Protein–RNA interactions for Protein: Q61069

Usf1, Upstream stimulatory factor 1, mousemouse

Predictions only

Length 310 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usf1Q61069 Trav15d-3-201ENSMUST00000198604 167 ntBASIC1.77□□□□□ -2.13
Usf1Q61069 Trav15n-3-201ENSMUST00000200498 168 ntBASIC1.77□□□□□ -2.13
Usf1Q61069 Olfr1482-ps1-201ENSMUST00000207181 178 ntBASIC1.77□□□□□ -2.13
Usf1Q61069 Tnfrsf23-203ENSMUST00000208017 544 ntTSL 3 BASIC1.77□□□□□ -2.13
Usf1Q61069 Gm45355-201ENSMUST00000211342 296 ntTSL 3 BASIC1.77□□□□□ -2.13
Usf1Q61069 Olfr792-202ENSMUST00000215436 2113 ntAPPRIS P1 TSL 5 BASIC1.77□□□□□ -2.13
Usf1Q61069 AC188459.1-201ENSMUST00000216651 300 ntBASIC1.77□□□□□ -2.13
Usf1Q61069 Gm45941-202ENSMUST00000223144 389 ntTSL 2 BASIC1.77□□□□□ -2.13
Usf1Q61069 Gm39473-201ENSMUST00000223498 522 ntTSL 3 BASIC1.77□□□□□ -2.13
Usf1Q61069 CT010480.5-201ENSMUST00000225026 217 ntBASIC1.77□□□□□ -2.13
Usf1Q61069 Olfr822-201ENSMUST00000080460 942 ntAPPRIS P1 BASIC1.77□□□□□ -2.13
Usf1Q61069 Gm24150-201ENSMUST00000082759 104 ntBASIC1.77□□□□□ -2.13
Usf1Q61069 Gm25475-201ENSMUST00000082825 180 ntBASIC1.77□□□□□ -2.13
Usf1Q61069 Olfr987-201ENSMUST00000099929 1075 ntAPPRIS P1 BASIC1.77□□□□□ -2.13
Usf1Q61069 Gm14390-201ENSMUST00000117505 1695 ntBASIC1.77□□□□□ -2.13
Usf1Q61069 Trdn-201ENSMUST00000095762 4514 ntAPPRIS P2 TSL 5 BASIC1.76□□□□□ -2.13
Usf1Q61069 Gm22834-201ENSMUST00000102021 79 ntBASIC1.76□□□□□ -2.13
Usf1Q61069 Gm22037-201ENSMUST00000157280 296 ntBASIC1.76□□□□□ -2.13
Usf1Q61069 Gm25368-201ENSMUST00000158847 131 ntBASIC1.76□□□□□ -2.13
Usf1Q61069 Gm17689-201ENSMUST00000170030 330 ntAPPRIS P1 TSL 1 (best) BASIC1.76□□□□□ -2.13
Usf1Q61069 Gm25457-201ENSMUST00000179509 107 ntBASIC1.76□□□□□ -2.13
Usf1Q61069 Gm27226-201ENSMUST00000184676 511 ntTSL 2 BASIC1.76□□□□□ -2.13
Usf1Q61069 Gm37228-201ENSMUST00000193574 331 ntTSL 5 BASIC1.76□□□□□ -2.13
Usf1Q61069 Gm42672-201ENSMUST00000197821 352 ntBASIC1.76□□□□□ -2.13
Usf1Q61069 AL928567.1-201ENSMUST00000197891 138 ntBASIC1.76□□□□□ -2.13
Usf1Q61069 Gm44336-201ENSMUST00000203696 468 ntBASIC1.76□□□□□ -2.13
Usf1Q61069 Gm35077-201ENSMUST00000204999 275 ntTSL 3 BASIC1.76□□□□□ -2.13
Usf1Q61069 AC144671.1-201ENSMUST00000215265 99 ntBASIC1.76□□□□□ -2.13
Usf1Q61069 AC158597.1-201ENSMUST00000216234 150 ntBASIC1.76□□□□□ -2.13
Usf1Q61069 AC114916.1-201ENSMUST00000228465 494 ntBASIC1.76□□□□□ -2.13
Usf1Q61069 Olfr821-201ENSMUST00000054364 933 ntAPPRIS P1 BASIC1.76□□□□□ -2.13
Usf1Q61069 Snora33-201ENSMUST00000093556 129 ntBASIC1.76□□□□□ -2.13
