Protein–RNA interactions for Protein: Q5QNQ9

Col27a1, Collagen alpha-1(XXVII) chain, mousemouse

Predictions only

Length 1,845 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col27a1Q5QNQ9 Olfr606-203ENSMUST00000217250 2313 ntAPPRIS P1 TSL 5 BASIC1.22□□□□□ -2.21
Col27a1Q5QNQ9 Gm23708-201ENSMUST00000104367 123 ntBASIC1.22□□□□□ -2.21
Col27a1Q5QNQ9 Gm23991-201ENSMUST00000117033 93 ntBASIC1.22□□□□□ -2.21
Col27a1Q5QNQ9 Gm12636-201ENSMUST00000117395 624 ntBASIC1.22□□□□□ -2.21
Col27a1Q5QNQ9 Gm13804-201ENSMUST00000119552 172 ntBASIC1.22□□□□□ -2.21
Col27a1Q5QNQ9 Gm15807-201ENSMUST00000119880 1128 ntBASIC1.22□□□□□ -2.21
Col27a1Q5QNQ9 Gm14713-201ENSMUST00000122362 686 ntBASIC1.22□□□□□ -2.21
Col27a1Q5QNQ9 Gm13368-201ENSMUST00000122443 430 ntBASIC1.22□□□□□ -2.21
Col27a1Q5QNQ9 Sly-201ENSMUST00000189109 797 ntAPPRIS ALT2 TSL 1 (best) BASIC1.22□□□□□ -2.21
Col27a1Q5QNQ9 Gm37709-201ENSMUST00000195074 600 ntBASIC1.22□□□□□ -2.21
Col27a1Q5QNQ9 Igkv2-95-1-201ENSMUST00000200279 272 ntBASIC1.22□□□□□ -2.21
Col27a1Q5QNQ9 Gm44052-201ENSMUST00000203382 396 ntBASIC1.22□□□□□ -2.21
Col27a1Q5QNQ9 Olfr822-201ENSMUST00000080460 942 ntAPPRIS P1 BASIC1.22□□□□□ -2.21
Col27a1Q5QNQ9 Gm25404-201ENSMUST00000082970 107 ntBASIC1.22□□□□□ -2.21
Col27a1Q5QNQ9 Olfr987-203ENSMUST00000216347 1453 ntAPPRIS P1 TSL 5 BASIC1.21□□□□□ -2.22
Col27a1Q5QNQ9 Olfr805-203ENSMUST00000216794 3199 ntAPPRIS P1 TSL 5 BASIC1.21□□□□□ -2.22
Col27a1Q5QNQ9 Gm14405-201ENSMUST00000117808 2330 ntBASIC1.21□□□□□ -2.22
Col27a1Q5QNQ9 Traj13-201ENSMUST00000103728 57 ntAPPRIS P1 BASIC1.21□□□□□ -2.22
Col27a1Q5QNQ9 Gm26147-201ENSMUST00000104479 114 ntBASIC1.21□□□□□ -2.22
Col27a1Q5QNQ9 Gm14833-201ENSMUST00000118345 1027 ntBASIC1.21□□□□□ -2.22
Col27a1Q5QNQ9 Ssxb6-201ENSMUST00000138642 518 ntAPPRIS P1 TSL 1 (best) BASIC1.21□□□□□ -2.22
Col27a1Q5QNQ9 Gm16354-201ENSMUST00000155376 150 ntBASIC1.21□□□□□ -2.22
Col27a1Q5QNQ9 Ear10-202ENSMUST00000163652 471 ntAPPRIS P1 BASIC1.21□□□□□ -2.22
Col27a1Q5QNQ9 Gm18416-201ENSMUST00000175635 1003 ntBASIC1.21□□□□□ -2.22
Col27a1Q5QNQ9 Gm26870-201ENSMUST00000181242 1170 ntTSL 5 BASIC1.21□□□□□ -2.22
Col27a1Q5QNQ9 Gm28189-201ENSMUST00000190085 571 ntTSL 3 BASIC1.21□□□□□ -2.22
Col27a1Q5QNQ9 Gm37757-201ENSMUST00000193072 210 ntBASIC1.21□□□□□ -2.22
Col27a1Q5QNQ9 AC164567.2-201ENSMUST00000219363 445 ntBASIC1.21□□□□□ -2.22
Col27a1Q5QNQ9 AC069074.1-201ENSMUST00000220048 381 ntBASIC1.21□□□□□ -2.22
Col27a1Q5QNQ9 Gm34408-201ENSMUST00000222104 655 ntTSL 5 BASIC1.21□□□□□ -2.22
Col27a1Q5QNQ9 CT010506.2-201ENSMUST00000225618 183 ntBASIC1.21□□□□□ -2.22
