Protein–RNA interactions for Protein: Q62158

Trim27, Zinc finger protein RFP, mousemouse

Predictions only

Length 513 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim27Q62158 Gm45315-201ENSMUST00000209283 333 ntBASIC2.57□□□□□ -2
Trim27Q62158 4930543K20Rik-201ENSMUST00000217044 355 ntBASIC2.57□□□□□ -2
Trim27Q62158 Gm25130-201ENSMUST00000082650 156 ntBASIC2.57□□□□□ -2
Trim27Q62158 2410141K09Rik-201ENSMUST00000091541 288 ntTSL 5 BASIC2.57□□□□□ -2
Trim27Q62158 Tlr8-202ENSMUST00000112170 3431 ntAPPRIS P1 TSL 2 BASIC2.56□□□□□ -2
Trim27Q62158 Arhgap5-202ENSMUST00000217820 2332 ntTSL 5 BASIC2.56□□□□□ -2
Trim27Q62158 Gm24049-201ENSMUST00000102409 100 ntBASIC2.56□□□□□ -2
Trim27Q62158 Mir344e-201ENSMUST00000104677 66 ntBASIC2.56□□□□□ -2
Trim27Q62158 Gm14774-201ENSMUST00000117857 536 ntBASIC2.56□□□□□ -2
Trim27Q62158 Gm13565-201ENSMUST00000133596 700 ntTSL 1 (best) BASIC2.56□□□□□ -2
Trim27Q62158 Gm22654-201ENSMUST00000157874 105 ntBASIC2.56□□□□□ -2
Trim27Q62158 Gm24419-201ENSMUST00000157875 332 ntBASIC2.56□□□□□ -2
Trim27Q62158 Gm24211-201ENSMUST00000158264 107 ntBASIC2.56□□□□□ -2
Trim27Q62158 Gm22136-201ENSMUST00000158751 268 ntBASIC2.56□□□□□ -2
Trim27Q62158 Igkv17-134-201ENSMUST00000168310 348 ntBASIC2.56□□□□□ -2
Trim27Q62158 Mir7215-201ENSMUST00000200383 51 ntBASIC2.56□□□□□ -2
Trim27Q62158 Gm44726-201ENSMUST00000203427 217 ntBASIC2.56□□□□□ -2
Trim27Q62158 Gm44182-201ENSMUST00000204052 115 ntBASIC2.56□□□□□ -2
Trim27Q62158 Gm45556-201ENSMUST00000210689 345 ntTSL 5 BASIC2.56□□□□□ -2
Trim27Q62158 AC188459.1-201ENSMUST00000216651 300 ntBASIC2.56□□□□□ -2
Trim27Q62158 Gm40810-201ENSMUST00000219149 253 ntBASIC2.56□□□□□ -2
Trim27Q62158 Gm16368-201ENSMUST00000222340 435 ntAPPRIS P1 BASIC2.56□□□□□ -2
Trim27Q62158 AC183096.2-201ENSMUST00000228733 457 ntBASIC2.56□□□□□ -2
Trim27Q62158 Gm24037-201ENSMUST00000082871 180 ntBASIC2.56□□□□□ -2
Trim27Q62158 Gm12304-201ENSMUST00000120312 385 ntBASIC2.55□□□□□ -2
Trim27Q62158 Gm25321-201ENSMUST00000122558 102 ntBASIC2.55□□□□□ -2
Trim27Q62158 Gm25961-201ENSMUST00000157174 135 ntBASIC2.55□□□□□ -2
Trim27Q62158 Gm25460-201ENSMUST00000157954 127 ntBASIC2.55□□□□□ -2
Trim27Q62158 Gm25335-201ENSMUST00000158043 103 ntBASIC2.55□□□□□ -2
Trim27Q62158 Gm25488-201ENSMUST00000158728 118 ntBASIC2.55□□□□□ -2
Trim27Q62158 Gm23342-201ENSMUST00000158958 115 ntBASIC2.55□□□□□ -2
Trim27Q62158 Mir5118-201ENSMUST00000175551 67 ntBASIC2.55□□□□□ -2
Trim27Q62158 Vmn1r-ps9-201ENSMUST00000177047 358 ntBASIC2.55□□□□□ -2
