Protein–RNA interactions for Protein: Q6PDX6

Rnf220, E3 ubiquitin-protein ligase Rnf220, mousemouse

Predictions only

Length 566 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rnf220Q6PDX6 Tfpi-203ENSMUST00000111711 3968 ntTSL 5 BASIC3.07□□□□□ -1.92
Rnf220Q6PDX6 Cp-201ENSMUST00000003714 4092 ntAPPRIS ALT2 TSL 1 (best) BASIC3.07□□□□□ -1.92
Rnf220Q6PDX6 Vmn1r178-205ENSMUST00000227993 2518 ntAPPRIS P1 BASIC3.07□□□□□ -1.92
Rnf220Q6PDX6 Hif1a-202ENSMUST00000110461 4385 ntAPPRIS ALT2 TSL 1 (best) BASIC3.06□□□□□ -1.92
Rnf220Q6PDX6 Gm22713-201ENSMUST00000116895 130 ntBASIC3.06□□□□□ -1.92
Rnf220Q6PDX6 Gm15215-201ENSMUST00000117773 489 ntBASIC3.06□□□□□ -1.92
Rnf220Q6PDX6 Gm22027-201ENSMUST00000122737 127 ntBASIC3.06□□□□□ -1.92
Rnf220Q6PDX6 Gm26277-201ENSMUST00000157097 152 ntBASIC3.06□□□□□ -1.92
Rnf220Q6PDX6 Gm22034-201ENSMUST00000157283 134 ntBASIC3.06□□□□□ -1.92
Rnf220Q6PDX6 Gm27761-201ENSMUST00000184091 131 ntBASIC3.06□□□□□ -1.92
Rnf220Q6PDX6 Gtpbp4-ps4-201ENSMUST00000184813 258 ntBASIC3.06□□□□□ -1.92
Rnf220Q6PDX6 Gm44024-201ENSMUST00000203008 476 ntBASIC3.06□□□□□ -1.92
Rnf220Q6PDX6 Olfr1111-202ENSMUST00000214492 1616 ntAPPRIS P1 TSL 5 BASIC3.06□□□□□ -1.92
Rnf220Q6PDX6 AC122418.1-201ENSMUST00000225012 511 ntBASIC3.06□□□□□ -1.92
Rnf220Q6PDX6 AC115735.2-201ENSMUST00000227135 351 ntBASIC3.06□□□□□ -1.92
Rnf220Q6PDX6 Gm26265-201ENSMUST00000083277 135 ntBASIC3.06□□□□□ -1.92
Rnf220Q6PDX6 Gm10509-201ENSMUST00000097384 259 ntAPPRIS P1 BASIC3.06□□□□□ -1.92
Rnf220Q6PDX6 Gm38162-201ENSMUST00000195562 4597 ntBASIC3.06□□□□□ -1.92
Rnf220Q6PDX6 Olfr166-202ENSMUST00000213531 4205 ntAPPRIS P1 TSL 5 BASIC3.06□□□□□ -1.92
Rnf220Q6PDX6 Wac-217ENSMUST00000172018 1965 ntTSL 5 BASIC3.05□□□□□ -1.92
Rnf220Q6PDX6 Olfr1148-202ENSMUST00000215230 3095 ntAPPRIS P1 TSL 5 BASIC3.05□□□□□ -1.92
Rnf220Q6PDX6 Gm22758-201ENSMUST00000102275 96 ntBASIC3.05□□□□□ -1.92
Rnf220Q6PDX6 Trav7-2-201ENSMUST00000103636 336 ntAPPRIS P1 BASIC3.05□□□□□ -1.92
Rnf220Q6PDX6 Gm26249-201ENSMUST00000116708 118 ntBASIC3.05□□□□□ -1.92
Rnf220Q6PDX6 Gm12722-201ENSMUST00000118507 493 ntBASIC3.05□□□□□ -1.92
Rnf220Q6PDX6 Gm15365-201ENSMUST00000122392 300 ntBASIC3.05□□□□□ -1.92
Rnf220Q6PDX6 Gm22310-201ENSMUST00000157509 116 ntBASIC3.05□□□□□ -1.92
Rnf220Q6PDX6 Gm23540-201ENSMUST00000157543 164 ntBASIC3.05□□□□□ -1.92
Rnf220Q6PDX6 Gm26186-201ENSMUST00000157689 125 ntBASIC3.05□□□□□ -1.92
Rnf220Q6PDX6 Gm22118-201ENSMUST00000175593 171 ntBASIC3.05□□□□□ -1.92
Rnf220Q6PDX6 Gm29597-201ENSMUST00000188035 308 ntBASIC3.05□□□□□ -1.92
Rnf220Q6PDX6 Gm37089-201ENSMUST00000195616 129 ntBASIC3.05□□□□□ -1.92
Rnf220Q6PDX6 Mir465d-201ENSMUST00000196314 58 ntBASIC3.05□□□□□ -1.92
