Protein–RNA interactions for Protein: Q6PFD9

Nup98, Nuclear pore complex protein Nup98-Nup96, mousemouse

Known RBP Predictions only

Length 1,816 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nup98Q6PFD9 Gm46103-201ENSMUST00000217614 341 ntBASIC0.71□□□□□ -2.3
Nup98Q6PFD9 AL645546.2-201ENSMUST00000224526 265 ntBASIC0.71□□□□□ -2.3
Nup98Q6PFD9 Snord35a-201ENSMUST00000083884 90 ntBASIC0.71□□□□□ -2.3
Nup98Q6PFD9 Gm14530-201ENSMUST00000122391 333 ntBASIC0.7□□□□□ -2.3
Nup98Q6PFD9 Vmn1r-ps69-201ENSMUST00000172759 201 ntBASIC0.7□□□□□ -2.3
Nup98Q6PFD9 Gm38006-201ENSMUST00000192421 697 ntTSL 5 BASIC0.7□□□□□ -2.3
Nup98Q6PFD9 Gm44128-201ENSMUST00000204909 219 ntBASIC0.7□□□□□ -2.3
Nup98Q6PFD9 Gm43944-201ENSMUST00000205220 120 ntBASIC0.7□□□□□ -2.3
Nup98Q6PFD9 AC125464.1-201ENSMUST00000228013 512 ntBASIC0.7□□□□□ -2.3
Nup98Q6PFD9 Cysltr1-201ENSMUST00000064892 1059 ntAPPRIS P1 TSL 2 BASIC0.7□□□□□ -2.3
Nup98Q6PFD9 Gm26265-201ENSMUST00000083277 135 ntBASIC0.7□□□□□ -2.3
Nup98Q6PFD9 Gm26166-201ENSMUST00000083788 107 ntBASIC0.7□□□□□ -2.3
Nup98Q6PFD9 Gm25008-201ENSMUST00000083809 81 ntBASIC0.7□□□□□ -2.3
Nup98Q6PFD9 Defb41-201ENSMUST00000088463 467 ntTSL 1 (best) BASIC0.7□□□□□ -2.3
Nup98Q6PFD9 Gm22496-201ENSMUST00000104493 88 ntBASIC0.69□□□□□ -2.3
Nup98Q6PFD9 Gm13087-201ENSMUST00000118298 256 ntBASIC0.69□□□□□ -2.3
Nup98Q6PFD9 Gm14915-201ENSMUST00000120747 204 ntBASIC0.69□□□□□ -2.3
Nup98Q6PFD9 Gm22075-201ENSMUST00000158599 192 ntBASIC0.69□□□□□ -2.3
Nup98Q6PFD9 Gm25175-201ENSMUST00000178712 79 ntBASIC0.69□□□□□ -2.3
Nup98Q6PFD9 Mir6370-201ENSMUST00000183510 120 ntBASIC0.69□□□□□ -2.3
Nup98Q6PFD9 Gm45556-201ENSMUST00000210689 345 ntTSL 5 BASIC0.69□□□□□ -2.3
Nup98Q6PFD9 Gm22091-201ENSMUST00000116908 127 ntBASIC0.68□□□□□ -2.3
Nup98Q6PFD9 Gm6664-201ENSMUST00000119138 468 ntBASIC0.68□□□□□ -2.3
Nup98Q6PFD9 Gm12044-201ENSMUST00000120335 213 ntBASIC0.68□□□□□ -2.3
Nup98Q6PFD9 Gm6025-201ENSMUST00000121517 201 ntBASIC0.68□□□□□ -2.3
Nup98Q6PFD9 Gm20477-201ENSMUST00000174028 280 ntBASIC0.68□□□□□ -2.3
Nup98Q6PFD9 Olfr454-ps1-201ENSMUST00000205206 348 ntBASIC0.68□□□□□ -2.3
Nup98Q6PFD9 AC122901.2-201ENSMUST00000216926 285 ntBASIC0.68□□□□□ -2.3
Nup98Q6PFD9 Gm31849-201ENSMUST00000220306 375 ntBASIC0.68□□□□□ -2.3
Nup98Q6PFD9 AC102352.1-201ENSMUST00000224187 582 ntBASIC0.68□□□□□ -2.3
Nup98Q6PFD9 Gm10770-201ENSMUST00000099418 714 ntAPPRIS P1 TSL 5 BASIC0.68□□□□□ -2.3
Nup98Q6PFD9 Gm13885-201ENSMUST00000117569 187 ntBASIC0.68□□□□□ -2.3
