Protein–RNA interactions for Protein: Q8BI79

Ccdc40, Coiled-coil domain-containing protein 40, mousemouse

Predictions only

Length 1,192 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc40Q8BI79 Gm20613-201ENSMUST00000175828 345 ntBASIC1.88□□□□□ -2.11
Ccdc40Q8BI79 Mir7678-201ENSMUST00000185076 71 ntBASIC1.88□□□□□ -2.11
Ccdc40Q8BI79 Gm44446-201ENSMUST00000204864 255 ntBASIC1.88□□□□□ -2.11
Ccdc40Q8BI79 AC153968.2-201ENSMUST00000215579 1140 ntBASIC1.88□□□□□ -2.11
Ccdc40Q8BI79 Olfr927-ps1-201ENSMUST00000216759 782 ntBASIC1.88□□□□□ -2.11
Ccdc40Q8BI79 AC116465.1-201ENSMUST00000220324 235 ntBASIC1.88□□□□□ -2.11
Ccdc40Q8BI79 Gm23448-201ENSMUST00000083151 104 ntBASIC1.88□□□□□ -2.11
Ccdc40Q8BI79 AC163660.3-201ENSMUST00000224253 1563 ntBASIC1.88□□□□□ -2.11
Ccdc40Q8BI79 Olfr389-203ENSMUST00000215418 3417 ntAPPRIS P1 TSL 5 BASIC1.87□□□□□ -2.11
Ccdc40Q8BI79 Gm14823-201ENSMUST00000117698 238 ntBASIC1.87□□□□□ -2.11
Ccdc40Q8BI79 Gm25102-201ENSMUST00000122479 112 ntBASIC1.87□□□□□ -2.11
Ccdc40Q8BI79 Gm24892-201ENSMUST00000122747 104 ntBASIC1.87□□□□□ -2.11
Ccdc40Q8BI79 Gm21738-201ENSMUST00000177817 681 ntAPPRIS P1 TSL 5 BASIC1.87□□□□□ -2.11
Ccdc40Q8BI79 Gm27959-201ENSMUST00000185172 111 ntBASIC1.87□□□□□ -2.11
Ccdc40Q8BI79 Gm29069-201ENSMUST00000185857 675 ntTSL 3 BASIC1.87□□□□□ -2.11
Ccdc40Q8BI79 Scgb1b13-ps-201ENSMUST00000187330 273 ntBASIC1.87□□□□□ -2.11
Ccdc40Q8BI79 Gm37778-201ENSMUST00000191732 190 ntBASIC1.87□□□□□ -2.11
Ccdc40Q8BI79 Gm8747-201ENSMUST00000195392 751 ntBASIC1.87□□□□□ -2.11
Ccdc40Q8BI79 Gm44256-201ENSMUST00000203304 335 ntBASIC1.87□□□□□ -2.11
Ccdc40Q8BI79 Gm44142-201ENSMUST00000203358 311 ntBASIC1.87□□□□□ -2.11
Ccdc40Q8BI79 Olfr184-ps1-201ENSMUST00000205922 516 ntBASIC1.87□□□□□ -2.11
Ccdc40Q8BI79 Gm45344-201ENSMUST00000211610 341 ntBASIC1.87□□□□□ -2.11
Ccdc40Q8BI79 AC153864.2-201ENSMUST00000220424 292 ntBASIC1.87□□□□□ -2.11
Ccdc40Q8BI79 Defb21-201ENSMUST00000070722 427 ntAPPRIS P1 TSL 1 (best) BASIC1.87□□□□□ -2.11
Ccdc40Q8BI79 Gm36669-201ENSMUST00000201757 3650 ntTSL 1 (best) BASIC1.86□□□□□ -2.11
Ccdc40Q8BI79 Lipi-201ENSMUST00000062721 2082 ntAPPRIS P1 TSL 1 (best) BASIC1.86□□□□□ -2.11
Ccdc40Q8BI79 Vmn1r83-202ENSMUST00000226701 2788 ntAPPRIS P1 BASIC1.86□□□□□ -2.11
Ccdc40Q8BI79 Mir223-201ENSMUST00000102112 110 ntBASIC1.86□□□□□ -2.11
Ccdc40Q8BI79 Gm14678-201ENSMUST00000121396 482 ntBASIC1.86□□□□□ -2.11
Ccdc40Q8BI79 Gm25269-201ENSMUST00000122601 104 ntBASIC1.86□□□□□ -2.11
Ccdc40Q8BI79 Gm24896-201ENSMUST00000122741 135 ntBASIC1.86□□□□□ -2.11
Ccdc40Q8BI79 Gm22328-201ENSMUST00000158074 112 ntBASIC1.86□□□□□ -2.11
