Protein–RNA interactions for Protein: Q4QRL3

Ccdc88b, Coiled-coil domain-containing protein 88B, mousemouse

Predictions only

Length 1,481 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc88bQ4QRL3 Gm34411-201ENSMUST00000201180 280 ntTSL 3 BASIC-0.04□□□□□ -2.42
Ccdc88bQ4QRL3 Gm44976-201ENSMUST00000205543 261 ntBASIC-0.04□□□□□ -2.42
Ccdc88bQ4QRL3 Gm45704-201ENSMUST00000212582 403 ntBASIC-0.04□□□□□ -2.42
Ccdc88bQ4QRL3 Olfr941-ps1-201ENSMUST00000215258 935 ntBASIC-0.04□□□□□ -2.42
Ccdc88bQ4QRL3 CT572985.2-201ENSMUST00000220496 211 ntBASIC-0.04□□□□□ -2.42
Ccdc88bQ4QRL3 mt-Nd1-201ENSMUST00000082392 957 ntAPPRIS P1 BASIC-0.04□□□□□ -2.42
Ccdc88bQ4QRL3 Traj45-201ENSMUST00000103697 63 ntAPPRIS P1 BASIC-0.05□□□□□ -2.42
Ccdc88bQ4QRL3 Gm11429-201ENSMUST00000119089 144 ntBASIC-0.05□□□□□ -2.42
Ccdc88bQ4QRL3 AC124196.2-201ENSMUST00000224835 145 ntBASIC-0.05□□□□□ -2.42
Ccdc88bQ4QRL3 Gm14945-201ENSMUST00000119556 1118 ntBASIC-0.06□□□□□ -2.42
Ccdc88bQ4QRL3 Rpl31-ps6-201ENSMUST00000119959 378 ntBASIC-0.06□□□□□ -2.42
Ccdc88bQ4QRL3 Gm15381-201ENSMUST00000121501 1156 ntBASIC-0.06□□□□□ -2.42
Ccdc88bQ4QRL3 Gm20477-201ENSMUST00000174028 280 ntBASIC-0.06□□□□□ -2.42
Ccdc88bQ4QRL3 Gm9944-201ENSMUST00000177649 309 ntAPPRIS P1 BASIC-0.06□□□□□ -2.42
Ccdc88bQ4QRL3 Gm26968-201ENSMUST00000182894 481 ntBASIC-0.06□□□□□ -2.42
Ccdc88bQ4QRL3 1700010I02Rik-202ENSMUST00000188525 430 ntTSL 3 BASIC-0.06□□□□□ -2.42
Ccdc88bQ4QRL3 Gm44403-201ENSMUST00000198554 129 ntBASIC-0.06□□□□□ -2.42
Ccdc88bQ4QRL3 Gm43531-201ENSMUST00000200676 1114 ntBASIC-0.06□□□□□ -2.42
Ccdc88bQ4QRL3 Olfr278-ps1-201ENSMUST00000205676 238 ntBASIC-0.06□□□□□ -2.42
Ccdc88bQ4QRL3 Gm45101-201ENSMUST00000208327 232 ntBASIC-0.06□□□□□ -2.42
Ccdc88bQ4QRL3 Gm44657-201ENSMUST00000208568 450 ntBASIC-0.06□□□□□ -2.42
Ccdc88bQ4QRL3 Gm45455-202ENSMUST00000211156 630 ntTSL 1 (best) BASIC-0.06□□□□□ -2.42
Ccdc88bQ4QRL3 Gm11606-201ENSMUST00000120706 617 ntBASIC-0.07□□□□□ -2.42
Ccdc88bQ4QRL3 Gm14972-201ENSMUST00000121780 364 ntBASIC-0.07□□□□□ -2.42
Ccdc88bQ4QRL3 Gm14363-201ENSMUST00000122304 409 ntBASIC-0.07□□□□□ -2.42
Ccdc88bQ4QRL3 Gm25391-201ENSMUST00000157342 134 ntBASIC-0.07□□□□□ -2.42
Ccdc88bQ4QRL3 Gm20058-201ENSMUST00000186939 284 ntBASIC-0.07□□□□□ -2.42
Ccdc88bQ4QRL3 Tmem167-ps1-201ENSMUST00000191236 214 ntBASIC-0.07□□□□□ -2.42
Ccdc88bQ4QRL3 AC154851.2-201ENSMUST00000222172 644 ntBASIC-0.07□□□□□ -2.42
Ccdc88bQ4QRL3 n-R5s37-201ENSMUST00000082533 118 ntBASIC-0.07□□□□□ -2.42