Col27a1Q5QNQ9 AC170600.1-201ENSMUST00000228763 277 ntBASIC1.21□□□□□ -2.22
Col27a1Q5QNQ9 Olfr835-201ENSMUST00000059315 936 ntAPPRIS P1 BASIC1.21□□□□□ -2.22
Col27a1Q5QNQ9 Olfr1340-201ENSMUST00000094834 951 ntAPPRIS P1 BASIC1.21□□□□□ -2.22
Col27a1Q5QNQ9 Gm14445-201ENSMUST00000117051 1484 ntBASIC1.21□□□□□ -2.22
Col27a1Q5QNQ9 Gm22091-201ENSMUST00000116908 127 ntBASIC1.2□□□□□ -2.22
Col27a1Q5QNQ9 Gm23324-201ENSMUST00000157421 131 ntBASIC1.2□□□□□ -2.22
Col27a1Q5QNQ9 Vmn1r-ps150-201ENSMUST00000176659 736 ntBASIC1.2□□□□□ -2.22
Col27a1Q5QNQ9 Gm18396-201ENSMUST00000177095 361 ntBASIC1.2□□□□□ -2.22
Col27a1Q5QNQ9 Vmn2r-ps34-201ENSMUST00000177433 904 ntBASIC1.2□□□□□ -2.22
Col27a1Q5QNQ9 Gm24464-201ENSMUST00000179697 107 ntBASIC1.2□□□□□ -2.22
Col27a1Q5QNQ9 Gm27028-201ENSMUST00000182303 399 ntBASIC1.2□□□□□ -2.22
Col27a1Q5QNQ9 Mir6540-201ENSMUST00000184886 108 ntBASIC1.2□□□□□ -2.22
Col27a1Q5QNQ9 Gm42739-201ENSMUST00000200687 226 ntBASIC1.2□□□□□ -2.22
Col27a1Q5QNQ9 Gm45387-201ENSMUST00000209792 632 ntBASIC1.2□□□□□ -2.22
Col27a1Q5QNQ9 Olfr848-ps1-201ENSMUST00000212241 930 ntBASIC1.2□□□□□ -2.22
Col27a1Q5QNQ9 AC091260.1-201ENSMUST00000216112 229 ntBASIC1.2□□□□□ -2.22
Col27a1Q5QNQ9 AC188459.1-201ENSMUST00000216651 300 ntBASIC1.2□□□□□ -2.22
Col27a1Q5QNQ9 AC101677.1-201ENSMUST00000218590 158 ntBASIC1.2□□□□□ -2.22
Col27a1Q5QNQ9 AC192616.3-201ENSMUST00000220797 1124 ntBASIC1.2□□□□□ -2.22
Col27a1Q5QNQ9 Gm39473-201ENSMUST00000223498 522 ntTSL 3 BASIC1.2□□□□□ -2.22
Col27a1Q5QNQ9 Vmn1r229-201ENSMUST00000076759 921 ntAPPRIS P1 BASIC1.2□□□□□ -2.22
Col27a1Q5QNQ9 Gm25038-201ENSMUST00000082928 130 ntBASIC1.2□□□□□ -2.22
Col27a1Q5QNQ9 Slco6c1-201ENSMUST00000027569 2747 ntAPPRIS P2 TSL 1 (best) BASIC1.2□□□□□ -2.22
Col27a1Q5QNQ9 Gm10477-201ENSMUST00000101552 165 ntAPPRIS P1 TSL 5 BASIC1.19□□□□□ -2.22
Col27a1Q5QNQ9 Gm15365-201ENSMUST00000122392 300 ntBASIC1.19□□□□□ -2.22
Col27a1Q5QNQ9 Gm23381-201ENSMUST00000157676 94 ntBASIC1.19□□□□□ -2.22
Col27a1Q5QNQ9 Gm24198-201ENSMUST00000157812 108 ntBASIC1.19□□□□□ -2.22
Col27a1Q5QNQ9 Gm22136-201ENSMUST00000158751 268 ntBASIC1.19□□□□□ -2.22
Col27a1Q5QNQ9 Gm22862-201ENSMUST00000178593 121 ntBASIC1.19□□□□□ -2.22
Col27a1Q5QNQ9 Gm24518-201ENSMUST00000180275 94 ntBASIC1.19□□□□□ -2.22
Col27a1Q5QNQ9 Gm27265-201ENSMUST00000183559 77 ntBASIC1.19□□□□□ -2.22
Col27a1Q5QNQ9 Gm28956-201ENSMUST00000189047 427 ntBASIC1.19□□□□□ -2.22
Col27a1Q5QNQ9 Zc3h14-201ENSMUST00000021399 1430 ntTSL 1 (best) BASIC1.19□□□□□ -2.22
Col27a1Q5QNQ9 Gm36989-201ENSMUST00000193225 2160 ntBASIC1.19□□□□□ -2.22
Col27a1Q5QNQ9 Gm24942-201ENSMUST00000158328 114 ntBASIC1.19□□□□□ -2.22