Ccdc40Q8BI79 Gm22666-201ENSMUST00000158717 164 ntBASIC1.86□□□□□ -2.11
Ccdc40Q8BI79 Gm24656-201ENSMUST00000177548 132 ntBASIC1.86□□□□□ -2.11
Ccdc40Q8BI79 C230029F24Rik-202ENSMUST00000188673 554 ntTSL 1 (best) BASIC1.86□□□□□ -2.11
Ccdc40Q8BI79 Gm28926-201ENSMUST00000191063 680 ntBASIC1.86□□□□□ -2.11
Ccdc40Q8BI79 Gm35101-201ENSMUST00000219218 243 ntTSL 5 BASIC1.86□□□□□ -2.11
Ccdc40Q8BI79 Gm25586-201ENSMUST00000082499 112 ntBASIC1.86□□□□□ -2.11
Ccdc40Q8BI79 Gm14390-201ENSMUST00000117505 1695 ntBASIC1.86□□□□□ -2.11
Ccdc40Q8BI79 Olfr1253-204ENSMUST00000215988 6332 ntAPPRIS P1 TSL 5 BASIC1.85□□□□□ -2.11
Ccdc40Q8BI79 Gm14412-201ENSMUST00000108959 1581 ntAPPRIS P1 TSL 5 BASIC1.85□□□□□ -2.11
Ccdc40Q8BI79 Gm10721-201ENSMUST00000143083 669 ntAPPRIS P1 TSL 5 BASIC1.85□□□□□ -2.11
Ccdc40Q8BI79 Gm23858-201ENSMUST00000158384 106 ntBASIC1.85□□□□□ -2.11
Ccdc40Q8BI79 Gm22891-201ENSMUST00000158641 164 ntBASIC1.85□□□□□ -2.11
Ccdc40Q8BI79 Gm23548-201ENSMUST00000158963 106 ntBASIC1.85□□□□□ -2.11
Ccdc40Q8BI79 Gm20477-201ENSMUST00000174028 280 ntBASIC1.85□□□□□ -2.11
Ccdc40Q8BI79 Gm25730-201ENSMUST00000178753 165 ntBASIC1.85□□□□□ -2.11
Ccdc40Q8BI79 Gm28437-201ENSMUST00000190277 783 ntBASIC1.85□□□□□ -2.11
Ccdc40Q8BI79 Gm43431-201ENSMUST00000198577 340 ntBASIC1.85□□□□□ -2.11
Ccdc40Q8BI79 Gm35309-201ENSMUST00000208337 478 ntTSL 3 BASIC1.85□□□□□ -2.11
Ccdc40Q8BI79 AC124772.1-201ENSMUST00000221325 151 ntBASIC1.85□□□□□ -2.11
Ccdc40Q8BI79 4930513O06Rik-201ENSMUST00000033625 804 ntAPPRIS P1 TSL 1 (best) BASIC1.85□□□□□ -2.11
Ccdc40Q8BI79 Pip-201ENSMUST00000075351 588 ntAPPRIS P1 TSL 1 (best) BASIC1.85□□□□□ -2.11
Ccdc40Q8BI79 Gm23453-201ENSMUST00000083326 106 ntBASIC1.85□□□□□ -2.11
Ccdc40Q8BI79 Mir322-201ENSMUST00000083484 95 ntBASIC1.85□□□□□ -2.11
Ccdc40Q8BI79 Gm10718-201ENSMUST00000099046 681 ntAPPRIS P1 TSL 5 BASIC1.85□□□□□ -2.11
Ccdc40Q8BI79 Skint5-202ENSMUST00000169631 4497 ntAPPRIS P5 TSL 1 (best) BASIC1.85□□□□□ -2.11
Ccdc40Q8BI79 Gpr174-202ENSMUST00000117310 3536 ntAPPRIS P1 TSL 1 (best) BASIC1.84□□□□□ -2.11
Ccdc40Q8BI79 Gm24338-201ENSMUST00000104205 127 ntBASIC1.84□□□□□ -2.11
Ccdc40Q8BI79 Clec1b-202ENSMUST00000112079 455 ntTSL 1 (best) BASIC1.84□□□□□ -2.11
Ccdc40Q8BI79 n-R5s15-201ENSMUST00000122635 111 ntBASIC1.84□□□□□ -2.11
Ccdc40Q8BI79 Gm22227-201ENSMUST00000157356 259 ntBASIC1.84□□□□□ -2.11
Ccdc40Q8BI79 Gm22082-201ENSMUST00000157587 161 ntBASIC1.84□□□□□ -2.11
Ccdc40Q8BI79 Gm24901-201ENSMUST00000158125 110 ntBASIC1.84□□□□□ -2.11
Ccdc40Q8BI79 Gm24572-201ENSMUST00000175505 88 ntBASIC1.84□□□□□ -2.11
Ccdc40Q8BI79 Gm10715-202ENSMUST00000177969 681 ntAPPRIS P5 TSL 5 BASIC1.84□□□□□ -2.11