Usf1Q61069 Gm22678-201ENSMUST00000116974 101 ntBASIC1.75□□□□□ -2.13
Usf1Q61069 Gm12721-201ENSMUST00000120621 268 ntBASIC1.75□□□□□ -2.13
Usf1Q61069 Gm11891-201ENSMUST00000121241 619 ntBASIC1.75□□□□□ -2.13
Usf1Q61069 Gm12162-202ENSMUST00000129432 127 ntTSL 5 BASIC1.75□□□□□ -2.13
Usf1Q61069 Gm12325-201ENSMUST00000135553 320 ntTSL 5 BASIC1.75□□□□□ -2.13
Usf1Q61069 Gm26278-201ENSMUST00000157098 132 ntBASIC1.75□□□□□ -2.13
Usf1Q61069 Gm23331-201ENSMUST00000157423 108 ntBASIC1.75□□□□□ -2.13
Usf1Q61069 Vmn2r-ps55-201ENSMUST00000173834 240 ntBASIC1.75□□□□□ -2.13
Usf1Q61069 Vmn1r-ps15-201ENSMUST00000177365 910 ntBASIC1.75□□□□□ -2.13
Usf1Q61069 Gm27624-201ENSMUST00000185047 177 ntBASIC1.75□□□□□ -2.13
Usf1Q61069 Gm37119-201ENSMUST00000195691 389 ntBASIC1.75□□□□□ -2.13
Usf1Q61069 Gm44446-201ENSMUST00000204864 255 ntBASIC1.75□□□□□ -2.13
Usf1Q61069 Gm17990-201ENSMUST00000211728 553 ntBASIC1.75□□□□□ -2.13
Usf1Q61069 AC125488.1-201ENSMUST00000219586 212 ntBASIC1.75□□□□□ -2.13
Usf1Q61069 Gm23097-201ENSMUST00000083448 105 ntBASIC1.75□□□□□ -2.13
Usf1Q61069 Mir29b-2-201ENSMUST00000083478 81 ntBASIC1.75□□□□□ -2.13
Usf1Q61069 Gm42536-201ENSMUST00000197562 1613 ntBASIC1.74□□□□□ -2.13
Usf1Q61069 Igkv17-127-201ENSMUST00000103309 341 ntAPPRIS ALT2 BASIC1.74□□□□□ -2.13
Usf1Q61069 Gm25068-201ENSMUST00000103895 110 ntBASIC1.74□□□□□ -2.13
Usf1Q61069 Gm10972-201ENSMUST00000107276 81 ntAPPRIS P1 TSL 5 BASIC1.74□□□□□ -2.13
Usf1Q61069 Gm26474-201ENSMUST00000116762 122 ntBASIC1.74□□□□□ -2.13
Usf1Q61069 Gm13885-201ENSMUST00000117569 187 ntBASIC1.74□□□□□ -2.13
Usf1Q61069 Gm16242-201ENSMUST00000117741 334 ntBASIC1.74□□□□□ -2.13
Usf1Q61069 Gm24481-201ENSMUST00000157210 102 ntBASIC1.74□□□□□ -2.13
Usf1Q61069 Gm25625-201ENSMUST00000157221 96 ntBASIC1.74□□□□□ -2.13
Usf1Q61069 Gm16043-201ENSMUST00000160030 616 ntTSL 3 BASIC1.74□□□□□ -2.13
Usf1Q61069 Vmn1r-ps47-201ENSMUST00000176694 907 ntBASIC1.74□□□□□ -2.13
Usf1Q61069 Gm24388-201ENSMUST00000177872 107 ntBASIC1.74□□□□□ -2.13
Usf1Q61069 Gm26864-201ENSMUST00000181346 156 ntBASIC1.74□□□□□ -2.13
Usf1Q61069 Gm27588-201ENSMUST00000185096 263 ntBASIC1.74□□□□□ -2.13
Usf1Q61069 Gm29352-201ENSMUST00000188054 544 ntBASIC1.74□□□□□ -2.13
Usf1Q61069 Gm28437-201ENSMUST00000190277 783 ntBASIC1.74□□□□□ -2.13
Usf1Q61069 Gm37650-201ENSMUST00000193570 248 ntTSL 1 (best) BASIC1.74□□□□□ -2.13
Usf1Q61069 Smr2-203ENSMUST00000196477 676 ntAPPRIS ALT2 TSL 1 (best) BASIC1.74□□□□□ -2.13
Usf1Q61069 Smr2-204ENSMUST00000199635 680 ntAPPRIS ALT2 TSL 1 (best) BASIC1.74□□□□□ -2.13
