Protein–RNA interactions for Protein: Q62231

Six1, Homeobox protein SIX1, mousemouse

Predictions only

Length 284 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Six1Q62231 Gm45119-201ENSMUST00000207612 199 ntBASIC2.16□□□□□ -2.06
Six1Q62231 Nbdy-205ENSMUST00000208235 132 ntAPPRIS P2 TSL 2 BASIC2.16□□□□□ -2.06
Six1Q62231 Gm45704-201ENSMUST00000212582 403 ntBASIC2.16□□□□□ -2.06
Six1Q62231 Gm39473-201ENSMUST00000223498 522 ntTSL 3 BASIC2.16□□□□□ -2.06
Six1Q62231 Gm9174-201ENSMUST00000078149 255 ntBASIC2.16□□□□□ -2.06
Six1Q62231 Olfr1201-203ENSMUST00000216213 2602 ntAPPRIS P1 TSL 5 BASIC2.16□□□□□ -2.06
Six1Q62231 Snhg14-213ENSMUST00000190666 3708 ntTSL 1 (best) BASIC2.16□□□□□ -2.06
Six1Q62231 Gm37941-201ENSMUST00000192170 2309 ntBASIC2.16□□□□□ -2.06
Six1Q62231 Gm13457-201ENSMUST00000117885 267 ntBASIC2.15□□□□□ -2.07
Six1Q62231 Gm23586-201ENSMUST00000157657 123 ntBASIC2.15□□□□□ -2.07
Six1Q62231 Gm24237-201ENSMUST00000157790 132 ntBASIC2.15□□□□□ -2.07
Six1Q62231 Gm23641-201ENSMUST00000157857 101 ntBASIC2.15□□□□□ -2.07
Six1Q62231 Gm23033-201ENSMUST00000157996 134 ntBASIC2.15□□□□□ -2.07
Six1Q62231 Gm24499-201ENSMUST00000158446 104 ntBASIC2.15□□□□□ -2.07
Six1Q62231 Gm24056-201ENSMUST00000158617 146 ntBASIC2.15□□□□□ -2.07
Six1Q62231 Gm10717-205ENSMUST00000177601 645 ntAPPRIS ALT2 TSL 5 BASIC2.15□□□□□ -2.07
Six1Q62231 Gm27753-201ENSMUST00000184742 203 ntBASIC2.15□□□□□ -2.07
Six1Q62231 Gm28838-201ENSMUST00000186338 315 ntBASIC2.15□□□□□ -2.07
Six1Q62231 Gm29635-201ENSMUST00000187221 315 ntBASIC2.15□□□□□ -2.07
Six1Q62231 Gm29026-201ENSMUST00000187787 315 ntBASIC2.15□□□□□ -2.07
Six1Q62231 Gm28797-201ENSMUST00000188543 315 ntBASIC2.15□□□□□ -2.07
Six1Q62231 Gm28855-201ENSMUST00000188680 315 ntBASIC2.15□□□□□ -2.07
Six1Q62231 Gm28930-201ENSMUST00000189525 437 ntTSL 5 BASIC2.15□□□□□ -2.07
Six1Q62231 Gm28705-201ENSMUST00000189548 315 ntBASIC2.15□□□□□ -2.07
Six1Q62231 Gm28939-201ENSMUST00000190351 315 ntBASIC2.15□□□□□ -2.07
Six1Q62231 Gm28223-201ENSMUST00000190469 315 ntBASIC2.15□□□□□ -2.07
Six1Q62231 Gm29092-201ENSMUST00000190768 315 ntBASIC2.15□□□□□ -2.07
Six1Q62231 Gm43562-201ENSMUST00000196439 238 ntTSL 3 BASIC2.15□□□□□ -2.07
Six1Q62231 Mir7118-201ENSMUST00000197760 61 ntBASIC2.15□□□□□ -2.07
Six1Q62231 AC154296.1-201ENSMUST00000198150 67 ntBASIC2.15□□□□□ -2.07
Six1Q62231 Mir378a-201ENSMUST00000198300 66 ntBASIC2.15□□□□□ -2.07
Six1Q62231 Trav15n-3-201ENSMUST00000200498 168 ntBASIC2.15□□□□□ -2.07
Six1Q62231 Gm7240-201ENSMUST00000220769 664 ntBASIC2.15□□□□□ -2.07
