Protein–RNA interactions for Protein: Q6ZQF0

Topbp1, DNA topoisomerase 2-binding protein 1, mousemouse

Predictions only

Length 1,515 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Topbp1Q6ZQF0 Gm44055-201ENSMUST00000204376 247 ntBASIC0.63□□□□□ -2.31
Topbp1Q6ZQF0 Tnfrsf23-203ENSMUST00000208017 544 ntTSL 3 BASIC0.63□□□□□ -2.31
Topbp1Q6ZQF0 AC114010.1-201ENSMUST00000222060 379 ntBASIC0.63□□□□□ -2.31
Topbp1Q6ZQF0 CT025689.3-201ENSMUST00000223817 301 ntBASIC0.63□□□□□ -2.31
Topbp1Q6ZQF0 Gm14554-201ENSMUST00000119548 661 ntBASIC0.62□□□□□ -2.31
Topbp1Q6ZQF0 Gm2966-201ENSMUST00000166052 481 ntBASIC0.62□□□□□ -2.31
Topbp1Q6ZQF0 Gm25243-201ENSMUST00000174912 207 ntBASIC0.62□□□□□ -2.31
Topbp1Q6ZQF0 Obox3-ps7-201ENSMUST00000176465 410 ntBASIC0.62□□□□□ -2.31
Topbp1Q6ZQF0 Gm18397-201ENSMUST00000176704 587 ntBASIC0.62□□□□□ -2.31
Topbp1Q6ZQF0 Gm29460-201ENSMUST00000188607 714 ntBASIC0.62□□□□□ -2.31
Topbp1Q6ZQF0 Gm37291-201ENSMUST00000195637 533 ntTSL 5 BASIC0.62□□□□□ -2.31
Topbp1Q6ZQF0 Gm43402-201ENSMUST00000197159 159 ntBASIC0.62□□□□□ -2.31
Topbp1Q6ZQF0 Gm45092-201ENSMUST00000205944 545 ntTSL 3 BASIC0.62□□□□□ -2.31
Topbp1Q6ZQF0 AC172027.1-201ENSMUST00000217659 337 ntBASIC0.62□□□□□ -2.31
Topbp1Q6ZQF0 Sult3a2-202ENSMUST00000223295 930 ntAPPRIS P1 TSL 5 BASIC0.62□□□□□ -2.31
Topbp1Q6ZQF0 AC166830.2-201ENSMUST00000225821 196 ntBASIC0.62□□□□□ -2.31
Topbp1Q6ZQF0 AC126939.3-201ENSMUST00000226061 166 ntBASIC0.62□□□□□ -2.31
Topbp1Q6ZQF0 Gm9001-201ENSMUST00000121642 399 ntBASIC0.61□□□□□ -2.31
Topbp1Q6ZQF0 Mir28b-201ENSMUST00000175399 80 ntBASIC0.61□□□□□ -2.31
Topbp1Q6ZQF0 Vmn1r-ps47-201ENSMUST00000176694 907 ntBASIC0.61□□□□□ -2.31
Topbp1Q6ZQF0 Gm17771-201ENSMUST00000194477 1147 ntBASIC0.61□□□□□ -2.31
Topbp1Q6ZQF0 Gm44482-201ENSMUST00000199232 103 ntBASIC0.61□□□□□ -2.31
Topbp1Q6ZQF0 Gm44825-201ENSMUST00000207557 150 ntBASIC0.61□□□□□ -2.31
Topbp1Q6ZQF0 Gm44598-201ENSMUST00000207566 150 ntBASIC0.61□□□□□ -2.31
Topbp1Q6ZQF0 mt-Co2-201ENSMUST00000082405 684 ntAPPRIS P1 BASIC0.61□□□□□ -2.31
Topbp1Q6ZQF0 Gm23299-201ENSMUST00000082708 79 ntBASIC0.61□□□□□ -2.31
Topbp1Q6ZQF0 Rpl31-ps1-201ENSMUST00000085128 378 ntBASIC0.61□□□□□ -2.31
Topbp1Q6ZQF0 Olfr1154-203ENSMUST00000215862 2624 ntAPPRIS P1 TSL 5 BASIC0.61□□□□□ -2.31
Topbp1Q6ZQF0 Mir3473a-201ENSMUST00000175011 78 ntBASIC0.6□□□□□ -2.31
Topbp1Q6ZQF0 Gm18635-201ENSMUST00000199020 1060 ntBASIC0.6□□□□□ -2.31
Topbp1Q6ZQF0 Gm43955-201ENSMUST00000204332 142 ntBASIC0.6□□□□□ -2.31
Topbp1Q6ZQF0 Gm44665-201ENSMUST00000205381 251 ntBASIC0.6□□□□□ -2.31
