Protein–RNA interactions for Protein: Q6PGB8

Smarca1, Probable global transcription activator SNF2L1, mousemouse

Predictions only

Length 1,046 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smarca1Q6PGB8 Trav14-1-201ENSMUST00000198297 399 ntAPPRIS P1 BASIC2.84□□□□□ -1.95
Smarca1Q6PGB8 Gm43264-201ENSMUST00000202284 325 ntBASIC2.84□□□□□ -1.95
Smarca1Q6PGB8 1700072O05Rik-201ENSMUST00000204672 321 ntTSL 5 BASIC2.84□□□□□ -1.95
Smarca1Q6PGB8 Gm23404-201ENSMUST00000082543 97 ntBASIC2.84□□□□□ -1.95
Smarca1Q6PGB8 Gm26494-201ENSMUST00000083154 143 ntBASIC2.84□□□□□ -1.95
Smarca1Q6PGB8 Gm23453-201ENSMUST00000083326 106 ntBASIC2.84□□□□□ -1.95
Smarca1Q6PGB8 Gm24493-201ENSMUST00000083805 143 ntBASIC2.84□□□□□ -1.95
Smarca1Q6PGB8 Vmn1r67-202ENSMUST00000226237 2352 ntAPPRIS ALT2 BASIC2.84□□□□□ -1.95
Smarca1Q6PGB8 Gm38388-201ENSMUST00000195569 1430 ntBASIC2.84□□□□□ -1.96
Smarca1Q6PGB8 Vmn1r29-204ENSMUST00000228038 4520 ntAPPRIS P1 BASIC2.83□□□□□ -1.96
Smarca1Q6PGB8 Zfp953-201ENSMUST00000081582 4677 ntAPPRIS P1 TSL 1 (best) BASIC2.83□□□□□ -1.96
Smarca1Q6PGB8 Gm6574-201ENSMUST00000120037 362 ntBASIC2.83□□□□□ -1.96
Smarca1Q6PGB8 Gm11834-201ENSMUST00000122257 585 ntBASIC2.83□□□□□ -1.96
Smarca1Q6PGB8 Gm23470-201ENSMUST00000157129 120 ntBASIC2.83□□□□□ -1.96
Smarca1Q6PGB8 Gm7953-201ENSMUST00000168278 469 ntBASIC2.83□□□□□ -1.96
Smarca1Q6PGB8 BC028528-205ENSMUST00000171519 447 ntAPPRIS P3 TSL 1 (best) BASIC2.83□□□□□ -1.96
Smarca1Q6PGB8 4930518C09Rik-201ENSMUST00000172700 478 ntTSL 1 (best) BASIC2.83□□□□□ -1.96
Smarca1Q6PGB8 Mir6405-201ENSMUST00000184584 124 ntBASIC2.83□□□□□ -1.96
Smarca1Q6PGB8 Gm29658-201ENSMUST00000185404 230 ntBASIC2.83□□□□□ -1.96
Smarca1Q6PGB8 Gm28930-201ENSMUST00000189525 437 ntTSL 5 BASIC2.83□□□□□ -1.96
Smarca1Q6PGB8 Gm40810-201ENSMUST00000219149 253 ntBASIC2.83□□□□□ -1.96
Smarca1Q6PGB8 AC160962.2-201ENSMUST00000224761 632 ntBASIC2.83□□□□□ -1.96
Smarca1Q6PGB8 Gm23721-201ENSMUST00000083005 107 ntBASIC2.83□□□□□ -1.96
Smarca1Q6PGB8 Olfr1109-203ENSMUST00000217066 2384 ntAPPRIS P1 TSL 5 BASIC2.83□□□□□ -1.96
Smarca1Q6PGB8 Pak3-210ENSMUST00000172330 8135 ntAPPRIS P3 TSL 1 (best) BASIC2.83□□□□□ -1.96
Smarca1Q6PGB8 Vmn2r72-201ENSMUST00000063425 2571 ntAPPRIS P1 TSL 5 BASIC2.83□□□□□ -1.96
Smarca1Q6PGB8 Olfr420-202ENSMUST00000213748 3806 ntAPPRIS P1 TSL 5 BASIC2.83□□□□□ -1.96
Smarca1Q6PGB8 Gm9218-201ENSMUST00000121068 2694 ntBASIC2.83□□□□□ -1.96
Smarca1Q6PGB8 Gm38071-201ENSMUST00000195792 3378 ntBASIC2.83□□□□□ -1.96
Smarca1Q6PGB8 Gm45557-201ENSMUST00000210004 1651 ntBASIC2.82□□□□□ -1.96
Smarca1Q6PGB8 Gm37063-201ENSMUST00000194678 3520 ntBASIC2.82□□□□□ -1.96
Smarca1Q6PGB8 Mir92-1-201ENSMUST00000102108 80 ntBASIC2.82□□□□□ -1.96
