Protein–RNA interactions for Protein: Q6ZPL9

Ddx55, ATP-dependent RNA helicase DDX55, mousemouse

Known RBP Predictions only

Length 600 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ddx55Q6ZPL9 4932412D23Rik-203ENSMUST00000142270 4105 ntTSL 1 (best) BASIC3.36□□□□□ -1.87
Ddx55Q6ZPL9 Gm37158-201ENSMUST00000191652 5704 ntBASIC3.36□□□□□ -1.87
Ddx55Q6ZPL9 Olfr186-203ENSMUST00000216415 2323 ntAPPRIS P1 TSL 5 BASIC3.36□□□□□ -1.87
Ddx55Q6ZPL9 Gm37096-201ENSMUST00000192317 2058 ntBASIC3.35□□□□□ -1.87
Ddx55Q6ZPL9 Gm43268-201ENSMUST00000201536 4055 ntBASIC3.35□□□□□ -1.87
Ddx55Q6ZPL9 Gm43879-201ENSMUST00000203811 3760 ntBASIC3.35□□□□□ -1.87
Ddx55Q6ZPL9 Gm42684-201ENSMUST00000197663 3615 ntBASIC3.35□□□□□ -1.87
Ddx55Q6ZPL9 Olfr1325-202ENSMUST00000216007 3617 ntAPPRIS ALT2 TSL 5 BASIC3.35□□□□□ -1.87
Ddx55Q6ZPL9 Gm10563-201ENSMUST00000115821 237 ntAPPRIS P1 TSL 5 BASIC3.35□□□□□ -1.87
Ddx55Q6ZPL9 Gm13880-201ENSMUST00000118421 474 ntBASIC3.35□□□□□ -1.87
Ddx55Q6ZPL9 Gm24348-201ENSMUST00000158710 130 ntBASIC3.35□□□□□ -1.87
Ddx55Q6ZPL9 Gm25643-201ENSMUST00000158874 103 ntBASIC3.35□□□□□ -1.87
Ddx55Q6ZPL9 Gm22500-201ENSMUST00000158982 99 ntBASIC3.35□□□□□ -1.87
Ddx55Q6ZPL9 Gm17100-201ENSMUST00000168963 272 ntBASIC3.35□□□□□ -1.87
Ddx55Q6ZPL9 Gm26426-201ENSMUST00000177866 123 ntBASIC3.35□□□□□ -1.87
Ddx55Q6ZPL9 Gm26060-201ENSMUST00000180094 123 ntBASIC3.35□□□□□ -1.87
Ddx55Q6ZPL9 Mir9-1-201ENSMUST00000199907 89 ntBASIC3.35□□□□□ -1.87
Ddx55Q6ZPL9 Gm34648-201ENSMUST00000202460 338 ntTSL 2 BASIC3.35□□□□□ -1.87
Ddx55Q6ZPL9 Gm44524-201ENSMUST00000203899 271 ntBASIC3.35□□□□□ -1.87
Ddx55Q6ZPL9 AC164161.1-201ENSMUST00000214076 639 ntBASIC3.35□□□□□ -1.87
Ddx55Q6ZPL9 AC123803.1-201ENSMUST00000216093 189 ntBASIC3.35□□□□□ -1.87
Ddx55Q6ZPL9 Gm40810-201ENSMUST00000219149 253 ntBASIC3.35□□□□□ -1.87
Ddx55Q6ZPL9 AC173345.1-201ENSMUST00000222837 306 ntTSL 5 BASIC3.35□□□□□ -1.87
Ddx55Q6ZPL9 Gm13479-201ENSMUST00000130773 4722 ntTSL 1 (best) BASIC3.35□□□□□ -1.87
Ddx55Q6ZPL9 Ccr3-201ENSMUST00000039171 3272 ntAPPRIS P1 TSL 1 (best) BASIC3.35□□□□□ -1.87
Ddx55Q6ZPL9 Olfr1046-202ENSMUST00000213987 2770 ntAPPRIS P1 TSL 5 BASIC3.34□□□□□ -1.87
Ddx55Q6ZPL9 Olfr803-202ENSMUST00000204641 2385 ntAPPRIS P1 TSL 5 BASIC3.34□□□□□ -1.87
Ddx55Q6ZPL9 Olfr299-202ENSMUST00000217253 4479 ntAPPRIS P1 TSL 5 BASIC3.34□□□□□ -1.87
Ddx55Q6ZPL9 Trav7-2-201ENSMUST00000103636 336 ntAPPRIS P1 BASIC3.34□□□□□ -1.87
Ddx55Q6ZPL9 Gm23128-201ENSMUST00000104257 132 ntBASIC3.34□□□□□ -1.87
Ddx55Q6ZPL9 Gm26247-201ENSMUST00000116702 91 ntBASIC3.34□□□□□ -1.87