Usf1Q61069 AL772265.1-201ENSMUST00000214379 305 ntBASIC1.74□□□□□ -2.13
Usf1Q61069 AC153864.2-201ENSMUST00000220424 292 ntBASIC1.74□□□□□ -2.13
Usf1Q61069 Defb37-201ENSMUST00000066282 352 ntAPPRIS P1 TSL 1 (best) BASIC1.74□□□□□ -2.13
Usf1Q61069 Sval3-201ENSMUST00000080742 550 ntAPPRIS P1 TSL 1 (best) BASIC1.74□□□□□ -2.13
Usf1Q61069 Gm26126-201ENSMUST00000083188 164 ntBASIC1.74□□□□□ -2.13
Usf1Q61069 Defb41-201ENSMUST00000088463 467 ntTSL 1 (best) BASIC1.74□□□□□ -2.13
Usf1Q61069 1110057P08Rik-201ENSMUST00000089097 465 ntAPPRIS P1 BASIC1.74□□□□□ -2.13
Usf1Q61069 Vmn1r185-210ENSMUST00000228367 6982 ntAPPRIS P1 BASIC1.74□□□□□ -2.13
Usf1Q61069 Olfr1094-202ENSMUST00000217509 1693 ntAPPRIS P1 TSL 5 BASIC1.74□□□□□ -2.13
Usf1Q61069 Mir743b-201ENSMUST00000104751 77 ntBASIC1.73□□□□□ -2.13
Usf1Q61069 Gm25559-201ENSMUST00000157182 74 ntBASIC1.73□□□□□ -2.13
Usf1Q61069 Gm22328-201ENSMUST00000158074 112 ntBASIC1.73□□□□□ -2.13
Usf1Q61069 Gm24393-201ENSMUST00000158135 97 ntBASIC1.73□□□□□ -2.13
Usf1Q61069 Gm25012-201ENSMUST00000158396 164 ntBASIC1.73□□□□□ -2.13
Usf1Q61069 Gm23059-201ENSMUST00000158978 107 ntBASIC1.73□□□□□ -2.13
Usf1Q61069 Mir9-3-201ENSMUST00000175497 90 ntBASIC1.73□□□□□ -2.13
Usf1Q61069 Gm27013-201ENSMUST00000182441 1024 ntBASIC1.73□□□□□ -2.13
Usf1Q61069 Gm18775-201ENSMUST00000190763 586 ntBASIC1.73□□□□□ -2.13
Usf1Q61069 Trav5d-2-201ENSMUST00000196107 275 ntBASIC1.73□□□□□ -2.13
Usf1Q61069 Trav5n-2-201ENSMUST00000197136 275 ntBASIC1.73□□□□□ -2.13
Usf1Q61069 Gm3724-201ENSMUST00000197957 349 ntBASIC1.73□□□□□ -2.13
Usf1Q61069 Gm18696-201ENSMUST00000220103 274 ntBASIC1.73□□□□□ -2.13
Usf1Q61069 Olfr497-201ENSMUST00000076406 945 ntAPPRIS P1 BASIC1.73□□□□□ -2.13
Usf1Q61069 Gm22062-201ENSMUST00000082563 107 ntBASIC1.73□□□□□ -2.13
Usf1Q61069 Mir300-201ENSMUST00000083485 79 ntBASIC1.73□□□□□ -2.13
Usf1Q61069 Olfr1291-ps1-201ENSMUST00000121345 5403 ntAPPRIS P1 TSL 5 BASIC1.73□□□□□ -2.13
Usf1Q61069 Gm38388-201ENSMUST00000195569 1430 ntBASIC1.73□□□□□ -2.13
Usf1Q61069 Zfp960-201ENSMUST00000127027 2667 ntAPPRIS P1 TSL 1 (best) BASIC1.73□□□□□ -2.13
Usf1Q61069 Olfr1448-203ENSMUST00000213713 4336 ntAPPRIS P1 TSL 5 BASIC1.72□□□□□ -2.13
Usf1Q61069 Olfr872-201ENSMUST00000086474 1897 ntAPPRIS P1 TSL 2 BASIC1.72□□□□□ -2.13
Usf1Q61069 Gm23060-201ENSMUST00000102345 109 ntBASIC1.72□□□□□ -2.13
Usf1Q61069 Mir669p-2-201ENSMUST00000103868 87 ntBASIC1.72□□□□□ -2.13
Usf1Q61069 Mir669p-1-201ENSMUST00000103884 87 ntBASIC1.72□□□□□ -2.13
Retrieved 100 of 76,532 protein–RNA pairs in 138.7 ms