ENSMUST00000088017 984 ntAPPRIS P1 TSL 1 (best) BASIC2.13□□□□□ -2.07
Nup54Q8BTS4 Gm23202-201ENSMUST00000104376 129 ntBASIC2.12□□□□□ -2.07
Nup54Q8BTS4 Mir466f-3-201ENSMUST00000104788 94 ntBASIC2.12□□□□□ -2.07
Nup54Q8BTS4 Gm11060-201ENSMUST00000111107 72 ntAPPRIS P1 TSL 5 BASIC2.12□□□□□ -2.07
Nup54Q8BTS4 Gm13475-201ENSMUST00000119290 234 ntBASIC2.12□□□□□ -2.07
Nup54Q8BTS4 Gm14530-201ENSMUST00000122391 333 ntBASIC2.12□□□□□ -2.07
Nup54Q8BTS4 Gm22037-201ENSMUST00000157280 296 ntBASIC2.12□□□□□ -2.07
Nup54Q8BTS4 Ear-ps8-201ENSMUST00000161935 354 ntBASIC2.12□□□□□ -2.07
Nup54Q8BTS4 Gm15446-203ENSMUST00000170826 192 ntTSL 5 BASIC2.12□□□□□ -2.07
Nup54Q8BTS4 Vmn1r-ps23-201ENSMUST00000175708 295 ntBASIC2.12□□□□□ -2.07
Nup54Q8BTS4 Gm26430-201ENSMUST00000178054 107 ntBASIC2.12□□□□□ -2.07
Nup54Q8BTS4 Gm27753-201ENSMUST00000184742 203 ntBASIC2.12□□□□□ -2.07
Nup54Q8BTS4 Mir195b-201ENSMUST00000184814 97 ntBASIC2.12□□□□□ -2.07
Nup54Q8BTS4 Gm20937-202ENSMUST00000189084 811 ntTSL 1 (best) BASIC2.12□□□□□ -2.07
Nup54Q8BTS4 Gm28414-201ENSMUST00000190111 294 ntBASIC2.12□□□□□ -2.07
Nup54Q8BTS4 Trav5d-2-201ENSMUST00000196107 275 ntBASIC2.12□□□□□ -2.07
Nup54Q8BTS4 Trav5n-2-201ENSMUST00000197136 275 ntBASIC2.12□□□□□ -2.07
Nup54Q8BTS4 Gm45375-201ENSMUST00000210338 280 ntBASIC2.12□□□□□ -2.07
Nup54Q8BTS4 Gm17990-201ENSMUST00000211728 553 ntBASIC2.12□□□□□ -2.07
Nup54Q8BTS4 AC157017.1-201ENSMUST00000220148 364 ntBASIC2.12□□□□□ -2.07
Nup54Q8BTS4 Gm9318-201ENSMUST00000222444 438 ntBASIC2.12□□□□□ -2.07
Nup54Q8BTS4 AC104832.1-201ENSMUST00000222938 550 ntBASIC2.12□□□□□ -2.07
Nup54Q8BTS4 AC144628.2-201ENSMUST00000227374 352 ntBASIC2.12□□□□□ -2.07
Nup54Q8BTS4 AC183096.2-201ENSMUST00000228733 457 ntBASIC2.12□□□□□ -2.07
Nup54Q8BTS4 Mir222-201ENSMUST00000083537 79 ntBASIC2.12□□□□□ -2.07
Nup54Q8BTS4 Gm10192-201ENSMUST00000086672 327 ntAPPRIS P1 BASIC2.12□□□□□ -2.07
Nup54Q8BTS4 Gm26345-201ENSMUST00000157534 120 ntBASIC2.11□□□□□ -2.07
Nup54Q8BTS4 Gm27396-201ENSMUST00000157708 58 ntBASIC2.11□□□□□ -2.07
Nup54Q8BTS4 4930579O11Rik-202ENSMUST00000168243 672 ntTSL 3 BASIC2.11□□□□□ -2.07
Nup54Q8BTS4 Vmn1r-ps9-201ENSMUST00000177047 358 ntBASIC2.11□□□□□ -2.07
Nup54Q8BTS4 Mir7016-201ENSMUST00000184308 72 ntBASIC2.11□□□□□ -2.07
Nup54Q8BTS4 Scgb1b1-ps-201ENSMUST00000189264 268 ntBASIC2.11□□□□□ -2.07
Nup54Q8BTS4 Gm40040-202ENSMUST00000196337 305 ntTSL 3 BASIC2.11□□□□□ -2.07