Rnf220Q6PDX6 Trav7d-2-201ENSMUST00000200127 337 ntAPPRIS P1 BASIC3.05□□□□□ -1.92
Rnf220Q6PDX6 Olfr511-ps1-201ENSMUST00000207188 217 ntBASIC3.05□□□□□ -1.92
Rnf220Q6PDX6 Gm2059-201ENSMUST00000212025 287 ntBASIC3.05□□□□□ -1.92
Rnf220Q6PDX6 AC153979.1-201ENSMUST00000219684 242 ntTSL 5 BASIC3.05□□□□□ -1.92
Rnf220Q6PDX6 Gm4036-201ENSMUST00000220842 626 ntBASIC3.05□□□□□ -1.92
Rnf220Q6PDX6 Gm45104-201ENSMUST00000208748 4350 ntBASIC3.05□□□□□ -1.92
Rnf220Q6PDX6 Olfr1270-204ENSMUST00000215975 4854 ntAPPRIS P1 TSL 5 BASIC3.05□□□□□ -1.92
Rnf220Q6PDX6 Olfr397-204ENSMUST00000216291 4168 ntAPPRIS P1 TSL 5 BASIC3.04□□□□□ -1.92
Rnf220Q6PDX6 Vmn1r46-206ENSMUST00000228401 10955 ntAPPRIS P1 BASIC3.04□□□□□ -1.92
Rnf220Q6PDX6 Vmn1r219-204ENSMUST00000228113 5639 ntAPPRIS P1 BASIC3.04□□□□□ -1.92
Rnf220Q6PDX6 Olfr1402-202ENSMUST00000199297 4051 ntAPPRIS P1 TSL 5 BASIC3.04□□□□□ -1.92
Rnf220Q6PDX6 Ighv16-1-201ENSMUST00000103470 299 ntAPPRIS P1 BASIC3.04□□□□□ -1.92
Rnf220Q6PDX6 Gm23013-201ENSMUST00000104146 106 ntBASIC3.04□□□□□ -1.92
Rnf220Q6PDX6 Gm6954-201ENSMUST00000117416 225 ntBASIC3.04□□□□□ -1.92
Rnf220Q6PDX6 Gm13504-201ENSMUST00000117490 316 ntBASIC3.04□□□□□ -1.92
Rnf220Q6PDX6 Gm14971-201ENSMUST00000117980 663 ntBASIC3.04□□□□□ -1.92
Rnf220Q6PDX6 Gm14215-201ENSMUST00000120578 221 ntBASIC3.04□□□□□ -1.92
Rnf220Q6PDX6 Gm15461-201ENSMUST00000143488 235 ntTSL 3 BASIC3.04□□□□□ -1.92
Rnf220Q6PDX6 Gm22537-201ENSMUST00000158172 199 ntBASIC3.04□□□□□ -1.92
Rnf220Q6PDX6 Gm25012-201ENSMUST00000158396 164 ntBASIC3.04□□□□□ -1.92
Rnf220Q6PDX6 B230216N24Rik-202ENSMUST00000159353 345 ntTSL 1 (best) BASIC3.04□□□□□ -1.92
Rnf220Q6PDX6 Gm27271-201ENSMUST00000183509 170 ntBASIC3.04□□□□□ -1.92
Rnf220Q6PDX6 Mir6405-201ENSMUST00000184584 124 ntBASIC3.04□□□□□ -1.92
Rnf220Q6PDX6 Gm27540-201ENSMUST00000184950 187 ntBASIC3.04□□□□□ -1.92
Rnf220Q6PDX6 Gm29139-201ENSMUST00000185794 248 ntTSL 1 (best) BASIC3.04□□□□□ -1.92
Rnf220Q6PDX6 Gm37617-201ENSMUST00000194309 159 ntBASIC3.04□□□□□ -1.92
Rnf220Q6PDX6 Vmn2r-ps50-201ENSMUST00000209317 120 ntBASIC3.04□□□□□ -1.92
Rnf220Q6PDX6 Olfr6-204ENSMUST00000219365 951 ntAPPRIS P1 BASIC3.04□□□□□ -1.92
Rnf220Q6PDX6 AC159632.1-201ENSMUST00000221808 317 ntTSL 1 (best) BASIC3.04□□□□□ -1.92
Rnf220Q6PDX6 AC123709.1-201ENSMUST00000224848 345 ntBASIC3.04□□□□□ -1.92
Rnf220Q6PDX6 AC108416.2-201ENSMUST00000226792 367 ntBASIC3.04□□□□□ -1.92
Rnf220Q6PDX6 Ranbp2-201ENSMUST00000003310 9608 ntAPPRIS P1 TSL 5 BASIC3.04□□□□□ -1.92
Rnf220Q6PDX6 Tug1-201ENSMUST00000132077 6719 ntTSL 1 (best) BASIC3.04□□□□□ -1.92
Rnf220Q6PDX6 Tlr7-203ENSMUST00000112164 3468 ntAPPRIS P1 TSL 1 (best) BASIC3.03□□□□□ -1.92
