Protein–RNA interactions for Protein: Q63870

Col7a1, Collagen alpha-1(VII) chain, mousemouse

Predictions only

Length 2,944 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col7a1Q63870 Gm24959-201ENSMUST00000157924 146 ntBASIC0.08□□□□□ -2.4
Col7a1Q63870 Gm23897-201ENSMUST00000158110 158 ntBASIC0.08□□□□□ -2.4
Col7a1Q63870 Gm24333-201ENSMUST00000175101 84 ntBASIC0.08□□□□□ -2.4
Col7a1Q63870 1700063H06Rik-201ENSMUST00000183678 445 ntTSL 1 (best) BASIC0.08□□□□□ -2.4
Col7a1Q63870 Gm37650-201ENSMUST00000193570 248 ntTSL 1 (best) BASIC0.08□□□□□ -2.4
Col7a1Q63870 4930590L20Rik-201ENSMUST00000193820 553 ntTSL 1 (best) BASIC0.08□□□□□ -2.4
Col7a1Q63870 Olfr152-201ENSMUST00000090709 951 ntAPPRIS P2 BASIC0.08□□□□□ -2.4
Col7a1Q63870 AW112010-201ENSMUST00000099676 770 ntTSL 1 (best) BASIC0.08□□□□□ -2.4
Col7a1Q63870 Traj11-201ENSMUST00000103730 59 ntAPPRIS P1 BASIC0.07□□□□□ -2.4
Col7a1Q63870 Mir544-201ENSMUST00000103813 78 ntBASIC0.07□□□□□ -2.4
Col7a1Q63870 Gm24588-201ENSMUST00000116696 83 ntBASIC0.07□□□□□ -2.4
Col7a1Q63870 Gm15381-201ENSMUST00000121501 1156 ntBASIC0.07□□□□□ -2.4
Col7a1Q63870 Gm13860-201ENSMUST00000125185 452 ntTSL 3 BASIC0.07□□□□□ -2.4
Col7a1Q63870 Gm23415-201ENSMUST00000175519 83 ntBASIC0.07□□□□□ -2.4
Col7a1Q63870 AC158597.1-201ENSMUST00000216234 150 ntBASIC0.07□□□□□ -2.4
Col7a1Q63870 AC155314.1-201ENSMUST00000227624 508 ntBASIC0.07□□□□□ -2.4
Col7a1Q63870 Gm382-201ENSMUST00000096332 4070 ntAPPRIS P1 TSL 1 (best) BASIC0.07□□□□□ -2.4
Col7a1Q63870 Gm44708-201ENSMUST00000205580 2237 ntBASIC0.07□□□□□ -2.4
Col7a1Q63870 Gm22785-201ENSMUST00000104087 132 ntBASIC0.07□□□□□ -2.4
Col7a1Q63870 Gm12449-201ENSMUST00000117572 234 ntBASIC0.07□□□□□ -2.4
Col7a1Q63870 Gm24837-201ENSMUST00000158683 81 ntBASIC0.07□□□□□ -2.4
Col7a1Q63870 Mir3086-201ENSMUST00000175072 87 ntBASIC0.07□□□□□ -2.4
Col7a1Q63870 Gtpbp4-ps2-201ENSMUST00000184058 256 ntBASIC0.07□□□□□ -2.4
Col7a1Q63870 Gm37418-201ENSMUST00000195031 274 ntBASIC0.07□□□□□ -2.4
Col7a1Q63870 AC113031.5-201ENSMUST00000227116 606 ntBASIC0.07□□□□□ -2.4
Col7a1Q63870 Olfr1489-201ENSMUST00000053113 1111 ntAPPRIS P1 BASIC0.07□□□□□ -2.4
Col7a1Q63870 Gm22299-201ENSMUST00000082663 136 ntBASIC0.07□□□□□ -2.4
Col7a1Q63870 Gm24919-201ENSMUST00000083020 106 ntBASIC0.07□□□□□ -2.4
Col7a1Q63870 Gm24927-201ENSMUST00000083397 107 ntBASIC0.07□□□□□ -2.4
Col7a1Q63870 Mir411-201ENSMUST00000083543 82 ntBASIC0.07□□□□□ -2.4
Col7a1Q63870 Defb41-201ENSMUST00000088463 467 ntTSL 1 (best) BASIC0.07□□□□□ -2.4