Ddx55Q6ZPL9 Defa-ps8-201ENSMUST00000120972 279 ntBASIC3.34□□□□□ -1.87
Ddx55Q6ZPL9 Gm24879-201ENSMUST00000158386 143 ntBASIC3.34□□□□□ -1.87
Ddx55Q6ZPL9 Vmn1r-ps83-201ENSMUST00000172677 705 ntBASIC3.34□□□□□ -1.87
Ddx55Q6ZPL9 Gm23141-201ENSMUST00000178682 94 ntBASIC3.34□□□□□ -1.87
Ddx55Q6ZPL9 Pnrc2-203ENSMUST00000180300 171 ntTSL 1 (best) BASIC3.34□□□□□ -1.87
Ddx55Q6ZPL9 Gm2719-201ENSMUST00000191929 444 ntBASIC3.34□□□□□ -1.87
Ddx55Q6ZPL9 Gm38060-201ENSMUST00000194822 464 ntBASIC3.34□□□□□ -1.87
Ddx55Q6ZPL9 Gm42439-201ENSMUST00000195931 486 ntTSL 3 BASIC3.34□□□□□ -1.87
Ddx55Q6ZPL9 Gm23128-202ENSMUST00000196578 133 ntBASIC3.34□□□□□ -1.87
Ddx55Q6ZPL9 Gm44320-201ENSMUST00000199276 86 ntBASIC3.34□□□□□ -1.87
Ddx55Q6ZPL9 Trav7d-2-201ENSMUST00000200127 337 ntAPPRIS P1 BASIC3.34□□□□□ -1.87
Ddx55Q6ZPL9 Gm44633-201ENSMUST00000205925 439 ntTSL 3 BASIC3.34□□□□□ -1.87
Ddx55Q6ZPL9 Vmn2r-ps50-201ENSMUST00000209317 120 ntBASIC3.34□□□□□ -1.87
Ddx55Q6ZPL9 AC160984.2-201ENSMUST00000224927 791 ntBASIC3.34□□□□□ -1.87
Ddx55Q6ZPL9 Gm26497-201ENSMUST00000083146 107 ntBASIC3.34□□□□□ -1.87
Ddx55Q6ZPL9 Vmn1r80-205ENSMUST00000227755 10455 ntAPPRIS P1 BASIC3.34□□□□□ -1.87
Ddx55Q6ZPL9 Gm44715-201ENSMUST00000209049 3839 ntBASIC3.34□□□□□ -1.88
Ddx55Q6ZPL9 Naaladl2-202ENSMUST00000203414 9330 ntAPPRIS P1 TSL 5 BASIC3.34□□□□□ -1.88
Ddx55Q6ZPL9 Vmn1r219-204ENSMUST00000228113 5639 ntAPPRIS P1 BASIC3.33□□□□□ -1.88
Ddx55Q6ZPL9 Olfr918-202ENSMUST00000215461 3783 ntAPPRIS ALT2 TSL 5 BASIC3.33□□□□□ -1.88
Ddx55Q6ZPL9 Olfr1325-203ENSMUST00000216108 3535 ntAPPRIS ALT2 TSL 5 BASIC3.33□□□□□ -1.88
Ddx55Q6ZPL9 Mir875-201ENSMUST00000104698 78 ntBASIC3.33□□□□□ -1.88
Ddx55Q6ZPL9 Gm12934-201ENSMUST00000119221 343 ntBASIC3.33□□□□□ -1.88
Ddx55Q6ZPL9 DQ267100-201ENSMUST00000122600 72 ntBASIC3.33□□□□□ -1.88
Ddx55Q6ZPL9 Gm15669-201ENSMUST00000147834 526 ntTSL 3 BASIC3.33□□□□□ -1.88
Ddx55Q6ZPL9 Mir3076-201ENSMUST00000175415 60 ntBASIC3.33□□□□□ -1.88
Ddx55Q6ZPL9 Gm25450-201ENSMUST00000179144 107 ntBASIC3.33□□□□□ -1.88
Ddx55Q6ZPL9 Gm27402-201ENSMUST00000183890 120 ntBASIC3.33□□□□□ -1.88
Ddx55Q6ZPL9 Gm27921-201ENSMUST00000183968 108 ntBASIC3.33□□□□□ -1.88
Ddx55Q6ZPL9 Gm36946-201ENSMUST00000192706 435 ntBASIC3.33□□□□□ -1.88
Ddx55Q6ZPL9 Gm43250-201ENSMUST00000196536 273 ntBASIC3.33□□□□□ -1.88
Ddx55Q6ZPL9 Igkv15-102-201ENSMUST00000197885 287 ntBASIC3.33□□□□□ -1.88
Ddx55Q6ZPL9 Igkv13-80-1-201ENSMUST00000197926 255 ntBASIC3.33□□□□□ -1.88
Ddx55Q6ZPL9 Gm8013-201ENSMUST00000200139 462 ntTSL 2 BASIC3.33□□□□□ -1.88
Ddx55Q6ZPL9 Gm45452-201ENSMUST00000210905 177 ntBASIC3.33□□□□□ -1.88