Nup54Q8BTS4 Gm18971-201ENSMUST00000197240 374 ntBASIC2.11□□□□□ -2.07
Nup54Q8BTS4 Olfr717-ps1-201ENSMUST00000205589 556 ntBASIC2.11□□□□□ -2.07
Nup54Q8BTS4 Olfr1435-ps1-201ENSMUST00000207773 249 ntBASIC2.11□□□□□ -2.07
Nup54Q8BTS4 Gm45556-201ENSMUST00000210689 345 ntTSL 5 BASIC2.11□□□□□ -2.07
Nup54Q8BTS4 2610044O15Rik8-201ENSMUST00000079272 264 ntTSL 5 BASIC2.11□□□□□ -2.07
Nup54Q8BTS4 Snora69-201ENSMUST00000083708 131 ntBASIC2.11□□□□□ -2.07
Nup54Q8BTS4 BC100530-201ENSMUST00000096089 619 ntAPPRIS P1 TSL 1 (best) BASIC2.11□□□□□ -2.07
Nup54Q8BTS4 Trdj2-201ENSMUST00000103683 59 ntAPPRIS P1 BASIC2.1□□□□□ -2.07
Nup54Q8BTS4 Gm3788-201ENSMUST00000119949 136 ntBASIC2.1□□□□□ -2.07
Nup54Q8BTS4 Dnal1-203ENSMUST00000136159 403 ntTSL 5 BASIC2.1□□□□□ -2.07
Nup54Q8BTS4 Gm23169-201ENSMUST00000157157 112 ntBASIC2.1□□□□□ -2.07
Nup54Q8BTS4 Gm23557-201ENSMUST00000157820 138 ntBASIC2.1□□□□□ -2.07
Nup54Q8BTS4 Gm22483-201ENSMUST00000157986 274 ntBASIC2.1□□□□□ -2.07
Nup54Q8BTS4 Gm27510-201ENSMUST00000158214 64 ntBASIC2.1□□□□□ -2.07
Nup54Q8BTS4 Gm23342-201ENSMUST00000158958 115 ntBASIC2.1□□□□□ -2.07
Nup54Q8BTS4 Gm26194-201ENSMUST00000175036 71 ntBASIC2.1□□□□□ -2.07
Nup54Q8BTS4 Gm22192-201ENSMUST00000175128 85 ntBASIC2.1□□□□□ -2.07
Nup54Q8BTS4 Gm27443-201ENSMUST00000184660 98 ntBASIC2.1□□□□□ -2.07
Nup54Q8BTS4 Gm34411-201ENSMUST00000201180 280 ntTSL 3 BASIC2.1□□□□□ -2.07
Nup54Q8BTS4 AC164567.2-201ENSMUST00000219363 445 ntBASIC2.1□□□□□ -2.07
Nup54Q8BTS4 AC158606.1-201ENSMUST00000220078 325 ntBASIC2.1□□□□□ -2.07
Nup54Q8BTS4 Rny3-201ENSMUST00000083011 102 ntBASIC2.1□□□□□ -2.07
Nup54Q8BTS4 Gm25632-201ENSMUST00000083112 85 ntBASIC2.1□□□□□ -2.07
Nup54Q8BTS4 Mir30d-201ENSMUST00000083503 82 ntBASIC2.1□□□□□ -2.07
Nup54Q8BTS4 Olfr1201-203ENSMUST00000216213 2602 ntAPPRIS P1 TSL 5 BASIC2.1□□□□□ -2.07
Nup54Q8BTS4 Gm44578-201ENSMUST00000207236 3835 ntBASIC2.1□□□□□ -2.07
Nup54Q8BTS4 Gm43753-201ENSMUST00000196539 3309 ntBASIC2.09□□□□□ -2.07
Nup54Q8BTS4 Gm38255-201ENSMUST00000194910 2996 ntBASIC2.09□□□□□ -2.07
Nup54Q8BTS4 Gm26077-201ENSMUST00000104064 123 ntBASIC2.09□□□□□ -2.07
Nup54Q8BTS4 Rps15a-ps6-201ENSMUST00000117476 393 ntBASIC2.09□□□□□ -2.07
Nup54Q8BTS4 Gm13378-201ENSMUST00000117483 336 ntBASIC2.09□□□□□ -2.07
Nup54Q8BTS4 Gm13457-201ENSMUST00000117885 267 ntBASIC2.09□□□□□ -2.07