Smarca1Q6PGB8 Snora36b-201ENSMUST00000104383 132 ntBASIC2.82□□□□□ -1.96
Smarca1Q6PGB8 Gm13672-201ENSMUST00000117554 459 ntBASIC2.82□□□□□ -1.96
Smarca1Q6PGB8 Gm11712-201ENSMUST00000129139 367 ntTSL 5 BASIC2.82□□□□□ -1.96
Smarca1Q6PGB8 Gm24075-201ENSMUST00000158175 72 ntBASIC2.82□□□□□ -1.96
Smarca1Q6PGB8 Gm24499-201ENSMUST00000158446 104 ntBASIC2.82□□□□□ -1.96
Smarca1Q6PGB8 Gm22192-201ENSMUST00000175128 85 ntBASIC2.82□□□□□ -1.96
Smarca1Q6PGB8 Gm10717-205ENSMUST00000177601 645 ntAPPRIS ALT2 TSL 5 BASIC2.82□□□□□ -1.96
Smarca1Q6PGB8 Mir6346-201ENSMUST00000183982 81 ntBASIC2.82□□□□□ -1.96
Smarca1Q6PGB8 Ranbp2-ps9-201ENSMUST00000184566 382 ntBASIC2.82□□□□□ -1.96
Smarca1Q6PGB8 Gm28710-201ENSMUST00000186866 489 ntTSL 5 BASIC2.82□□□□□ -1.96
Smarca1Q6PGB8 Gm34302-201ENSMUST00000192926 243 ntAPPRIS P1 TSL 5 BASIC2.82□□□□□ -1.96
Smarca1Q6PGB8 Gm44024-201ENSMUST00000203008 476 ntBASIC2.82□□□□□ -1.96
Smarca1Q6PGB8 AC102369.1-201ENSMUST00000218415 373 ntBASIC2.82□□□□□ -1.96
Smarca1Q6PGB8 AC155241.1-201ENSMUST00000222709 415 ntTSL 5 BASIC2.82□□□□□ -1.96
Smarca1Q6PGB8 Gm25632-201ENSMUST00000083112 85 ntBASIC2.82□□□□□ -1.96
Smarca1Q6PGB8 Gm25896-201ENSMUST00000083713 136 ntBASIC2.82□□□□□ -1.96
Smarca1Q6PGB8 Olfr251-202ENSMUST00000214865 4930 ntAPPRIS ALT2 TSL 5 BASIC2.82□□□□□ -1.96
Smarca1Q6PGB8 Olfr1454-202ENSMUST00000213806 3906 ntAPPRIS P1 TSL 5 BASIC2.82□□□□□ -1.96
Smarca1Q6PGB8 Olfr803-202ENSMUST00000204641 2385 ntAPPRIS P1 TSL 5 BASIC2.81□□□□□ -1.96
Smarca1Q6PGB8 Olfr1370-204ENSMUST00000215806 4322 ntAPPRIS P1 TSL 5 BASIC2.81□□□□□ -1.96
Smarca1Q6PGB8 Gpr174-204ENSMUST00000120971 3588 ntAPPRIS P1 TSL 1 (best) BASIC2.81□□□□□ -1.96
Smarca1Q6PGB8 Traj6-201ENSMUST00000103734 62 ntAPPRIS P1 BASIC2.81□□□□□ -1.96
Smarca1Q6PGB8 Gm24282-201ENSMUST00000104232 66 ntBASIC2.81□□□□□ -1.96
Smarca1Q6PGB8 Gm26342-201ENSMUST00000104557 129 ntBASIC2.81□□□□□ -1.96
Smarca1Q6PGB8 Gm25529-201ENSMUST00000104850 92 ntBASIC2.81□□□□□ -1.96
Smarca1Q6PGB8 Gm24274-201ENSMUST00000116787 124 ntBASIC2.81□□□□□ -1.96
Smarca1Q6PGB8 Rhox11-ps2-201ENSMUST00000117962 451 ntBASIC2.81□□□□□ -1.96
Smarca1Q6PGB8 Gm25982-201ENSMUST00000157920 101 ntBASIC2.81□□□□□ -1.96
Smarca1Q6PGB8 Gm22666-201ENSMUST00000158717 164 ntBASIC2.81□□□□□ -1.96
Smarca1Q6PGB8 Gm42716-203ENSMUST00000197140 259 ntTSL 3 BASIC2.81□□□□□ -1.96
Smarca1Q6PGB8 Tnfrsf23-203ENSMUST00000208017 544 ntTSL 3 BASIC2.81□□□□□ -1.96
Smarca1Q6PGB8 Gm45879-201ENSMUST00000212521 392 ntBASIC2.81□□□□□ -1.96
Smarca1Q6PGB8 AC192333.1-201ENSMUST00000224573 376 ntBASIC2.81□□□□□ -1.96
Smarca1Q6PGB8 AC125311.1-201ENSMUST00000226950 220 ntBASIC2.81□□□□□ -1.96