Nup98Q6PFD9 Rhox11-ps2-201ENSMUST00000117962 451 ntBASIC0.68□□□□□ -2.3
Nup98Q6PFD9 Gm14852-201ENSMUST00000120065 647 ntBASIC0.68□□□□□ -2.3
Nup98Q6PFD9 Gm14600-201ENSMUST00000121032 630 ntBASIC0.68□□□□□ -2.3
Nup98Q6PFD9 Gm13860-201ENSMUST00000125185 452 ntTSL 3 BASIC0.68□□□□□ -2.3
Nup98Q6PFD9 Vmn2r-ps111-201ENSMUST00000161565 241 ntTSL 2 BASIC0.68□□□□□ -2.3
Nup98Q6PFD9 Gm21978-201ENSMUST00000179696 377 ntBASIC0.68□□□□□ -2.3
Nup98Q6PFD9 Scgb2b17-202ENSMUST00000182640 420 ntAPPRIS ALT2 TSL 3 BASIC0.68□□□□□ -2.3
Nup98Q6PFD9 4930596I21Rik-201ENSMUST00000200494 461 ntTSL 1 (best) BASIC0.68□□□□□ -2.3
Nup98Q6PFD9 Gm18854-201ENSMUST00000211196 329 ntBASIC0.68□□□□□ -2.3
Nup98Q6PFD9 AC126939.3-201ENSMUST00000226061 166 ntBASIC0.68□□□□□ -2.3
Nup98Q6PFD9 Gm10092-201ENSMUST00000077110 180 ntBASIC0.68□□□□□ -2.3
Nup98Q6PFD9 Gm22611-201ENSMUST00000158288 150 ntBASIC0.67□□□□□ -2.3
Nup98Q6PFD9 Hmgb3-ps-201ENSMUST00000162465 601 ntBASIC0.67□□□□□ -2.3
Nup98Q6PFD9 Gm27861-201ENSMUST00000183920 214 ntBASIC0.67□□□□□ -2.3
Nup98Q6PFD9 Gm29460-201ENSMUST00000188607 714 ntBASIC0.67□□□□□ -2.3
Nup98Q6PFD9 Gm45366-201ENSMUST00000209828 384 ntBASIC0.67□□□□□ -2.3
Nup98Q6PFD9 AC122225.1-201ENSMUST00000215641 369 ntBASIC0.67□□□□□ -2.3
Nup98Q6PFD9 CT030184.1-201ENSMUST00000222393 416 ntBASIC0.67□□□□□ -2.3
Nup98Q6PFD9 AC133654.1-201ENSMUST00000228411 672 ntBASIC0.67□□□□□ -2.3
Nup98Q6PFD9 mt-Co2-201ENSMUST00000082405 684 ntAPPRIS P1 BASIC0.67□□□□□ -2.3
Nup98Q6PFD9 Gm14914-201ENSMUST00000117576 2031 ntBASIC0.67□□□□□ -2.3
Nup98Q6PFD9 Gm22678-201ENSMUST00000116974 101 ntBASIC0.66□□□□□ -2.3
Nup98Q6PFD9 Gm23587-201ENSMUST00000157658 84 ntBASIC0.66□□□□□ -2.3
Nup98Q6PFD9 Gm26236-201ENSMUST00000175536 137 ntBASIC0.66□□□□□ -2.3
Nup98Q6PFD9 Gm26365-201ENSMUST00000179177 94 ntBASIC0.66□□□□□ -2.3
Nup98Q6PFD9 Gm45387-201ENSMUST00000209792 632 ntBASIC0.66□□□□□ -2.3
Nup98Q6PFD9 Gm18039-201ENSMUST00000217816 728 ntBASIC0.66□□□□□ -2.3
Nup98Q6PFD9 CT010449.1-201ENSMUST00000220624 153 ntBASIC0.66□□□□□ -2.3
Nup98Q6PFD9 CT025689.3-201ENSMUST00000223817 301 ntBASIC0.66□□□□□ -2.3
Nup98Q6PFD9 Gm13672-201ENSMUST00000117554 459 ntBASIC0.66□□□□□ -2.3
Nup98Q6PFD9 Gm12656-201ENSMUST00000118149 577 ntBASIC0.66□□□□□ -2.3
Nup98Q6PFD9 Gm22452-201ENSMUST00000122804 104 ntBASIC0.66□□□□□ -2.3
Nup98Q6PFD9 Nell1os-201ENSMUST00000134584 489 ntTSL 1 (best) BASIC0.66□□□□□ -2.3
Nup98Q6PFD9 Gm23170-201ENSMUST00000157158 106 ntBASIC0.66□□□□□ -2.3
Nup98Q6PFD9 Gm26213-201ENSMUST00000158582 110 ntBASIC0.66□□□□□ -2.3