Trim27Q62158 Gm18356-201ENSMUST00000185677 623 ntBASIC2.55□□□□□ -2
Trim27Q62158 Gm43708-201ENSMUST00000198857 961 ntBASIC2.55□□□□□ -2
Trim27Q62158 Gm44071-201ENSMUST00000204180 448 ntTSL 1 (best) BASIC2.55□□□□□ -2
Trim27Q62158 Gm17990-201ENSMUST00000211728 553 ntBASIC2.55□□□□□ -2
Trim27Q62158 Gm45911-201ENSMUST00000211844 601 ntTSL 3 BASIC2.55□□□□□ -2
Trim27Q62158 AC173345.1-201ENSMUST00000222837 306 ntTSL 5 BASIC2.55□□□□□ -2
Trim27Q62158 Gm26265-201ENSMUST00000083277 135 ntBASIC2.55□□□□□ -2
Trim27Q62158 Olfr199-202ENSMUST00000214186 2728 ntAPPRIS P1 TSL 5 BASIC2.55□□□□□ -2
Trim27Q62158 Olfr1496-202ENSMUST00000209137 2394 ntAPPRIS ALT1 TSL 5 BASIC2.54□□□□□ -2
Trim27Q62158 Vmn1r67-202ENSMUST00000226237 2352 ntAPPRIS ALT2 BASIC2.54□□□□□ -2
Trim27Q62158 Gm24172-201ENSMUST00000104127 117 ntBASIC2.54□□□□□ -2
Trim27Q62158 Mdga2-203ENSMUST00000113942 423 ntBASIC2.54□□□□□ -2
Trim27Q62158 Gm14402-201ENSMUST00000122217 508 ntBASIC2.54□□□□□ -2
Trim27Q62158 Esp4-201ENSMUST00000178498 553 ntAPPRIS P1 TSL 1 (best) BASIC2.54□□□□□ -2
Trim27Q62158 Cypt14-201ENSMUST00000179096 508 ntAPPRIS P1 TSL 1 (best) BASIC2.54□□□□□ -2
Trim27Q62158 Gm27588-201ENSMUST00000185096 263 ntBASIC2.54□□□□□ -2
Trim27Q62158 Gm28494-201ENSMUST00000187687 562 ntTSL 5 BASIC2.54□□□□□ -2
Trim27Q62158 Gm28414-201ENSMUST00000190111 294 ntBASIC2.54□□□□□ -2
Trim27Q62158 Gm37845-201ENSMUST00000194977 355 ntBASIC2.54□□□□□ -2
Trim27Q62158 Igkv12-49-201ENSMUST00000197714 278 ntBASIC2.54□□□□□ -2
Trim27Q62158 Tnfrsf23-203ENSMUST00000208017 544 ntTSL 3 BASIC2.54□□□□□ -2
Trim27Q62158 Olfr546-ps1-201ENSMUST00000210328 326 ntBASIC2.54□□□□□ -2
Trim27Q62158 AC155715.1-201ENSMUST00000213575 463 ntBASIC2.54□□□□□ -2
Trim27Q62158 Gm20102-201ENSMUST00000222445 220 ntBASIC2.54□□□□□ -2
Trim27Q62158 AC164297.5-201ENSMUST00000224365 198 ntBASIC2.54□□□□□ -2
Trim27Q62158 Gm14797-201ENSMUST00000119378 1480 ntBASIC2.53□□□□□ -2
Trim27Q62158 Gm25485-201ENSMUST00000104120 132 ntBASIC2.53□□□□□ -2
Trim27Q62158 Gm14269-201ENSMUST00000120455 306 ntBASIC2.53□□□□□ -2
Trim27Q62158 Gm23169-201ENSMUST00000157157 112 ntBASIC2.53□□□□□ -2
Trim27Q62158 Gm23381-201ENSMUST00000157676 94 ntBASIC2.53□□□□□ -2
Trim27Q62158 Gm8292-201ENSMUST00000162574 396 ntBASIC2.53□□□□□ -2
Trim27Q62158 Gm22192-201ENSMUST00000175128 85 ntBASIC2.53□□□□□ -2
Trim27Q62158 Il6st-202ENSMUST00000183513 201 ntTSL 5 BASIC2.53□□□□□ -2
Trim27Q62158 Gm27443-201ENSMUST00000184660 98 ntBASIC2.53□□□□□ -2