Rnf220Q6PDX6 AC124561.2-201ENSMUST00000226657 1973 ntBASIC3.03□□□□□ -1.92
Rnf220Q6PDX6 Olfr136-204ENSMUST00000214035 1925 ntAPPRIS P1 TSL 5 BASIC3.03□□□□□ -1.92
Rnf220Q6PDX6 Vmn2r37-201ENSMUST00000072787 3081 ntAPPRIS P1 TSL 1 (best) BASIC3.03□□□□□ -1.92
Rnf220Q6PDX6 AI504432-201ENSMUST00000070085 5569 ntTSL 1 (best) BASIC3.03□□□□□ -1.92
Rnf220Q6PDX6 Gm22321-201ENSMUST00000157152 104 ntBASIC3.03□□□□□ -1.92
Rnf220Q6PDX6 Gm26099-201ENSMUST00000157248 109 ntBASIC3.03□□□□□ -1.92
Rnf220Q6PDX6 Gm25470-201ENSMUST00000175576 111 ntBASIC3.03□□□□□ -1.92
Rnf220Q6PDX6 Gm26928-201ENSMUST00000182674 572 ntBASIC3.03□□□□□ -1.92
Rnf220Q6PDX6 Gm42621-201ENSMUST00000198114 275 ntBASIC3.03□□□□□ -1.92
Rnf220Q6PDX6 AC141895.1-201ENSMUST00000218141 273 ntBASIC3.03□□□□□ -1.92
Rnf220Q6PDX6 AC114010.1-201ENSMUST00000222060 379 ntBASIC3.03□□□□□ -1.92
Rnf220Q6PDX6 Gm5899-201ENSMUST00000071770 270 ntBASIC3.03□□□□□ -1.92
Rnf220Q6PDX6 Gm25930-201ENSMUST00000082785 107 ntBASIC3.03□□□□□ -1.92
Rnf220Q6PDX6 Mir346-201ENSMUST00000083547 98 ntBASIC3.03□□□□□ -1.92
Rnf220Q6PDX6 Olfr1256-204ENSMUST00000215613 4543 ntAPPRIS P1 TSL 3 BASIC3.03□□□□□ -1.92
Rnf220Q6PDX6 Olfr124-203ENSMUST00000216478 4416 ntAPPRIS P1 TSL 5 BASIC3.03□□□□□ -1.92
Rnf220Q6PDX6 Gm45884-201ENSMUST00000209540 3416 ntBASIC3.03□□□□□ -1.92
Rnf220Q6PDX6 Olfr857-203ENSMUST00000217450 2271 ntTSL 3 BASIC3.03□□□□□ -1.92
Rnf220Q6PDX6 Olfr498-201ENSMUST00000217616 2260 ntAPPRIS P1 BASIC3.03□□□□□ -1.92
Rnf220Q6PDX6 Gm12580-201ENSMUST00000127456 1751 ntTSL 1 (best) BASIC3.02□□□□□ -1.93
Rnf220Q6PDX6 Gm12351-201ENSMUST00000118727 292 ntBASIC3.02□□□□□ -1.93
Rnf220Q6PDX6 Gm22215-201ENSMUST00000157558 96 ntBASIC3.02□□□□□ -1.93
Rnf220Q6PDX6 Gm22800-201ENSMUST00000175627 94 ntBASIC3.02□□□□□ -1.93
Rnf220Q6PDX6 Gm17067-202ENSMUST00000180131 123 ntBASIC3.02□□□□□ -1.93
Rnf220Q6PDX6 Gm27392-201ENSMUST00000185041 101 ntBASIC3.02□□□□□ -1.93
Rnf220Q6PDX6 Gm28959-201ENSMUST00000186713 551 ntTSL 5 BASIC3.02□□□□□ -1.93
Rnf220Q6PDX6 Gm44600-201ENSMUST00000208540 111 ntBASIC3.02□□□□□ -1.93
Rnf220Q6PDX6 AC153564.2-201ENSMUST00000219464 273 ntBASIC3.02□□□□□ -1.93
Rnf220Q6PDX6 AC122834.1-201ENSMUST00000227182 425 ntBASIC3.02□□□□□ -1.93
Rnf220Q6PDX6 Tfpi-204ENSMUST00000111714 3614 ntTSL 1 (best) BASIC3.02□□□□□ -1.93
Rnf220Q6PDX6 Olfr652-202ENSMUST00000215410 4672 ntAPPRIS P1 TSL 5 BASIC3.02□□□□□ -1.93
Rnf220Q6PDX6 Olfr606-202ENSMUST00000214631 2649 ntAPPRIS P1 TSL 5 BASIC3.02□□□□□ -1.93
Rnf220Q6PDX6 Olfr1309-202ENSMUST00000214537 4274 ntAPPRIS P1 TSL 5 BASIC3.02□□□□□ -1.93
Retrieved 100 of 76,532 protein–RNA pairs in 116.8 ms