Nup54Q8BTS4 Rpl31-ps6-201ENSMUST00000119959 378 ntBASIC2.09□□□□□ -2.07
Nup54Q8BTS4 Gm14402-201ENSMUST00000122217 508 ntBASIC2.09□□□□□ -2.07
Nup54Q8BTS4 Gm24481-201ENSMUST00000157210 102 ntBASIC2.09□□□□□ -2.07
Nup54Q8BTS4 Gm25454-201ENSMUST00000157947 315 ntBASIC2.09□□□□□ -2.07
Nup54Q8BTS4 Gm24857-201ENSMUST00000158061 310 ntBASIC2.09□□□□□ -2.07
Nup54Q8BTS4 Gm22666-201ENSMUST00000158717 164 ntBASIC2.09□□□□□ -2.07
Nup54Q8BTS4 Obox4-ps34-201ENSMUST00000175879 520 ntBASIC2.09□□□□□ -2.07
Nup54Q8BTS4 Gm27588-201ENSMUST00000185096 263 ntBASIC2.09□□□□□ -2.07
Nup54Q8BTS4 Gm27959-201ENSMUST00000185172 111 ntBASIC2.09□□□□□ -2.07
Nup54Q8BTS4 Gm28740-201ENSMUST00000186142 215 ntBASIC2.09□□□□□ -2.07
Nup54Q8BTS4 Trbv18-201ENSMUST00000194256 294 ntBASIC2.09□□□□□ -2.07
Nup54Q8BTS4 Gm34073-201ENSMUST00000195736 212 ntBASIC2.09□□□□□ -2.07
Nup54Q8BTS4 Gm44024-201ENSMUST00000203008 476 ntBASIC2.09□□□□□ -2.07
Nup54Q8BTS4 1700030L22Rik-201ENSMUST00000221214 567 ntTSL 5 BASIC2.09□□□□□ -2.07
Nup54Q8BTS4 AC126554.1-201ENSMUST00000222161 271 ntBASIC2.09□□□□□ -2.07
Nup54Q8BTS4 CT010480.1-201ENSMUST00000223612 363 ntBASIC2.09□□□□□ -2.07
Nup54Q8BTS4 Gm23627-201ENSMUST00000082459 107 ntBASIC2.09□□□□□ -2.07
Nup54Q8BTS4 Gm22502-201ENSMUST00000082488 107 ntBASIC2.09□□□□□ -2.07
Nup54Q8BTS4 Gm22977-201ENSMUST00000082615 107 ntBASIC2.09□□□□□ -2.07
Nup54Q8BTS4 Gm24149-201ENSMUST00000082757 107 ntBASIC2.09□□□□□ -2.07
Nup54Q8BTS4 Gm25579-201ENSMUST00000083407 106 ntBASIC2.09□□□□□ -2.07
Nup54Q8BTS4 Mir322-201ENSMUST00000083484 95 ntBASIC2.09□□□□□ -2.07
Nup54Q8BTS4 Gm25207-201ENSMUST00000093745 107 ntBASIC2.09□□□□□ -2.07
Nup54Q8BTS4 Crisp1-201ENSMUST00000026498 1416 ntAPPRIS P1 TSL 1 (best) BASIC2.08□□□□□ -2.08
Nup54Q8BTS4 Gm45393-201ENSMUST00000211634 2631 ntBASIC2.08□□□□□ -2.08
Nup54Q8BTS4 Gm45652-201ENSMUST00000210926 3831 ntBASIC2.08□□□□□ -2.08
Nup54Q8BTS4 Olfr801-203ENSMUST00000213294 4045 ntAPPRIS P1 TSL 5 BASIC2.08□□□□□ -2.08
Nup54Q8BTS4 Gm6806-201ENSMUST00000120092 1006 ntBASIC2.08□□□□□ -2.08
Nup54Q8BTS4 Gm16355-201ENSMUST00000128606 231 ntBASIC2.08□□□□□ -2.08
Nup54Q8BTS4 Gm23331-201ENSMUST00000157423 108 ntBASIC2.08□□□□□ -2.08
Nup54Q8BTS4 Gm25384-201ENSMUST00000157807 105 ntBASIC2.08□□□□□ -2.08
Nup54Q8BTS4 Gm25460-201ENSMUST00000157954 127 ntBASIC2.08□□□□□ -2.08
Retrieved 100 of 76,532 protein–RNA pairs in 101.9 ms