Protein–RNA interactions for Protein: Q78JW9

Ubfd1, Ubiquitin domain-containing protein UBFD1, mousemouse

Predictions only

Length 368 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ubfd1Q78JW9 Mir124a-3-201ENSMUST00000083520 68 ntBASIC2.87□□□□□ -1.95
Ubfd1Q78JW9 Olfr1132-202ENSMUST00000216082 3260 ntAPPRIS P1 TSL 5 BASIC2.87□□□□□ -1.95
Ubfd1Q78JW9 Gpr174-204ENSMUST00000120971 3588 ntAPPRIS P1 TSL 1 (best) BASIC2.87□□□□□ -1.95
Ubfd1Q78JW9 Olfr849-202ENSMUST00000217273 6140 ntAPPRIS P1 TSL 5 BASIC2.86□□□□□ -1.95
Ubfd1Q78JW9 Gm44230-201ENSMUST00000203032 3550 ntBASIC2.86□□□□□ -1.95
Ubfd1Q78JW9 Pak3-203ENSMUST00000112864 8612 ntAPPRIS P3 TSL 1 (best) BASIC2.86□□□□□ -1.95
Ubfd1Q78JW9 Gm11862-201ENSMUST00000119678 659 ntBASIC2.86□□□□□ -1.95
Ubfd1Q78JW9 Gm16533-201ENSMUST00000140035 228 ntBASIC2.86□□□□□ -1.95
Ubfd1Q78JW9 Gm24958-201ENSMUST00000158009 97 ntBASIC2.86□□□□□ -1.95
Ubfd1Q78JW9 Mir6355-201ENSMUST00000183687 106 ntBASIC2.86□□□□□ -1.95
Ubfd1Q78JW9 Gm27700-201ENSMUST00000185003 81 ntBASIC2.86□□□□□ -1.95
Ubfd1Q78JW9 Gm6060-201ENSMUST00000188671 251 ntBASIC2.86□□□□□ -1.95
Ubfd1Q78JW9 Gm36551-201ENSMUST00000196787 300 ntTSL 5 BASIC2.86□□□□□ -1.95
Ubfd1Q78JW9 Mir3970-201ENSMUST00000199287 90 ntBASIC2.86□□□□□ -1.95
Ubfd1Q78JW9 Gm9967-203ENSMUST00000206903 408 ntTSL 3 BASIC2.86□□□□□ -1.95
Ubfd1Q78JW9 AC155715.1-201ENSMUST00000213575 463 ntBASIC2.86□□□□□ -1.95
Ubfd1Q78JW9 AC164161.1-201ENSMUST00000214076 639 ntBASIC2.86□□□□□ -1.95
Ubfd1Q78JW9 D730003K21Rik-201ENSMUST00000215052 589 ntTSL 2 BASIC2.86□□□□□ -1.95
Ubfd1Q78JW9 AC167721.1-201ENSMUST00000217088 279 ntBASIC2.86□□□□□ -1.95
Ubfd1Q78JW9 Serf1-201ENSMUST00000022145 601 ntAPPRIS P1 TSL 1 (best) BASIC2.86□□□□□ -1.95
Ubfd1Q78JW9 CT030182.3-201ENSMUST00000225986 582 ntBASIC2.86□□□□□ -1.95
Ubfd1Q78JW9 Gm23731-201ENSMUST00000083749 107 ntBASIC2.86□□□□□ -1.95
Ubfd1Q78JW9 Gpr82-201ENSMUST00000053659 2497 ntAPPRIS P1 TSL 1 (best) BASIC2.86□□□□□ -1.95
Ubfd1Q78JW9 Olfr1258-201ENSMUST00000102609 7007 ntAPPRIS P1 TSL 3 BASIC2.86□□□□□ -1.95
Ubfd1Q78JW9 Gm18751-201ENSMUST00000185777 2013 ntBASIC2.86□□□□□ -1.95
Ubfd1Q78JW9 Olfr611-202ENSMUST00000216074 2301 ntAPPRIS P1 TSL 5 BASIC2.86□□□□□ -1.95
Ubfd1Q78JW9 Zfp979-201ENSMUST00000037565 2558 ntAPPRIS P1 TSL 2 BASIC2.85□□□□□ -1.95
Ubfd1Q78JW9 Olfr652-204ENSMUST00000219111 5329 ntAPPRIS P1 TSL 5 BASIC2.85□□□□□ -1.95
Ubfd1Q78JW9 Gm12956-201ENSMUST00000122184 414 ntBASIC2.85□□□□□ -1.95
Ubfd1Q78JW9 Gm22447-201ENSMUST00000158155 92 ntBASIC2.85□□□□□ -1.95
Ubfd1Q78JW9 Gm21798-201ENSMUST00000180105 261 ntAPPRIS P1 TSL 5 BASIC2.85□□□□□ -1.95