Ccdc88bQ4QRL3 Gm26326-201ENSMUST00000083070 129 ntBASIC-0.07□□□□□ -2.42
Ccdc88bQ4QRL3 Gm14946-201ENSMUST00000119859 296 ntBASIC-0.08□□□□□ -2.42
Ccdc88bQ4QRL3 Gm25026-201ENSMUST00000175017 188 ntBASIC-0.08□□□□□ -2.42
Ccdc88bQ4QRL3 Gm22995-201ENSMUST00000179670 107 ntBASIC-0.08□□□□□ -2.42
Ccdc88bQ4QRL3 Gm27475-201ENSMUST00000183420 61 ntBASIC-0.08□□□□□ -2.42
Ccdc88bQ4QRL3 Mir7065-201ENSMUST00000185110 61 ntBASIC-0.08□□□□□ -2.42
Ccdc88bQ4QRL3 Gm43035-201ENSMUST00000197626 517 ntBASIC-0.08□□□□□ -2.42
Ccdc88bQ4QRL3 Gm18635-201ENSMUST00000199020 1060 ntBASIC-0.08□□□□□ -2.42
Ccdc88bQ4QRL3 4930543K20Rik-201ENSMUST00000217044 355 ntBASIC-0.08□□□□□ -2.42
Ccdc88bQ4QRL3 Gm24535-201ENSMUST00000083140 107 ntBASIC-0.08□□□□□ -2.42
Ccdc88bQ4QRL3 Mir29c-201ENSMUST00000083614 88 ntBASIC-0.08□□□□□ -2.42
Ccdc88bQ4QRL3 Gm23520-201ENSMUST00000093736 107 ntBASIC-0.08□□□□□ -2.42
Ccdc88bQ4QRL3 Gm11965-201ENSMUST00000122017 277 ntBASIC-0.09□□□□□ -2.42
Ccdc88bQ4QRL3 Gm13324-201ENSMUST00000148607 569 ntTSL 3 BASIC-0.09□□□□□ -2.42
Ccdc88bQ4QRL3 Snora81-201ENSMUST00000157310 178 ntBASIC-0.09□□□□□ -2.42
Ccdc88bQ4QRL3 Gm22983-201ENSMUST00000158308 104 ntBASIC-0.09□□□□□ -2.42
Ccdc88bQ4QRL3 Gm25952-201ENSMUST00000175329 74 ntBASIC-0.09□□□□□ -2.42
Ccdc88bQ4QRL3 Gm44176-201ENSMUST00000204336 276 ntTSL 5 BASIC-0.09□□□□□ -2.42
Ccdc88bQ4QRL3 Gm45387-201ENSMUST00000209792 632 ntBASIC-0.09□□□□□ -2.42
Ccdc88bQ4QRL3 AC158597.1-201ENSMUST00000216234 150 ntBASIC-0.09□□□□□ -2.42
Ccdc88bQ4QRL3 Gm44708-201ENSMUST00000205580 2237 ntBASIC-0.09□□□□□ -2.42
Ccdc88bQ4QRL3 Gm44326-201ENSMUST00000198226 101 ntBASIC-0.1□□□□□ -2.42
Ccdc88bQ4QRL3 Gm44128-201ENSMUST00000204909 219 ntBASIC-0.1□□□□□ -2.42
Ccdc88bQ4QRL3 Gm44607-201ENSMUST00000205611 1090 ntBASIC-0.1□□□□□ -2.42
Ccdc88bQ4QRL3 AC124772.1-201ENSMUST00000221325 151 ntBASIC-0.1□□□□□ -2.42
Ccdc88bQ4QRL3 Gm24091-201ENSMUST00000082550 83 ntBASIC-0.1□□□□□ -2.42
Ccdc88bQ4QRL3 Gm23711-201ENSMUST00000083856 83 ntBASIC-0.1□□□□□ -2.42
Ccdc88bQ4QRL3 Mir672-201ENSMUST00000102331 100 ntBASIC-0.1□□□□□ -2.43
Ccdc88bQ4QRL3 Mir670-201ENSMUST00000102380 100 ntBASIC-0.1□□□□□ -2.43
Ccdc88bQ4QRL3 Gm24086-201ENSMUST00000175171 98 ntBASIC-0.1□□□□□ -2.43
Ccdc88bQ4QRL3 Gm21809-201ENSMUST00000178495 468 ntBASIC-0.1□□□□□ -2.43
Ccdc88bQ4QRL3 Gm28257-201ENSMUST00000185244 463 ntBASIC-0.1□□□□□ -2.43
Ccdc88bQ4QRL3 Gm29389-201ENSMUST00000191562 352 ntBASIC-0.1□□□□□ -2.43