Six1Q62231 AC161758.2-201ENSMUST00000228513 218 ntBASIC2.15□□□□□ -2.07
Six1Q62231 Gm10298-201ENSMUST00000074801 265 ntBASIC2.15□□□□□ -2.07
Six1Q62231 Gm18360-201ENSMUST00000173327 1524 ntBASIC2.15□□□□□ -2.07
Six1Q62231 Gm650-201ENSMUST00000144428 1551 ntBASIC2.15□□□□□ -2.07
Six1Q62231 Olfr394-202ENSMUST00000214284 5562 ntAPPRIS P1 TSL 5 BASIC2.15□□□□□ -2.07
Six1Q62231 Acer3-202ENSMUST00000120520 3964 ntTSL 1 (best) BASIC2.14□□□□□ -2.07
Six1Q62231 Zfp273-201ENSMUST00000012725 2277 ntTSL 1 (best) BASIC2.14□□□□□ -2.07
Six1Q62231 Mir701-201ENSMUST00000102208 109 ntBASIC2.14□□□□□ -2.07
Six1Q62231 Ighv9-3-201ENSMUST00000103473 351 ntAPPRIS P1 BASIC2.14□□□□□ -2.07
Six1Q62231 Gm15183-201ENSMUST00000118933 348 ntBASIC2.14□□□□□ -2.07
Six1Q62231 Defa-ps13-201ENSMUST00000120695 204 ntBASIC2.14□□□□□ -2.07
Six1Q62231 Gm12876-201ENSMUST00000120975 408 ntBASIC2.14□□□□□ -2.07
Six1Q62231 n-R5s164-201ENSMUST00000122664 112 ntBASIC2.14□□□□□ -2.07
Six1Q62231 Gm24481-201ENSMUST00000157210 102 ntBASIC2.14□□□□□ -2.07
Six1Q62231 Gm25982-201ENSMUST00000157920 101 ntBASIC2.14□□□□□ -2.07
Six1Q62231 Gm22666-201ENSMUST00000158717 164 ntBASIC2.14□□□□□ -2.07
Six1Q62231 Gm22664-201ENSMUST00000158719 105 ntBASIC2.14□□□□□ -2.07
Six1Q62231 Gm23342-201ENSMUST00000158958 115 ntBASIC2.14□□□□□ -2.07
Six1Q62231 Gm5329-201ENSMUST00000186898 463 ntBASIC2.14□□□□□ -2.07
Six1Q62231 Obox4-ps25-201ENSMUST00000199090 210 ntBASIC2.14□□□□□ -2.07
Six1Q62231 Defa-ps13-202ENSMUST00000212360 204 ntTSL 1 (best) BASIC2.14□□□□□ -2.07
Six1Q62231 AC164297.3-201ENSMUST00000224238 94 ntBASIC2.14□□□□□ -2.07
Six1Q62231 AC163646.2-201ENSMUST00000227962 141 ntBASIC2.14□□□□□ -2.07
Six1Q62231 1700010L04Rik-201ENSMUST00000032872 330 ntTSL 5 BASIC2.14□□□□□ -2.07
Six1Q62231 Gm22620-201ENSMUST00000082700 133 ntBASIC2.14□□□□□ -2.07
Six1Q62231 Gm26327-201ENSMUST00000093724 111 ntBASIC2.14□□□□□ -2.07
Six1Q62231 Zfp160-201ENSMUST00000088811 3791 ntAPPRIS P1 TSL 1 (best) BASIC2.14□□□□□ -2.07
Six1Q62231 Olfr1291-ps1-201ENSMUST00000121345 5403 ntAPPRIS P1 TSL 5 BASIC2.13□□□□□ -2.07
Six1Q62231 Ighv1-47-201ENSMUST00000103518 294 ntAPPRIS P1 BASIC2.13□□□□□ -2.07
Six1Q62231 Gm25526-201ENSMUST00000104332 132 ntBASIC2.13□□□□□ -2.07
Six1Q62231 Gm22032-201ENSMUST00000116946 116 ntBASIC2.13□□□□□ -2.07
Six1Q62231 Gm15714-201ENSMUST00000117168 250 ntBASIC2.13□□□□□ -2.07
Six1Q62231 Rhox11-ps2-201ENSMUST00000117962 451 ntBASIC2.13□□□□□ -2.07
Six1Q62231 Gm14972-201ENSMUST00000121780 364 ntBASIC2.13□□□□□ -2.07