Ubfd1Q78JW9 Mir6917-201ENSMUST00000184111 61 ntBASIC2.85□□□□□ -1.95
Ubfd1Q78JW9 Gm28848-201ENSMUST00000189984 168 ntBASIC2.85□□□□□ -1.95
Ubfd1Q78JW9 Gm42594-201ENSMUST00000199511 246 ntBASIC2.85□□□□□ -1.95
Ubfd1Q78JW9 Gm44459-201ENSMUST00000203926 160 ntBASIC2.85□□□□□ -1.95
Ubfd1Q78JW9 Olfr277-ps1-201ENSMUST00000205749 285 ntBASIC2.85□□□□□ -1.95
Ubfd1Q78JW9 Gm45005-201ENSMUST00000206640 157 ntBASIC2.85□□□□□ -1.95
Ubfd1Q78JW9 Gm38211-201ENSMUST00000192814 7217 ntBASIC2.85□□□□□ -1.95
Ubfd1Q78JW9 Gm26573-201ENSMUST00000181199 3020 ntTSL 5 BASIC2.85□□□□□ -1.95
Ubfd1Q78JW9 Vmn1r83-202ENSMUST00000226701 2788 ntAPPRIS P1 BASIC2.84□□□□□ -1.95
Ubfd1Q78JW9 Cyp3a59-201ENSMUST00000035571 1990 ntAPPRIS P1 TSL 1 (best) BASIC2.84□□□□□ -1.95
Ubfd1Q78JW9 Gm14971-201ENSMUST00000117980 663 ntBASIC2.84□□□□□ -1.95
Ubfd1Q78JW9 Gm24630-201ENSMUST00000122768 106 ntBASIC2.84□□□□□ -1.95
Ubfd1Q78JW9 Gm24726-201ENSMUST00000158232 121 ntBASIC2.84□□□□□ -1.95
Ubfd1Q78JW9 Gm23759-201ENSMUST00000158351 268 ntBASIC2.84□□□□□ -1.95
Ubfd1Q78JW9 Gm24501-201ENSMUST00000158452 62 ntBASIC2.84□□□□□ -1.95
Ubfd1Q78JW9 Gm14435-203ENSMUST00000172025 192 ntTSL 5 BASIC2.84□□□□□ -1.95
Ubfd1Q78JW9 Gm24308-201ENSMUST00000177773 114 ntBASIC2.84□□□□□ -1.95
Ubfd1Q78JW9 Gm26092-201ENSMUST00000179798 97 ntBASIC2.84□□□□□ -1.95
Ubfd1Q78JW9 Mir669a-1-201ENSMUST00000180238 97 ntBASIC2.84□□□□□ -1.95
Ubfd1Q78JW9 Gm28257-201ENSMUST00000185244 463 ntBASIC2.84□□□□□ -1.95
Ubfd1Q78JW9 Gm32250-201ENSMUST00000191885 322 ntTSL 3 BASIC2.84□□□□□ -1.95
Ubfd1Q78JW9 Gm36891-201ENSMUST00000191995 655 ntBASIC2.84□□□□□ -1.95
Ubfd1Q78JW9 Gm38311-201ENSMUST00000192945 165 ntBASIC2.84□□□□□ -1.95
Ubfd1Q78JW9 Gm43250-201ENSMUST00000196536 273 ntBASIC2.84□□□□□ -1.95
Ubfd1Q78JW9 Mir3073b-201ENSMUST00000199383 60 ntBASIC2.84□□□□□ -1.95
Ubfd1Q78JW9 Scgb2b2-202ENSMUST00000205821 357 ntTSL 5 BASIC2.84□□□□□ -1.95
Ubfd1Q78JW9 Tnfrsf23-203ENSMUST00000208017 544 ntTSL 3 BASIC2.84□□□□□ -1.95
Ubfd1Q78JW9 Olfr1315-ps1-202ENSMUST00000208654 945 ntAPPRIS ALT1 BASIC2.84□□□□□ -1.95
Ubfd1Q78JW9 AC168266.1-201ENSMUST00000216024 226 ntBASIC2.84□□□□□ -1.95
Ubfd1Q78JW9 Gm23625-201ENSMUST00000082457 100 ntBASIC2.84□□□□□ -1.95
Ubfd1Q78JW9 Gm14440-201ENSMUST00000098998 192 ntTSL 5 BASIC2.84□□□□□ -1.95
Ubfd1Q78JW9 Olfr1270-204ENSMUST00000215975 4854 ntAPPRIS P1 TSL 5 BASIC2.84□□□□□ -1.96
Ubfd1Q78JW9 Olfr772-202ENSMUST00000214672 2955 ntAPPRIS P1 TSL 5 BASIC2.83□□□□□ -1.96
Ubfd1Q78JW9 Muc16-204ENSMUST00000208663 25437 ntAPPRIS P1 TSL 5 BASIC2.83□□□□□ -1.96
Ubfd1Q78JW9 Skint2-203ENSMUST00000106560 1678 ntAPPRIS ALT2 TSL 1 (best) BASIC2.83□□□□□ -1.96
