Protein–RNA interactions for Protein: Q5R1I8

Trav3-1, T cell receptor alpha variable 3-1 (Fragment), mousemouse

Predictions only

Length 114 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav3-1Q5R1I8 Gm43250-201ENSMUST00000196536 273 ntBASIC0.28□□□□□ -2.36
Trav3-1Q5R1I8 Olfr717-ps1-201ENSMUST00000205589 556 ntBASIC0.28□□□□□ -2.36
Trav3-1Q5R1I8 Defb40-201ENSMUST00000066258 389 ntAPPRIS P1 TSL 1 (best) BASIC0.28□□□□□ -2.36
Trav3-1Q5R1I8 Gm23645-201ENSMUST00000083228 108 ntBASIC0.28□□□□□ -2.36
Trav3-1Q5R1I8 Olfr1466-202ENSMUST00000207124 1981 ntAPPRIS P1 TSL 3 BASIC0.27□□□□□ -2.37
Trav3-1Q5R1I8 Gm13409-201ENSMUST00000122072 546 ntBASIC0.27□□□□□ -2.37
Trav3-1Q5R1I8 Gm22477-201ENSMUST00000122569 316 ntBASIC0.27□□□□□ -2.37
Trav3-1Q5R1I8 Gm23106-201ENSMUST00000157554 101 ntBASIC0.27□□□□□ -2.37
Trav3-1Q5R1I8 Gm26484-201ENSMUST00000158018 106 ntBASIC0.27□□□□□ -2.37
Trav3-1Q5R1I8 Gm23114-201ENSMUST00000158478 117 ntBASIC0.27□□□□□ -2.37
Trav3-1Q5R1I8 Vmn1r-ps150-201ENSMUST00000176659 736 ntBASIC0.27□□□□□ -2.37
Trav3-1Q5R1I8 Gm21094-201ENSMUST00000177842 498 ntTSL 5 BASIC0.27□□□□□ -2.37
Trav3-1Q5R1I8 Gm20837-201ENSMUST00000178446 498 ntTSL 5 BASIC0.27□□□□□ -2.37
Trav3-1Q5R1I8 Gm21739-201ENSMUST00000178639 498 ntTSL 5 BASIC0.27□□□□□ -2.37
Trav3-1Q5R1I8 Gm28891-201ENSMUST00000178751 498 ntTSL 5 BASIC0.27□□□□□ -2.37
Trav3-1Q5R1I8 Gm28490-201ENSMUST00000179076 498 ntTSL 5 BASIC0.27□□□□□ -2.37
Trav3-1Q5R1I8 Gm21861-201ENSMUST00000179480 498 ntTSL 5 BASIC0.27□□□□□ -2.37
Trav3-1Q5R1I8 Gm21256-201ENSMUST00000179672 498 ntTSL 5 BASIC0.27□□□□□ -2.37
Trav3-1Q5R1I8 Gm20838-201ENSMUST00000179884 498 ntTSL 5 BASIC0.27□□□□□ -2.37
Trav3-1Q5R1I8 Gm21679-201ENSMUST00000180373 498 ntAPPRIS P1 TSL 5 BASIC0.27□□□□□ -2.37
Trav3-1Q5R1I8 Gm27545-201ENSMUST00000184755 202 ntBASIC0.27□□□□□ -2.37
Trav3-1Q5R1I8 Gm37081-201ENSMUST00000192034 196 ntBASIC0.27□□□□□ -2.37
Trav3-1Q5R1I8 Gm42533-201ENSMUST00000196247 157 ntBASIC0.27□□□□□ -2.37
Trav3-1Q5R1I8 Gm2829-201ENSMUST00000213121 499 ntBASIC0.27□□□□□ -2.37
Trav3-1Q5R1I8 AC127371.3-201ENSMUST00000228129 415 ntBASIC0.27□□□□□ -2.37
Trav3-1Q5R1I8 AC154692.1-201ENSMUST00000228314 544 ntBASIC0.27□□□□□ -2.37
Trav3-1Q5R1I8 Gm25589-201ENSMUST00000082502 166 ntBASIC0.27□□□□□ -2.37
Trav3-1Q5R1I8 Gm25357-201ENSMUST00000082745 72 ntBASIC0.27□□□□□ -2.37
Trav3-1Q5R1I8 Gm18360-201ENSMUST00000173327 1524 ntBASIC0.27□□□□□ -2.37
Trav3-1Q5R1I8 Mir669d-201ENSMUST00000104644 121 ntBASIC0.26□□□□□ -2.37
Trav3-1Q5R1I8 Gm22482-201ENSMUST00000122563 359 ntBASIC0.26□□□□□ -2.37
Trav3-1Q5R1I8 Gm23196-201ENSMUST00000158806 107 ntBASIC0.26□□□□□ -2.37