Trim27Q62158 Gm19261-201ENSMUST00000189628 539 ntTSL 2 BASIC2.53□□□□□ -2
Trim27Q62158 Gm34073-201ENSMUST00000195736 212 ntBASIC2.53□□□□□ -2
Trim27Q62158 1700072O05Rik-201ENSMUST00000204672 321 ntTSL 5 BASIC2.53□□□□□ -2
Trim27Q62158 Gm6109-201ENSMUST00000223297 348 ntBASIC2.53□□□□□ -2
Trim27Q62158 CT025603.4-201ENSMUST00000225777 413 ntBASIC2.53□□□□□ -2
Trim27Q62158 Gm25632-201ENSMUST00000083112 85 ntBASIC2.53□□□□□ -2
Trim27Q62158 Snord104-201ENSMUST00000083192 70 ntBASIC2.53□□□□□ -2
Trim27Q62158 Gm18795-201ENSMUST00000222371 3266 ntTSL 5 BASIC2.53□□□□□ -2
Trim27Q62158 Gm25094-201ENSMUST00000103992 131 ntBASIC2.52□□□□□ -2.01
Trim27Q62158 Gm26342-201ENSMUST00000104557 129 ntBASIC2.52□□□□□ -2.01
Trim27Q62158 Gm13885-201ENSMUST00000117569 187 ntBASIC2.52□□□□□ -2.01
Trim27Q62158 Olfr1078-ps1-201ENSMUST00000117978 632 ntBASIC2.52□□□□□ -2.01
Trim27Q62158 Gm3027-201ENSMUST00000167579 451 ntBASIC2.52□□□□□ -2.01
Trim27Q62158 Gm25642-201ENSMUST00000175137 66 ntBASIC2.52□□□□□ -2.01
Trim27Q62158 Gm19932-201ENSMUST00000177033 313 ntBASIC2.52□□□□□ -2.01
Trim27Q62158 Gm21737-201ENSMUST00000178112 664 ntBASIC2.52□□□□□ -2.01
Trim27Q62158 Gm21815-201ENSMUST00000178213 664 ntBASIC2.52□□□□□ -2.01
Trim27Q62158 Gm20901-201ENSMUST00000180177 664 ntBASIC2.52□□□□□ -2.01
Trim27Q62158 Gm28090-201ENSMUST00000189458 664 ntBASIC2.52□□□□□ -2.01
Trim27Q62158 Gm21647-201ENSMUST00000189755 664 ntBASIC2.52□□□□□ -2.01
Trim27Q62158 Gm28951-201ENSMUST00000190742 313 ntBASIC2.52□□□□□ -2.01
Trim27Q62158 Gm37923-201ENSMUST00000191624 161 ntBASIC2.52□□□□□ -2.01
Trim27Q62158 Gm32033-201ENSMUST00000193483 339 ntBASIC2.52□□□□□ -2.01
Trim27Q62158 Gm43358-201ENSMUST00000199217 970 ntTSL 1 (best) BASIC2.52□□□□□ -2.01
Trim27Q62158 Gm43131-201ENSMUST00000200042 969 ntTSL 5 BASIC2.52□□□□□ -2.01
Trim27Q62158 AC117198.1-201ENSMUST00000217080 651 ntTSL 5 BASIC2.52□□□□□ -2.01
Trim27Q62158 Serf1-201ENSMUST00000022145 601 ntAPPRIS P1 TSL 1 (best) BASIC2.52□□□□□ -2.01
Trim27Q62158 AC114010.1-201ENSMUST00000222060 379 ntBASIC2.52□□□□□ -2.01
Trim27Q62158 Zmynd11-223ENSMUST00000222358 340 ntTSL 5 BASIC2.52□□□□□ -2.01
Trim27Q62158 Gm23462-201ENSMUST00000083264 104 ntBASIC2.52□□□□□ -2.01
Trim27Q62158 Gm22866-201ENSMUST00000083947 177 ntBASIC2.52□□□□□ -2.01
Trim27Q62158 Gm3867-201ENSMUST00000086108 279 ntBASIC2.52□□□□□ -2.01
Trim27Q62158 Gm38388-201ENSMUST00000195569 1430 ntBASIC2.51□□□□□ -2.01
Retrieved 100 of 76,532 protein–RNA pairs in 86.5 ms