Topbp1Q6ZQF0 Cpxcr1-201ENSMUST00000101269 1596 ntAPPRIS P1 TSL 1 (best) BASIC0.6□□□□□ -2.31
Topbp1Q6ZQF0 Gm26074-201ENSMUST00000104063 129 ntBASIC0.59□□□□□ -2.31
Topbp1Q6ZQF0 Gm11065-201ENSMUST00000111462 228 ntBASIC0.59□□□□□ -2.31
Topbp1Q6ZQF0 Gm24385-201ENSMUST00000122694 350 ntBASIC0.59□□□□□ -2.31
Topbp1Q6ZQF0 Gm22731-201ENSMUST00000158086 94 ntBASIC0.59□□□□□ -2.31
Topbp1Q6ZQF0 Gm25718-201ENSMUST00000158632 118 ntBASIC0.59□□□□□ -2.31
Topbp1Q6ZQF0 Vmn2r-ps62-201ENSMUST00000174119 616 ntBASIC0.59□□□□□ -2.31
Topbp1Q6ZQF0 AC091260.1-201ENSMUST00000216112 229 ntBASIC0.59□□□□□ -2.31
Topbp1Q6ZQF0 AC188459.1-201ENSMUST00000216651 300 ntBASIC0.59□□□□□ -2.31
Topbp1Q6ZQF0 AC167202.1-201ENSMUST00000219027 331 ntBASIC0.59□□□□□ -2.31
Topbp1Q6ZQF0 Gm13356-201ENSMUST00000121678 335 ntBASIC0.59□□□□□ -2.32
Topbp1Q6ZQF0 Gm13782-201ENSMUST00000149515 352 ntTSL 3 BASIC0.59□□□□□ -2.32
Topbp1Q6ZQF0 Gm26870-202ENSMUST00000181572 1143 ntTSL 5 BASIC0.59□□□□□ -2.32
Topbp1Q6ZQF0 B230110G15Rik-201ENSMUST00000190868 772 ntTSL 1 (best) BASIC0.59□□□□□ -2.32
Topbp1Q6ZQF0 Mir3961-201ENSMUST00000198795 59 ntBASIC0.59□□□□□ -2.32
Topbp1Q6ZQF0 Gm10264-201ENSMUST00000220589 429 ntBASIC0.59□□□□□ -2.32
Topbp1Q6ZQF0 CT010454.1-201ENSMUST00000225975 265 ntBASIC0.59□□□□□ -2.32
Topbp1Q6ZQF0 Gm26207-201ENSMUST00000082909 104 ntBASIC0.59□□□□□ -2.32
Topbp1Q6ZQF0 Gm23969-201ENSMUST00000083324 74 ntBASIC0.59□□□□□ -2.32
Topbp1Q6ZQF0 Gm25126-201ENSMUST00000083343 102 ntBASIC0.59□□□□□ -2.32
Topbp1Q6ZQF0 Gm23650-201ENSMUST00000083355 70 ntBASIC0.59□□□□□ -2.32
Topbp1Q6ZQF0 Gm23749-201ENSMUST00000104223 131 ntBASIC0.58□□□□□ -2.32
Topbp1Q6ZQF0 Gm24592-201ENSMUST00000122505 106 ntBASIC0.58□□□□□ -2.32
Topbp1Q6ZQF0 Gm12730-201ENSMUST00000125277 291 ntTSL 5 BASIC0.58□□□□□ -2.32
Topbp1Q6ZQF0 Hmgb3-ps-201ENSMUST00000162465 601 ntBASIC0.58□□□□□ -2.32
Topbp1Q6ZQF0 Mir6370-201ENSMUST00000183510 120 ntBASIC0.58□□□□□ -2.32
Topbp1Q6ZQF0 Gm27660-201ENSMUST00000184028 208 ntBASIC0.58□□□□□ -2.32
Topbp1Q6ZQF0 Gm44391-201ENSMUST00000198490 93 ntBASIC0.58□□□□□ -2.32
Topbp1Q6ZQF0 Gm35077-201ENSMUST00000204999 275 ntTSL 3 BASIC0.58□□□□□ -2.32
Topbp1Q6ZQF0 Gm45387-201ENSMUST00000209792 632 ntBASIC0.58□□□□□ -2.32
Topbp1Q6ZQF0 AC122225.1-201ENSMUST00000215641 369 ntBASIC0.58□□□□□ -2.32
Topbp1Q6ZQF0 AC159709.1-201ENSMUST00000220445 349 ntBASIC0.58□□□□□ -2.32
Topbp1Q6ZQF0 mt-Rnr1-201ENSMUST00000082388 955 ntBASIC0.58□□□□□ -2.32
Topbp1Q6ZQF0 Gm24622-201ENSMUST00000082619 162 ntBASIC0.58□□□□□ -2.32