Ccdc40Q8BI79 Mir7683-201ENSMUST00000183842 61 ntBASIC1.84□□□□□ -2.11
Ccdc40Q8BI79 Mir195b-201ENSMUST00000184814 97 ntBASIC1.84□□□□□ -2.11
Ccdc40Q8BI79 Gm27624-201ENSMUST00000185047 177 ntBASIC1.84□□□□□ -2.11
Ccdc40Q8BI79 Gm28740-201ENSMUST00000186142 215 ntBASIC1.84□□□□□ -2.11
Ccdc40Q8BI79 Gm42570-201ENSMUST00000195937 292 ntBASIC1.84□□□□□ -2.11
Ccdc40Q8BI79 Gm44181-201ENSMUST00000203106 483 ntBASIC1.84□□□□□ -2.11
Ccdc40Q8BI79 Gm44071-201ENSMUST00000204180 448 ntTSL 1 (best) BASIC1.84□□□□□ -2.11
Ccdc40Q8BI79 Gm18453-201ENSMUST00000208000 626 ntBASIC1.84□□□□□ -2.11
Ccdc40Q8BI79 Vmn2r-ps102-203ENSMUST00000222739 604 ntTSL 5 BASIC1.84□□□□□ -2.11
Ccdc40Q8BI79 Sval3-201ENSMUST00000080742 550 ntAPPRIS P1 TSL 1 (best) BASIC1.84□□□□□ -2.11
Ccdc40Q8BI79 Hmgb1l-201ENSMUST00000082150 571 ntBASIC1.84□□□□□ -2.11
Ccdc40Q8BI79 Gm23100-201ENSMUST00000083455 141 ntBASIC1.84□□□□□ -2.11
Ccdc40Q8BI79 Gm25859-201ENSMUST00000083710 91 ntBASIC1.84□□□□□ -2.11
Ccdc40Q8BI79 Catsperb-201ENSMUST00000055156 3716 ntAPPRIS P1 TSL 1 (best) BASIC1.84□□□□□ -2.12
Ccdc40Q8BI79 Zc3h14-201ENSMUST00000021399 1430 ntTSL 1 (best) BASIC1.83□□□□□ -2.12
Ccdc40Q8BI79 Gm16242-201ENSMUST00000117741 334 ntBASIC1.83□□□□□ -2.12
Ccdc40Q8BI79 Gm24596-201ENSMUST00000122504 107 ntBASIC1.83□□□□□ -2.12
Ccdc40Q8BI79 Oosp2-202ENSMUST00000135994 453 ntAPPRIS ALT2 TSL 3 BASIC1.83□□□□□ -2.12
Ccdc40Q8BI79 Gm24584-201ENSMUST00000157972 107 ntBASIC1.83□□□□□ -2.12
Ccdc40Q8BI79 Gm25333-201ENSMUST00000158035 246 ntBASIC1.83□□□□□ -2.12
Ccdc40Q8BI79 1700129C05Rik-203ENSMUST00000162271 325 ntAPPRIS ALT2 TSL 3 BASIC1.83□□□□□ -2.12
Ccdc40Q8BI79 Gm25707-201ENSMUST00000175120 96 ntBASIC1.83□□□□□ -2.12
Ccdc40Q8BI79 Gm25211-201ENSMUST00000177553 107 ntBASIC1.83□□□□□ -2.12
Ccdc40Q8BI79 Gm24540-201ENSMUST00000177627 107 ntBASIC1.83□□□□□ -2.12
Ccdc40Q8BI79 Gm25256-201ENSMUST00000177746 107 ntBASIC1.83□□□□□ -2.12
Ccdc40Q8BI79 Gm24315-201ENSMUST00000177835 127 ntBASIC1.83□□□□□ -2.12
Ccdc40Q8BI79 Gm22822-201ENSMUST00000177941 107 ntBASIC1.83□□□□□ -2.12
Ccdc40Q8BI79 Rnu6-201ENSMUST00000178023 107 ntBASIC1.83□□□□□ -2.12
Ccdc40Q8BI79 Gm23151-201ENSMUST00000178061 107 ntBASIC1.83□□□□□ -2.12
Ccdc40Q8BI79 Gm25245-201ENSMUST00000178139 107 ntBASIC1.83□□□□□ -2.12
Ccdc40Q8BI79 Gm24753-201ENSMUST00000178183 107 ntBASIC1.83□□□□□ -2.12
Ccdc40Q8BI79 Gm25829-201ENSMUST00000178275 107 ntBASIC1.83□□□□□ -2.12
Ccdc40Q8BI79 Gm22092-201ENSMUST00000178290 107 ntBASIC1.83□□□□□ -2.12
Ccdc40Q8BI79 Gm24486-201ENSMUST00000178420 107 ntBASIC1.83□□□□□ -2.12
Retrieved 100 of 76,532 protein–RNA pairs in 80.7 ms