Ddx55Q6ZPL9 CAAA01090905.1-201ENSMUST00000219056 426 ntTSL 2 BASIC3.33□□□□□ -1.88
Ddx55Q6ZPL9 AC158606.1-201ENSMUST00000220078 325 ntBASIC3.33□□□□□ -1.88
Ddx55Q6ZPL9 CT030166.2-201ENSMUST00000222021 368 ntBASIC3.33□□□□□ -1.88
Ddx55Q6ZPL9 AC154271.1-201ENSMUST00000224780 383 ntBASIC3.33□□□□□ -1.88
Ddx55Q6ZPL9 AC124524.1-201ENSMUST00000225833 181 ntBASIC3.33□□□□□ -1.88
Ddx55Q6ZPL9 AC127371.1-202ENSMUST00000228923 306 ntBASIC3.33□□□□□ -1.88
Ddx55Q6ZPL9 Gm23625-201ENSMUST00000082457 100 ntBASIC3.33□□□□□ -1.88
Ddx55Q6ZPL9 Gm25202-201ENSMUST00000082838 191 ntBASIC3.33□□□□□ -1.88
Ddx55Q6ZPL9 Olfr606-203ENSMUST00000217250 2313 ntAPPRIS P1 TSL 5 BASIC3.33□□□□□ -1.88
Ddx55Q6ZPL9 Olfr309-202ENSMUST00000174158 3293 ntAPPRIS P1 TSL 2 BASIC3.33□□□□□ -1.88
Ddx55Q6ZPL9 Zfp934-202ENSMUST00000101547 2147 ntAPPRIS P1 TSL 5 BASIC3.32□□□□□ -1.88
Ddx55Q6ZPL9 Acsm3-201ENSMUST00000063770 2651 ntAPPRIS P1 TSL 1 (best) BASIC3.32□□□□□ -1.88
Ddx55Q6ZPL9 Olfr1293-ps-203ENSMUST00000217845 3628 ntAPPRIS P5 TSL 5 BASIC3.32□□□□□ -1.88
Ddx55Q6ZPL9 Gm25466-201ENSMUST00000103995 132 ntBASIC3.32□□□□□ -1.88
Ddx55Q6ZPL9 Mir467g-201ENSMUST00000116906 120 ntBASIC3.32□□□□□ -1.88
Ddx55Q6ZPL9 Gm13729-201ENSMUST00000120328 406 ntBASIC3.32□□□□□ -1.88
Ddx55Q6ZPL9 Gm12617-201ENSMUST00000121268 381 ntBASIC3.32□□□□□ -1.88
Ddx55Q6ZPL9 Gm24629-201ENSMUST00000122762 89 ntBASIC3.32□□□□□ -1.88
Ddx55Q6ZPL9 Gm27723-201ENSMUST00000157398 63 ntBASIC3.32□□□□□ -1.88
Ddx55Q6ZPL9 Gm22839-201ENSMUST00000158436 304 ntBASIC3.32□□□□□ -1.88
Ddx55Q6ZPL9 Gm23474-201ENSMUST00000158884 75 ntBASIC3.32□□□□□ -1.88
Ddx55Q6ZPL9 Mir5118-201ENSMUST00000175551 67 ntBASIC3.32□□□□□ -1.88
Ddx55Q6ZPL9 Gm20660-201ENSMUST00000177515 289 ntBASIC3.32□□□□□ -1.88
Ddx55Q6ZPL9 Gm30341-201ENSMUST00000194363 289 ntBASIC3.32□□□□□ -1.88
Ddx55Q6ZPL9 Gm44337-201ENSMUST00000196553 114 ntBASIC3.32□□□□□ -1.88
Ddx55Q6ZPL9 Gm9967-203ENSMUST00000206903 408 ntTSL 3 BASIC3.32□□□□□ -1.88
Ddx55Q6ZPL9 AC155715.1-201ENSMUST00000213575 463 ntBASIC3.32□□□□□ -1.88
Ddx55Q6ZPL9 Olfr800-202ENSMUST00000217094 3831 ntAPPRIS P1 TSL 3 BASIC3.32□□□□□ -1.88
Ddx55Q6ZPL9 Mir32-201ENSMUST00000083610 70 ntBASIC3.32□□□□□ -1.88
Ddx55Q6ZPL9 Gm26314-201ENSMUST00000083891 107 ntBASIC3.32□□□□□ -1.88
Ddx55Q6ZPL9 Gm37296-201ENSMUST00000192728 2922 ntBASIC3.32□□□□□ -1.88
Ddx55Q6ZPL9 Olfr1033-205ENSMUST00000218397 3973 ntAPPRIS P1 TSL 5 BASIC3.31□□□□□ -1.88
Ddx55Q6ZPL9 Vmn1r67-202ENSMUST00000226237 2352 ntAPPRIS ALT2 BASIC3.31□□□□□ -1.88
Ddx55Q6ZPL9 Gm15526-201ENSMUST00000112504 204 ntBASIC3.31□□□□□ -1.88
Retrieved 100 of 76,532 protein–RNA pairs in 80 ms