Topbp1Q6ZQF0 Gm22265-201ENSMUST00000082947 116 ntBASIC0.58□□□□□ -2.32
Topbp1Q6ZQF0 Gm22075-201ENSMUST00000158599 192 ntBASIC0.57□□□□□ -2.32
Topbp1Q6ZQF0 Gm24221-201ENSMUST00000158833 313 ntBASIC0.57□□□□□ -2.32
Topbp1Q6ZQF0 Trav7d-4-201ENSMUST00000178768 451 ntAPPRIS P1 BASIC0.57□□□□□ -2.32
Topbp1Q6ZQF0 Trav7-4-201ENSMUST00000181728 451 ntAPPRIS P1 BASIC0.57□□□□□ -2.32
Topbp1Q6ZQF0 Mir7675-201ENSMUST00000184262 58 ntBASIC0.57□□□□□ -2.32
Topbp1Q6ZQF0 Gm27640-201ENSMUST00000184580 147 ntBASIC0.57□□□□□ -2.32
Topbp1Q6ZQF0 Gm43432-201ENSMUST00000196352 121 ntBASIC0.57□□□□□ -2.32
Topbp1Q6ZQF0 Gm43531-201ENSMUST00000200676 1114 ntBASIC0.57□□□□□ -2.32
Topbp1Q6ZQF0 2900064F13Rik-201ENSMUST00000202166 1008 ntBASIC0.57□□□□□ -2.32
Topbp1Q6ZQF0 AC162934.3-201ENSMUST00000223015 841 ntBASIC0.57□□□□□ -2.32
Topbp1Q6ZQF0 Gm13885-201ENSMUST00000117569 187 ntBASIC0.56□□□□□ -2.32
Topbp1Q6ZQF0 Gm12656-201ENSMUST00000118149 577 ntBASIC0.56□□□□□ -2.32
Topbp1Q6ZQF0 Gm15309-201ENSMUST00000121644 240 ntBASIC0.56□□□□□ -2.32
Topbp1Q6ZQF0 Snrpert-201ENSMUST00000121967 279 ntBASIC0.56□□□□□ -2.32
Topbp1Q6ZQF0 Gm22164-201ENSMUST00000158413 106 ntBASIC0.56□□□□□ -2.32
Topbp1Q6ZQF0 Gm20832-201ENSMUST00000189076 665 ntBASIC0.56□□□□□ -2.32
Topbp1Q6ZQF0 Gm38006-201ENSMUST00000192421 697 ntTSL 5 BASIC0.56□□□□□ -2.32
Topbp1Q6ZQF0 Gm36728-201ENSMUST00000195782 665 ntBASIC0.56□□□□□ -2.32
Topbp1Q6ZQF0 Mir216a-201ENSMUST00000083605 72 ntBASIC0.56□□□□□ -2.32
Topbp1Q6ZQF0 Gm11998-201ENSMUST00000146304 972 ntTSL 1 (best) BASIC0.55□□□□□ -2.32
Topbp1Q6ZQF0 AC159246.1-201ENSMUST00000214478 249 ntBASIC0.55□□□□□ -2.32
Topbp1Q6ZQF0 n-R5s37-201ENSMUST00000082533 118 ntBASIC0.55□□□□□ -2.32
Topbp1Q6ZQF0 Gm22062-201ENSMUST00000082563 107 ntBASIC0.55□□□□□ -2.32
Topbp1Q6ZQF0 Traj35-201ENSMUST00000103706 65 ntAPPRIS P1 BASIC0.54□□□□□ -2.32
Topbp1Q6ZQF0 Gm14657-201ENSMUST00000117461 302 ntBASIC0.54□□□□□ -2.32
Topbp1Q6ZQF0 Nell1os-201ENSMUST00000134584 489 ntTSL 1 (best) BASIC0.54□□□□□ -2.32
Topbp1Q6ZQF0 Gm15243-201ENSMUST00000151101 382 ntTSL 2 BASIC0.54□□□□□ -2.32
Topbp1Q6ZQF0 Gm23983-201ENSMUST00000157142 114 ntBASIC0.54□□□□□ -2.32
Topbp1Q6ZQF0 Gm24808-201ENSMUST00000157993 118 ntBASIC0.54□□□□□ -2.32
Topbp1Q6ZQF0 Ranbp2-ps3-201ENSMUST00000183549 388 ntBASIC0.54□□□□□ -2.32
Topbp1Q6ZQF0 Gm18410-201ENSMUST00000207199 577 ntBASIC0.54□□□□□ -2.32
Topbp1Q6ZQF0 AC160863.1-201ENSMUST00000218412 317 ntBASIC0.54□□□□□ -2.32
Topbp1Q6ZQF0 AC154521.1-201ENSMUST00000222635 330 ntBASIC0.54□□□□□ -2.32
Retrieved 100 of 76,532 protein–RNA pairs in 80.5 ms