Trav3-1Q5R1I8 Gm22392-201ENSMUST00000177971 107 ntBASIC0.26□□□□□ -2.37
Trav3-1Q5R1I8 Gm20874-201ENSMUST00000178356 663 ntBASIC0.26□□□□□ -2.37
Trav3-1Q5R1I8 Esp4-201ENSMUST00000178498 553 ntAPPRIS P1 TSL 1 (best) BASIC0.26□□□□□ -2.37
Trav3-1Q5R1I8 Gm19123-201ENSMUST00000190716 651 ntBASIC0.26□□□□□ -2.37
Trav3-1Q5R1I8 Gm37162-201ENSMUST00000191708 551 ntBASIC0.26□□□□□ -2.37
Trav3-1Q5R1I8 Olfr1315-ps1-202ENSMUST00000208654 945 ntAPPRIS ALT1 BASIC0.26□□□□□ -2.37
Trav3-1Q5R1I8 Gm45296-201ENSMUST00000209625 205 ntBASIC0.26□□□□□ -2.37
Trav3-1Q5R1I8 Gm18703-201ENSMUST00000215318 333 ntBASIC0.26□□□□□ -2.37
Trav3-1Q5R1I8 AC140477.1-201ENSMUST00000222354 246 ntBASIC0.26□□□□□ -2.37
Trav3-1Q5R1I8 Olfr822-201ENSMUST00000080460 942 ntAPPRIS P1 BASIC0.26□□□□□ -2.37
Trav3-1Q5R1I8 DQ267101-201ENSMUST00000082562 73 ntBASIC0.26□□□□□ -2.37
Trav3-1Q5R1I8 Gm24152-201ENSMUST00000082764 163 ntBASIC0.26□□□□□ -2.37
Trav3-1Q5R1I8 Snord118-201ENSMUST00000082965 135 ntBASIC0.26□□□□□ -2.37
Trav3-1Q5R1I8 Gm5581-201ENSMUST00000072940 2550 ntBASIC0.26□□□□□ -2.37
Trav3-1Q5R1I8 Gm43706-201ENSMUST00000198767 2652 ntBASIC0.25□□□□□ -2.37
Trav3-1Q5R1I8 Cylc1-201ENSMUST00000101282 1923 ntAPPRIS P2 TSL 1 (best) BASIC0.25□□□□□ -2.37
Trav3-1Q5R1I8 Mir301b-201ENSMUST00000102333 97 ntBASIC0.25□□□□□ -2.37
Trav3-1Q5R1I8 Mir343-201ENSMUST00000102360 75 ntBASIC0.25□□□□□ -2.37
Trav3-1Q5R1I8 Gm23950-201ENSMUST00000104026 129 ntBASIC0.25□□□□□ -2.37
Trav3-1Q5R1I8 Gm11575-201ENSMUST00000122243 228 ntBASIC0.25□□□□□ -2.37
Trav3-1Q5R1I8 Gm25059-201ENSMUST00000157367 117 ntBASIC0.25□□□□□ -2.37
Trav3-1Q5R1I8 Gm25365-201ENSMUST00000158852 121 ntBASIC0.25□□□□□ -2.37
Trav3-1Q5R1I8 Gm15680-201ENSMUST00000161597 465 ntTSL 5 BASIC0.25□□□□□ -2.37
Trav3-1Q5R1I8 Mir3968-201ENSMUST00000175355 100 ntBASIC0.25□□□□□ -2.37
Trav3-1Q5R1I8 Gm28435-201ENSMUST00000185496 108 ntBASIC0.25□□□□□ -2.37
Trav3-1Q5R1I8 Gm38149-201ENSMUST00000191943 339 ntBASIC0.25□□□□□ -2.37
Trav3-1Q5R1I8 Gm37319-201ENSMUST00000193500 636 ntBASIC0.25□□□□□ -2.37
Trav3-1Q5R1I8 Gm43035-201ENSMUST00000197626 517 ntBASIC0.25□□□□□ -2.37
Trav3-1Q5R1I8 Gm30484-201ENSMUST00000200327 449 ntTSL 5 BASIC0.25□□□□□ -2.37
Trav3-1Q5R1I8 AC156795.1-201ENSMUST00000214655 414 ntBASIC0.25□□□□□ -2.37
Trav3-1Q5R1I8 AC159203.2-201ENSMUST00000221326 193 ntBASIC0.25□□□□□ -2.37
Trav3-1Q5R1I8 AC124196.2-201ENSMUST00000224835 145 ntBASIC0.25□□□□□ -2.37
Trav3-1Q5R1I8 Gm11351-202ENSMUST00000225724 478 ntBASIC0.25□□□□□ -2.37
Trav3-1Q5R1I8 Gm22620-201ENSMUST00000082700 133 ntBASIC0.25□□□□□ -2.37