Col7a1Q63870 Gm15084-201ENSMUST00000178585 1502 ntBASIC0.07□□□□□ -2.4
Col7a1Q63870 Gm26147-201ENSMUST00000104479 114 ntBASIC0.07□□□□□ -2.4
Col7a1Q63870 Gm17132-201ENSMUST00000109542 1158 ntBASIC0.07□□□□□ -2.4
Col7a1Q63870 Gm14771-201ENSMUST00000118249 203 ntBASIC0.07□□□□□ -2.4
Col7a1Q63870 Gm14360-201ENSMUST00000120670 393 ntBASIC0.07□□□□□ -2.4
Col7a1Q63870 Gm14623-201ENSMUST00000121398 603 ntBASIC0.07□□□□□ -2.4
Col7a1Q63870 Gm26038-201ENSMUST00000158151 106 ntBASIC0.07□□□□□ -2.4
Col7a1Q63870 Gm22382-201ENSMUST00000158185 130 ntBASIC0.07□□□□□ -2.4
Col7a1Q63870 Gm28001-201ENSMUST00000183561 117 ntBASIC0.07□□□□□ -2.4
Col7a1Q63870 Mir7683-201ENSMUST00000183842 61 ntBASIC0.07□□□□□ -2.4
Col7a1Q63870 Gm42509-201ENSMUST00000197390 781 ntBASIC0.07□□□□□ -2.4
Col7a1Q63870 Obox4-ps25-201ENSMUST00000199090 210 ntBASIC0.07□□□□□ -2.4
Col7a1Q63870 Gm42739-201ENSMUST00000200687 226 ntBASIC0.07□□□□□ -2.4
Col7a1Q63870 Gm44459-201ENSMUST00000203926 160 ntBASIC0.07□□□□□ -2.4
Col7a1Q63870 Gm44088-201ENSMUST00000204595 237 ntBASIC0.07□□□□□ -2.4
Col7a1Q63870 Gm45023-201ENSMUST00000207951 379 ntBASIC0.07□□□□□ -2.4
Col7a1Q63870 AC122465.3-201ENSMUST00000221644 355 ntBASIC0.07□□□□□ -2.4
Col7a1Q63870 CT009764.1-201ENSMUST00000222260 483 ntBASIC0.07□□□□□ -2.4
Col7a1Q63870 CT030166.1-201ENSMUST00000222654 357 ntBASIC0.07□□□□□ -2.4
Col7a1Q63870 Gm24203-201ENSMUST00000082949 114 ntBASIC0.07□□□□□ -2.4
Col7a1Q63870 Gm26074-201ENSMUST00000104063 129 ntBASIC0.06□□□□□ -2.4
Col7a1Q63870 Gm25309-201ENSMUST00000116728 126 ntBASIC0.06□□□□□ -2.4
Col7a1Q63870 Olfr1144-ps1-201ENSMUST00000118227 328 ntBASIC0.06□□□□□ -2.4
Col7a1Q63870 Gm22087-201ENSMUST00000158339 88 ntBASIC0.06□□□□□ -2.4
Col7a1Q63870 Gm23761-201ENSMUST00000158347 104 ntBASIC0.06□□□□□ -2.4
Col7a1Q63870 Gm20698-201ENSMUST00000175657 233 ntBASIC0.06□□□□□ -2.4
Col7a1Q63870 Gm20874-201ENSMUST00000178356 663 ntBASIC0.06□□□□□ -2.4
Col7a1Q63870 Gm10719-203ENSMUST00000179272 675 ntAPPRIS ALT2 TSL 5 BASIC0.06□□□□□ -2.4
Col7a1Q63870 Gm27884-201ENSMUST00000183865 76 ntBASIC0.06□□□□□ -2.4
Col7a1Q63870 Gm5329-201ENSMUST00000186898 463 ntBASIC0.06□□□□□ -2.4
Col7a1Q63870 Tas2r113-201ENSMUST00000079035 930 ntAPPRIS P1 BASIC0.06□□□□□ -2.4
Col7a1Q63870 Tas2r131-201ENSMUST00000082085 1036 ntAPPRIS P1 BASIC0.06□□□□□ -2.4
Col7a1Q63870 Gm25560-201ENSMUST00000104606 176 ntBASIC0.06□□□□□ -2.4
Col7a1Q63870 Gm12053-201ENSMUST00000119022 252 ntBASIC0.06□□□□□ -2.4
Col7a1Q63870 Gm7350-201ENSMUST00000120964 636 ntBASIC0.06□□□□□ -2.4