Smarca1Q6PGB8 Olfr1009-201ENSMUST00000055517 945 ntAPPRIS P1 BASIC2.81□□□□□ -1.96
Smarca1Q6PGB8 Gm25651-201ENSMUST00000083782 119 ntBASIC2.81□□□□□ -1.96
Smarca1Q6PGB8 Tlr3-201ENSMUST00000034056 4407 ntAPPRIS P1 TSL 1 (best) BASIC2.81□□□□□ -1.96
Smarca1Q6PGB8 Olfr1218-203ENSMUST00000215048 3900 ntAPPRIS P1 TSL 5 BASIC2.8□□□□□ -1.96
Smarca1Q6PGB8 2310075C17Rik-201ENSMUST00000161216 326 ntTSL 1 (best) BASIC2.8□□□□□ -1.96
Smarca1Q6PGB8 Gm16004-201ENSMUST00000161981 311 ntTSL 5 BASIC2.8□□□□□ -1.96
Smarca1Q6PGB8 Gm20462-201ENSMUST00000172623 408 ntBASIC2.8□□□□□ -1.96
Smarca1Q6PGB8 Gm23793-201ENSMUST00000179396 117 ntBASIC2.8□□□□□ -1.96
Smarca1Q6PGB8 1700063A18Rik-201ENSMUST00000190901 356 ntTSL 1 (best) BASIC2.8□□□□□ -1.96
Smarca1Q6PGB8 Gm37754-201ENSMUST00000194406 452 ntTSL 5 BASIC2.8□□□□□ -1.96
Smarca1Q6PGB8 Gm37664-201ENSMUST00000194607 3813 ntBASIC2.8□□□□□ -1.96
Smarca1Q6PGB8 Gm42570-201ENSMUST00000195937 292 ntBASIC2.8□□□□□ -1.96
Smarca1Q6PGB8 Gm43669-201ENSMUST00000198229 436 ntBASIC2.8□□□□□ -1.96
Smarca1Q6PGB8 AC154472.1-201ENSMUST00000222663 236 ntTSL 3 BASIC2.8□□□□□ -1.96
Smarca1Q6PGB8 Gm24765-201ENSMUST00000083691 103 ntBASIC2.8□□□□□ -1.96
Smarca1Q6PGB8 Gm1980-201ENSMUST00000123131 2306 ntBASIC2.79□□□□□ -1.96
Smarca1Q6PGB8 Gm14980-201ENSMUST00000121247 736 ntBASIC2.79□□□□□ -1.96
Smarca1Q6PGB8 Gm24005-201ENSMUST00000158459 296 ntBASIC2.79□□□□□ -1.96
Smarca1Q6PGB8 Gm25642-201ENSMUST00000175137 66 ntBASIC2.79□□□□□ -1.96
Smarca1Q6PGB8 Gm21978-201ENSMUST00000179696 377 ntBASIC2.79□□□□□ -1.96
Smarca1Q6PGB8 Mir6355-201ENSMUST00000183687 106 ntBASIC2.79□□□□□ -1.96
Smarca1Q6PGB8 Gm29235-201ENSMUST00000185786 442 ntTSL 5 BASIC2.79□□□□□ -1.96
Smarca1Q6PGB8 Gm43626-201ENSMUST00000198575 162 ntBASIC2.79□□□□□ -1.96
Smarca1Q6PGB8 Nbdy-205ENSMUST00000208235 132 ntAPPRIS P2 TSL 2 BASIC2.79□□□□□ -1.96
Smarca1Q6PGB8 Gm35101-201ENSMUST00000219218 243 ntTSL 5 BASIC2.79□□□□□ -1.96
Smarca1Q6PGB8 Gm19118-201ENSMUST00000222554 98 ntBASIC2.79□□□□□ -1.96
Smarca1Q6PGB8 Prl-203ENSMUST00000224228 888 ntAPPRIS ALT2 BASIC2.79□□□□□ -1.96
Smarca1Q6PGB8 Mir29b-2-201ENSMUST00000083478 81 ntBASIC2.79□□□□□ -1.96
Smarca1Q6PGB8 Ifi209-201ENSMUST00000056071 3439 ntAPPRIS P1 TSL 1 (best) BASIC2.79□□□□□ -1.96
Smarca1Q6PGB8 Olfr1229-202ENSMUST00000213883 3594 ntAPPRIS P1 TSL 5 BASIC2.78□□□□□ -1.96
Smarca1Q6PGB8 Mir542-201ENSMUST00000102186 85 ntBASIC2.78□□□□□ -1.96
Smarca1Q6PGB8 Gm25485-201ENSMUST00000104120 132 ntBASIC2.78□□□□□ -1.96
Smarca1Q6PGB8 Gm23803-201ENSMUST00000104610 132 ntBASIC2.78□□□□□ -1.96
Smarca1Q6PGB8 Gm11060-201ENSMUST00000111107 72 ntAPPRIS P1 TSL 5 BASIC2.78□□□□□ -1.96
Retrieved 100 of 76,532 protein–RNA pairs in 96 ms