Ubfd1Q78JW9 Nexn-207ENSMUST00000198460 1785 ntAPPRIS ALT2 TSL 5 BASIC2.83□□□□□ -1.96
Ubfd1Q78JW9 Gm12793-201ENSMUST00000119268 292 ntBASIC2.83□□□□□ -1.96
Ubfd1Q78JW9 Gm14883-201ENSMUST00000120179 157 ntBASIC2.83□□□□□ -1.96
Ubfd1Q78JW9 Gm13725-201ENSMUST00000122139 207 ntBASIC2.83□□□□□ -1.96
Ubfd1Q78JW9 Rps15a-ps5-201ENSMUST00000132586 393 ntBASIC2.83□□□□□ -1.96
Ubfd1Q78JW9 Gm22814-201ENSMUST00000157452 104 ntBASIC2.83□□□□□ -1.96
Ubfd1Q78JW9 Gm22192-201ENSMUST00000175128 85 ntBASIC2.83□□□□□ -1.96
Ubfd1Q78JW9 Gm23268-201ENSMUST00000175494 78 ntBASIC2.83□□□□□ -1.96
Ubfd1Q78JW9 Gm29155-202ENSMUST00000186289 216 ntTSL 5 BASIC2.83□□□□□ -1.96
Ubfd1Q78JW9 Gm3952-201ENSMUST00000195093 573 ntAPPRIS P1 TSL 5 BASIC2.83□□□□□ -1.96
Ubfd1Q78JW9 Gm43193-201ENSMUST00000197732 441 ntBASIC2.83□□□□□ -1.96
Ubfd1Q78JW9 Gm43521-201ENSMUST00000197838 255 ntBASIC2.83□□□□□ -1.96
Ubfd1Q78JW9 Gm43107-201ENSMUST00000198729 255 ntBASIC2.83□□□□□ -1.96
Ubfd1Q78JW9 Gm44473-201ENSMUST00000204039 152 ntBASIC2.83□□□□□ -1.96
Ubfd1Q78JW9 Gm44989-201ENSMUST00000204749 217 ntBASIC2.83□□□□□ -1.96
Ubfd1Q78JW9 Gm44959-201ENSMUST00000209127 231 ntBASIC2.83□□□□□ -1.96
Ubfd1Q78JW9 Gm45296-201ENSMUST00000209625 205 ntBASIC2.83□□□□□ -1.96
Ubfd1Q78JW9 Sprr4-201ENSMUST00000062129 231 ntAPPRIS P1 BASIC2.83□□□□□ -1.96
Ubfd1Q78JW9 n-R5s40-201ENSMUST00000082475 124 ntBASIC2.83□□□□□ -1.96
Ubfd1Q78JW9 Gm25632-201ENSMUST00000083112 85 ntBASIC2.83□□□□□ -1.96
Ubfd1Q78JW9 Mir133a-1-201ENSMUST00000083465 68 ntBASIC2.83□□□□□ -1.96
Ubfd1Q78JW9 Gm23845-201ENSMUST00000083834 152 ntBASIC2.83□□□□□ -1.96
Ubfd1Q78JW9 Vmn1r211-202ENSMUST00000228645 5447 ntAPPRIS P1 BASIC2.83□□□□□ -1.96
Ubfd1Q78JW9 Vmn1r185-202ENSMUST00000226694 5656 ntAPPRIS P1 BASIC2.83□□□□□ -1.96
Ubfd1Q78JW9 Vmn1r185-208ENSMUST00000228004 5682 ntAPPRIS P1 BASIC2.83□□□□□ -1.96
Ubfd1Q78JW9 AC117199.1-201ENSMUST00000219940 3132 ntBASIC2.83□□□□□ -1.96
Ubfd1Q78JW9 Olfr1208-203ENSMUST00000214297 2844 ntAPPRIS P1 TSL 5 BASIC2.83□□□□□ -1.96
Ubfd1Q78JW9 Tlr7-203ENSMUST00000112164 3468 ntAPPRIS P1 TSL 1 (best) BASIC2.83□□□□□ -1.96
Ubfd1Q78JW9 Olfr609-202ENSMUST00000216075 3429 ntAPPRIS P1 TSL 5 BASIC2.82□□□□□ -1.96
Ubfd1Q78JW9 Gm42684-201ENSMUST00000197663 3615 ntBASIC2.82□□□□□ -1.96
Ubfd1Q78JW9 Igkv17-127-201ENSMUST00000103309 341 ntAPPRIS ALT2 BASIC2.82□□□□□ -1.96
Ubfd1Q78JW9 Igkv17-121-201ENSMUST00000103315 350 ntAPPRIS ALT2 BASIC2.82□□□□□ -1.96
Ubfd1Q78JW9 Igkv13-84-201ENSMUST00000103339 347 ntAPPRIS P1 BASIC2.82□□□□□ -1.96
Ubfd1Q78JW9 Gm13329-201ENSMUST00000117063 265 ntBASIC2.82□□□□□ -1.96
Retrieved 100 of 76,532 protein–RNA pairs in 136.9 ms