Trav3-1Q5R1I8 Gm5670-201ENSMUST00000093546 372 ntBASIC0.25□□□□□ -2.37
Trav3-1Q5R1I8 Olfr1496-202ENSMUST00000209137 2394 ntAPPRIS ALT1 TSL 5 BASIC0.25□□□□□ -2.37
Trav3-1Q5R1I8 AC161250.2-201ENSMUST00000215114 3107 ntBASIC0.24□□□□□ -2.37
Trav3-1Q5R1I8 Sycp1-ps1-201ENSMUST00000207882 2768 ntBASIC0.24□□□□□ -2.37
Trav3-1Q5R1I8 Gm43877-201ENSMUST00000205029 2238 ntBASIC0.24□□□□□ -2.37
Trav3-1Q5R1I8 Gm22759-201ENSMUST00000102276 96 ntBASIC0.24□□□□□ -2.37
Trav3-1Q5R1I8 Gm14558-201ENSMUST00000117458 381 ntBASIC0.24□□□□□ -2.37
Trav3-1Q5R1I8 Gm11219-201ENSMUST00000118565 358 ntBASIC0.24□□□□□ -2.37
Trav3-1Q5R1I8 Gm11572-201ENSMUST00000119164 120 ntBASIC0.24□□□□□ -2.37
Trav3-1Q5R1I8 Gm14913-201ENSMUST00000120011 1093 ntBASIC0.24□□□□□ -2.37
Trav3-1Q5R1I8 1700120G11Rik-201ENSMUST00000150273 491 ntTSL 1 (best) BASIC0.24□□□□□ -2.37
Trav3-1Q5R1I8 Gm22796-201ENSMUST00000157234 106 ntBASIC0.24□□□□□ -2.37
Trav3-1Q5R1I8 Gm22227-201ENSMUST00000157356 259 ntBASIC0.24□□□□□ -2.37
Trav3-1Q5R1I8 Rnu7-201ENSMUST00000158458 62 ntBASIC0.24□□□□□ -2.37
Trav3-1Q5R1I8 Mir3061-201ENSMUST00000175129 91 ntBASIC0.24□□□□□ -2.37
Trav3-1Q5R1I8 Gm26979-201ENSMUST00000182971 217 ntTSL 3 BASIC0.24□□□□□ -2.37
Trav3-1Q5R1I8 Gm28214-201ENSMUST00000185663 420 ntTSL 5 BASIC0.24□□□□□ -2.37
Trav3-1Q5R1I8 Gm29648-201ENSMUST00000188651 650 ntTSL 5 BASIC0.24□□□□□ -2.37
Trav3-1Q5R1I8 AC139186.1-201ENSMUST00000197610 94 ntBASIC0.24□□□□□ -2.37
Trav3-1Q5R1I8 Gm43680-201ENSMUST00000199466 340 ntBASIC0.24□□□□□ -2.37
Trav3-1Q5R1I8 Gm44976-201ENSMUST00000205543 261 ntBASIC0.24□□□□□ -2.37
Trav3-1Q5R1I8 Olfr184-ps1-201ENSMUST00000205922 516 ntBASIC0.24□□□□□ -2.37
Trav3-1Q5R1I8 Gm45459-201ENSMUST00000209882 442 ntTSL 5 BASIC0.24□□□□□ -2.37
Trav3-1Q5R1I8 Gm24311-201ENSMUST00000082570 104 ntBASIC0.24□□□□□ -2.37
Trav3-1Q5R1I8 Gm23766-201ENSMUST00000103894 80 ntBASIC0.23□□□□□ -2.37
Trav3-1Q5R1I8 Gm26147-201ENSMUST00000104479 114 ntBASIC0.23□□□□□ -2.37
Trav3-1Q5R1I8 Gm24403-201ENSMUST00000104616 130 ntBASIC0.23□□□□□ -2.37
Trav3-1Q5R1I8 Tas2r122-201ENSMUST00000105077 930 ntAPPRIS P1 BASIC0.23□□□□□ -2.37
Trav3-1Q5R1I8 Gm12512-201ENSMUST00000119620 217 ntBASIC0.23□□□□□ -2.37
Trav3-1Q5R1I8 Gm11862-201ENSMUST00000119678 659 ntBASIC0.23□□□□□ -2.37
Trav3-1Q5R1I8 Gm23390-201ENSMUST00000157393 106 ntBASIC0.23□□□□□ -2.37
Trav3-1Q5R1I8 Gm26152-201ENSMUST00000157427 101 ntBASIC0.23□□□□□ -2.37
Trav3-1Q5R1I8 Gm23586-201ENSMUST00000157657 123 ntBASIC0.23□□□□□ -2.37
Trav3-1Q5R1I8 Gm9944-201ENSMUST00000177649 309 ntAPPRIS P1 BASIC0.23□□□□□ -2.37
Retrieved 100 of 76,532 protein–RNA pairs in 67.1 ms