Col27a1Q5QNQ9 Gm25670-201ENSMUST00000178423 107 ntBASIC1.19□□□□□ -2.22
Col27a1Q5QNQ9 Gm26239-201ENSMUST00000178842 107 ntBASIC1.19□□□□□ -2.22
Col27a1Q5QNQ9 Gm6660-201ENSMUST00000179149 468 ntBASIC1.19□□□□□ -2.22
Col27a1Q5QNQ9 Gm26897-201ENSMUST00000180627 93 ntAPPRIS P1 TSL 5 BASIC1.19□□□□□ -2.22
Col27a1Q5QNQ9 Gm28474-201ENSMUST00000188501 315 ntBASIC1.19□□□□□ -2.22
Col27a1Q5QNQ9 Gm37771-201ENSMUST00000193121 265 ntBASIC1.19□□□□□ -2.22
Col27a1Q5QNQ9 Gm33866-201ENSMUST00000196911 289 ntBASIC1.19□□□□□ -2.22
Col27a1Q5QNQ9 Gm44324-201ENSMUST00000198517 135 ntBASIC1.19□□□□□ -2.22
Col27a1Q5QNQ9 Gm42807-201ENSMUST00000200141 329 ntBASIC1.19□□□□□ -2.22
Col27a1Q5QNQ9 Gm34411-201ENSMUST00000201180 280 ntTSL 3 BASIC1.19□□□□□ -2.22
Col27a1Q5QNQ9 Gm44182-201ENSMUST00000204052 115 ntBASIC1.19□□□□□ -2.22
Col27a1Q5QNQ9 Olfr832-202ENSMUST00000218385 4435 ntAPPRIS P1 TSL 5 BASIC1.19□□□□□ -2.22
Col27a1Q5QNQ9 AC114010.1-201ENSMUST00000222060 379 ntBASIC1.19□□□□□ -2.22
Col27a1Q5QNQ9 AC124569.4-201ENSMUST00000223830 1220 ntBASIC1.19□□□□□ -2.22
Col27a1Q5QNQ9 AC117656.1-201ENSMUST00000225826 339 ntBASIC1.19□□□□□ -2.22
Col27a1Q5QNQ9 Gm24292-201ENSMUST00000082888 107 ntBASIC1.19□□□□□ -2.22
Col27a1Q5QNQ9 A630081D01Rik-201ENSMUST00000195842 1833 ntBASIC1.18□□□□□ -2.22
Col27a1Q5QNQ9 n-R5s202-201ENSMUST00000104517 114 ntBASIC1.18□□□□□ -2.22
Col27a1Q5QNQ9 Gm15497-201ENSMUST00000119137 551 ntBASIC1.18□□□□□ -2.22
Col27a1Q5QNQ9 Gm22038-201ENSMUST00000157277 242 ntBASIC1.18□□□□□ -2.22
Col27a1Q5QNQ9 Gm23752-201ENSMUST00000157584 115 ntBASIC1.18□□□□□ -2.22
Col27a1Q5QNQ9 Gm24241-201ENSMUST00000157787 145 ntBASIC1.18□□□□□ -2.22
Col27a1Q5QNQ9 Gm25901-201ENSMUST00000158494 130 ntBASIC1.18□□□□□ -2.22
Col27a1Q5QNQ9 Gm9593-201ENSMUST00000166034 469 ntBASIC1.18□□□□□ -2.22
Col27a1Q5QNQ9 Gm18358-201ENSMUST00000173179 1277 ntBASIC1.18□□□□□ -2.22
Col27a1Q5QNQ9 Gm28917-201ENSMUST00000187294 237 ntBASIC1.18□□□□□ -2.22
Col27a1Q5QNQ9 Gm28766-201ENSMUST00000191086 234 ntBASIC1.18□□□□□ -2.22
Col27a1Q5QNQ9 Rpl18a-ps3-201ENSMUST00000198938 171 ntBASIC1.18□□□□□ -2.22
Col27a1Q5QNQ9 1700030L22Rik-201ENSMUST00000221214 567 ntTSL 5 BASIC1.18□□□□□ -2.22
Col27a1Q5QNQ9 Gm9318-201ENSMUST00000222444 438 ntBASIC1.18□□□□□ -2.22
Col27a1Q5QNQ9 Olfr917-201ENSMUST00000076542 930 ntAPPRIS P1 BASIC1.18□□□□□ -2.22
Col27a1Q5QNQ9 Olfr1466-202ENSMUST00000207124 1981 ntAPPRIS P1 TSL 3 BASIC1.18□□□□□ -2.22
Col27a1Q5QNQ9 Zfp932-207ENSMUST00000187241 1581 ntAPPRIS ALT2 TSL 5 BASIC1.18□□□□□ -2.22
Col27a1Q5QNQ9 Gm11854-201ENSMUST00000117839 446 ntBASIC1.17□□□□□ -2.22
Retrieved 100 of 76,532 protein–RNA pairs in 119.8 ms