Six1Q62231 Gm16349-201ENSMUST00000149990 394 ntTSL 3 BASIC2.13□□□□□ -2.07
Six1Q62231 Gm24716-201ENSMUST00000157524 104 ntBASIC2.13□□□□□ -2.07
Six1Q62231 Mir6370-201ENSMUST00000183510 120 ntBASIC2.13□□□□□ -2.07
Six1Q62231 1700015G11Rik-203ENSMUST00000185841 305 ntAPPRIS ALT2 TSL 5 BASIC2.13□□□□□ -2.07
Six1Q62231 Gm28740-201ENSMUST00000186142 215 ntBASIC2.13□□□□□ -2.07
Six1Q62231 Gm29229-201ENSMUST00000188874 323 ntBASIC2.13□□□□□ -2.07
Six1Q62231 Gm44844-201ENSMUST00000207242 336 ntBASIC2.13□□□□□ -2.07
Six1Q62231 Gm45403-201ENSMUST00000209453 276 ntBASIC2.13□□□□□ -2.07
Six1Q62231 Lilr4b-211ENSMUST00000219661 1143 ntTSL 1 (best) BASIC2.13□□□□□ -2.07
Six1Q62231 1700030L22Rik-201ENSMUST00000221214 567 ntTSL 5 BASIC2.13□□□□□ -2.07
Six1Q62231 Gm33654-201ENSMUST00000221704 215 ntBASIC2.13□□□□□ -2.07
Six1Q62231 AC154472.1-201ENSMUST00000222663 236 ntTSL 3 BASIC2.13□□□□□ -2.07
Six1Q62231 Gm21937-201ENSMUST00000222825 218 ntBASIC2.13□□□□□ -2.07
Six1Q62231 AC125311.1-201ENSMUST00000226950 220 ntBASIC2.13□□□□□ -2.07
Six1Q62231 Defb21-201ENSMUST00000070722 427 ntAPPRIS P1 TSL 1 (best) BASIC2.13□□□□□ -2.07
Six1Q62231 Pip-201ENSMUST00000075351 588 ntAPPRIS P1 TSL 1 (best) BASIC2.13□□□□□ -2.07
Six1Q62231 Gm22443-201ENSMUST00000082890 107 ntBASIC2.13□□□□□ -2.07
Six1Q62231 AC132221.1-201ENSMUST00000220577 3841 ntBASIC2.13□□□□□ -2.07
Six1Q62231 Olfr1229-203ENSMUST00000214593 3404 ntAPPRIS P1 TSL 5 BASIC2.13□□□□□ -2.07
Six1Q62231 C230088H06Rik-202ENSMUST00000181752 3010 ntTSL 5 BASIC2.12□□□□□ -2.07
Six1Q62231 Olfr1208-203ENSMUST00000214297 2844 ntAPPRIS P1 TSL 5 BASIC2.12□□□□□ -2.07
Six1Q62231 Gm24275-201ENSMUST00000116780 146 ntBASIC2.12□□□□□ -2.07
Six1Q62231 Gm14073-201ENSMUST00000117344 381 ntBASIC2.12□□□□□ -2.07
Six1Q62231 Rpl31-ps6-201ENSMUST00000119959 378 ntBASIC2.12□□□□□ -2.07
Six1Q62231 Gm22037-201ENSMUST00000157280 296 ntBASIC2.12□□□□□ -2.07
Six1Q62231 Gm22389-201ENSMUST00000158193 301 ntBASIC2.12□□□□□ -2.07
Six1Q62231 Gm24737-201ENSMUST00000158861 100 ntBASIC2.12□□□□□ -2.07
Six1Q62231 Gm16584-201ENSMUST00000159267 189 ntBASIC2.12□□□□□ -2.07
Six1Q62231 Gm7953-201ENSMUST00000168278 469 ntBASIC2.12□□□□□ -2.07
Six1Q62231 Gm17919-201ENSMUST00000173344 312 ntBASIC2.12□□□□□ -2.07
Six1Q62231 Gm25642-201ENSMUST00000175137 66 ntBASIC2.12□□□□□ -2.07
Six1Q62231 Gm23933-201ENSMUST00000178405 79 ntBASIC2.12□□□□□ -2.07
Six1Q62231 Gm23793-201ENSMUST00000179396 117 ntBASIC2.12□□□□□ -2.07
Retrieved 100 of 76,532 protein–RNA pairs in 93.9 ms