Col7a1Q63870 n-R5s187-201ENSMUST00000122769 111 ntBASIC0.06□□□□□ -2.4
Col7a1Q63870 Gm25666-201ENSMUST00000157702 107 ntBASIC0.06□□□□□ -2.4
Col7a1Q63870 Rpl23a-ps12-201ENSMUST00000179178 468 ntBASIC0.06□□□□□ -2.4
Col7a1Q63870 Gm27289-201ENSMUST00000183341 82 ntBASIC0.06□□□□□ -2.4
Col7a1Q63870 Gm7329-201ENSMUST00000185915 210 ntBASIC0.06□□□□□ -2.4
Col7a1Q63870 Gm44137-201ENSMUST00000203670 367 ntBASIC0.06□□□□□ -2.4
Col7a1Q63870 Gm18268-201ENSMUST00000208445 943 ntBASIC0.06□□□□□ -2.4
Col7a1Q63870 Gm45374-201ENSMUST00000211388 136 ntBASIC0.06□□□□□ -2.4
Col7a1Q63870 Gm45704-201ENSMUST00000212582 403 ntBASIC0.06□□□□□ -2.4
Col7a1Q63870 AC153930.1-201ENSMUST00000220016 358 ntTSL 3 BASIC0.06□□□□□ -2.4
Col7a1Q63870 Gm24587-201ENSMUST00000116697 89 ntBASIC0.05□□□□□ -2.4
Col7a1Q63870 Gm14918-201ENSMUST00000118153 268 ntBASIC0.05□□□□□ -2.4
Col7a1Q63870 Gm26102-201ENSMUST00000157251 284 ntBASIC0.05□□□□□ -2.4
Col7a1Q63870 Gm23332-201ENSMUST00000157424 275 ntBASIC0.05□□□□□ -2.4
Col7a1Q63870 Mir3108-201ENSMUST00000175500 79 ntBASIC0.05□□□□□ -2.4
Col7a1Q63870 Mir3101-201ENSMUST00000175607 88 ntBASIC0.05□□□□□ -2.4
Col7a1Q63870 Gm20613-201ENSMUST00000175828 345 ntBASIC0.05□□□□□ -2.4
Col7a1Q63870 Gm21171-201ENSMUST00000180048 673 ntBASIC0.05□□□□□ -2.4
Col7a1Q63870 Gm24218-201ENSMUST00000180163 105 ntBASIC0.05□□□□□ -2.4
Col7a1Q63870 Gm18406-201ENSMUST00000185872 669 ntBASIC0.05□□□□□ -2.4
Col7a1Q63870 Gm28579-201ENSMUST00000186143 369 ntBASIC0.05□□□□□ -2.4
Col7a1Q63870 Gm29575-201ENSMUST00000190597 315 ntBASIC0.05□□□□□ -2.4
Col7a1Q63870 Gm18635-201ENSMUST00000199020 1060 ntBASIC0.05□□□□□ -2.4
Col7a1Q63870 AC127302.1-201ENSMUST00000215973 1111 ntBASIC0.05□□□□□ -2.4
Col7a1Q63870 AC123803.1-201ENSMUST00000216093 189 ntBASIC0.05□□□□□ -2.4
Col7a1Q63870 AC102352.1-201ENSMUST00000224187 582 ntBASIC0.05□□□□□ -2.4
Col7a1Q63870 Gm23102-201ENSMUST00000083724 116 ntBASIC0.05□□□□□ -2.4
Col7a1Q63870 AC122887.2-201ENSMUST00000219465 1603 ntBASIC0.05□□□□□ -2.4
Col7a1Q63870 Gm15497-201ENSMUST00000119137 551 ntBASIC0.05□□□□□ -2.4
Col7a1Q63870 n-R5s189-201ENSMUST00000122675 114 ntBASIC0.05□□□□□ -2.4
Col7a1Q63870 Gm25423-201ENSMUST00000157609 107 ntBASIC0.05□□□□□ -2.4
Col7a1Q63870 Gm22706-201ENSMUST00000157907 112 ntBASIC0.05□□□□□ -2.4
Col7a1Q63870 Gm25335-201ENSMUST00000158043 103 ntBASIC0.05□□□□□ -2.4
Col7a1Q63870 Gm24229-201ENSMUST00000158830 118 ntBASIC0.05□□□□□ -2.4
Retrieved 100 of 76,532 protein–RNA pairs in 88.5 ms