Nup98Q6PFD9 4930486I03Rik-201ENSMUST00000161509 788 ntTSL 1 (best) BASIC0.66□□□□□ -2.3
Nup98Q6PFD9 Rpl23a-ps12-201ENSMUST00000179178 468 ntBASIC0.66□□□□□ -2.3
Nup98Q6PFD9 Gm21758-201ENSMUST00000179336 819 ntBASIC0.66□□□□□ -2.3
Nup98Q6PFD9 Gm24264-201ENSMUST00000179835 94 ntBASIC0.66□□□□□ -2.3
Nup98Q6PFD9 Gm24969-201ENSMUST00000180331 79 ntBASIC0.66□□□□□ -2.3
Nup98Q6PFD9 Gm29647-201ENSMUST00000188795 666 ntBASIC0.66□□□□□ -2.3
Nup98Q6PFD9 Gm20832-201ENSMUST00000189076 665 ntBASIC0.66□□□□□ -2.3
Nup98Q6PFD9 B230110G15Rik-201ENSMUST00000190868 772 ntTSL 1 (best) BASIC0.66□□□□□ -2.3
Nup98Q6PFD9 Gm28241-201ENSMUST00000190916 235 ntBASIC0.66□□□□□ -2.3
Nup98Q6PFD9 Gm28504-201ENSMUST00000190977 666 ntBASIC0.66□□□□□ -2.3
Nup98Q6PFD9 Gm35843-201ENSMUST00000193716 666 ntBASIC0.66□□□□□ -2.3
Nup98Q6PFD9 Gm36728-201ENSMUST00000195782 665 ntBASIC0.66□□□□□ -2.3
Nup98Q6PFD9 Mir3068-202ENSMUST00000197755 79 ntBASIC0.66□□□□□ -2.3
Nup98Q6PFD9 AC100590.3-201ENSMUST00000219355 332 ntTSL 5 BASIC0.66□□□□□ -2.3
Nup98Q6PFD9 Gm22515-201ENSMUST00000158273 305 ntBASIC0.65□□□□□ -2.31
Nup98Q6PFD9 Gm22074-201ENSMUST00000158595 113 ntBASIC0.65□□□□□ -2.31
Nup98Q6PFD9 Gm10267-202ENSMUST00000181652 341 ntAPPRIS P2 TSL 5 BASIC0.65□□□□□ -2.31
Nup98Q6PFD9 Gm38039-201ENSMUST00000195328 443 ntTSL 5 BASIC0.65□□□□□ -2.31
Nup98Q6PFD9 Gm29754-201ENSMUST00000206269 358 ntBASIC0.65□□□□□ -2.31
Nup98Q6PFD9 Mir224-201ENSMUST00000083608 82 ntBASIC0.65□□□□□ -2.31
Nup98Q6PFD9 Gm23733-201ENSMUST00000083750 106 ntBASIC0.65□□□□□ -2.31
Nup98Q6PFD9 Gm23691-201ENSMUST00000101878 107 ntBASIC0.64□□□□□ -2.31
Nup98Q6PFD9 Trbj1-4-201ENSMUST00000103287 51 ntAPPRIS P1 BASIC0.64□□□□□ -2.31
Nup98Q6PFD9 Gm15193-201ENSMUST00000120224 865 ntBASIC0.64□□□□□ -2.31
Nup98Q6PFD9 Gm15861-201ENSMUST00000120979 339 ntBASIC0.64□□□□□ -2.31
Nup98Q6PFD9 Gm22447-201ENSMUST00000158155 92 ntBASIC0.64□□□□□ -2.31
Nup98Q6PFD9 Smim9-203ENSMUST00000165080 414 ntAPPRIS P1 TSL 3 BASIC0.64□□□□□ -2.31
Nup98Q6PFD9 Gm21726-201ENSMUST00000179654 392 ntBASIC0.64□□□□□ -2.31
Nup98Q6PFD9 Mir6389-201ENSMUST00000183661 102 ntBASIC0.64□□□□□ -2.31
Nup98Q6PFD9 AC154552.5-201ENSMUST00000222352 207 ntBASIC0.64□□□□□ -2.31
Nup98Q6PFD9 Tas2r131-201ENSMUST00000082085 1036 ntAPPRIS P1 BASIC0.64□□□□□ -2.31
Nup98Q6PFD9 Mir101a-201ENSMUST00000083517 83 ntBASIC0.64□□□□□ -2.31
Nup98Q6PFD9 Mir196a-2-201ENSMUST00000083554 85 ntBASIC0.64□□□□□ -2.31
Retrieved 100 of 76,532 protein–RNA pairs in 90.8 ms