Ccdc88bQ4QRL3 CT030662.3-201ENSMUST00000228751 476 ntBASIC-0.1□□□□□ -2.43
Ccdc88bQ4QRL3 Gm24494-201ENSMUST00000083804 81 ntBASIC-0.1□□□□□ -2.43
Ccdc88bQ4QRL3 AC134917.1-201ENSMUST00000220517 1449 ntBASIC-0.11□□□□□ -2.43
Ccdc88bQ4QRL3 Mir544-201ENSMUST00000103813 78 ntBASIC-0.11□□□□□ -2.43
Ccdc88bQ4QRL3 Gm26011-201ENSMUST00000104410 104 ntBASIC-0.11□□□□□ -2.43
Ccdc88bQ4QRL3 Gm12837-201ENSMUST00000120131 373 ntBASIC-0.11□□□□□ -2.43
Ccdc88bQ4QRL3 Gm25332-201ENSMUST00000158038 105 ntBASIC-0.11□□□□□ -2.43
Ccdc88bQ4QRL3 Gm27313-201ENSMUST00000183500 142 ntBASIC-0.11□□□□□ -2.43
Ccdc88bQ4QRL3 Mir6419-201ENSMUST00000184784 113 ntBASIC-0.11□□□□□ -2.43
Ccdc88bQ4QRL3 Gm28921-201ENSMUST00000190219 378 ntBASIC-0.11□□□□□ -2.43
Ccdc88bQ4QRL3 Gm43007-201ENSMUST00000197618 291 ntBASIC-0.11□□□□□ -2.43
Ccdc88bQ4QRL3 Gm18039-201ENSMUST00000217816 728 ntBASIC-0.11□□□□□ -2.43
Ccdc88bQ4QRL3 AC112935.1-201ENSMUST00000227603 250 ntBASIC-0.11□□□□□ -2.43
Ccdc88bQ4QRL3 Mir429-201ENSMUST00000083493 83 ntBASIC-0.11□□□□□ -2.43
Ccdc88bQ4QRL3 Mir33-201ENSMUST00000083531 69 ntBASIC-0.11□□□□□ -2.43
Ccdc88bQ4QRL3 Traj52-201ENSMUST00000103691 66 ntAPPRIS P1 BASIC-0.12□□□□□ -2.43
Ccdc88bQ4QRL3 Olfr1094-201ENSMUST00000105211 1147 ntAPPRIS P1 BASIC-0.12□□□□□ -2.43
Ccdc88bQ4QRL3 Gm24588-201ENSMUST00000116696 83 ntBASIC-0.12□□□□□ -2.43
Ccdc88bQ4QRL3 Gm14013-201ENSMUST00000119006 270 ntBASIC-0.12□□□□□ -2.43
Ccdc88bQ4QRL3 Gm23983-201ENSMUST00000157142 114 ntBASIC-0.12□□□□□ -2.43
Ccdc88bQ4QRL3 Mir3108-201ENSMUST00000175500 79 ntBASIC-0.12□□□□□ -2.43
Ccdc88bQ4QRL3 Gm20698-201ENSMUST00000175657 233 ntBASIC-0.12□□□□□ -2.43
Ccdc88bQ4QRL3 Vmn1r-ps150-201ENSMUST00000176659 736 ntBASIC-0.12□□□□□ -2.43
Ccdc88bQ4QRL3 Gm5329-201ENSMUST00000186898 463 ntBASIC-0.12□□□□□ -2.43
Ccdc88bQ4QRL3 4930596I21Rik-201ENSMUST00000200494 461 ntTSL 1 (best) BASIC-0.12□□□□□ -2.43
Ccdc88bQ4QRL3 CT009764.1-201ENSMUST00000222260 483 ntBASIC-0.12□□□□□ -2.43
Ccdc88bQ4QRL3 Gm31447-201ENSMUST00000222345 384 ntTSL 3 BASIC-0.12□□□□□ -2.43
Ccdc88bQ4QRL3 Vmn2r-ps82-201ENSMUST00000174222 1641 ntBASIC-0.12□□□□□ -2.43
Ccdc88bQ4QRL3 Gm26328-201ENSMUST00000082821 107 ntBASIC-0.13□□□□□ -2.43
Ccdc88bQ4QRL3 Zfp932-207ENSMUST00000187241 1581 ntAPPRIS ALT2 TSL 5 BASIC-0.13□□□□□ -2.43
Ccdc88bQ4QRL3 Gm1330-202ENSMUST00000109942 555 ntAPPRIS ALT2 TSL 5 BASIC-0.14□□□□□ -2.43
Ccdc88bQ4QRL3 Gm14774-201ENSMUST00000117857 536 ntBASIC-0.14□□□□□ -2.43
Ccdc88bQ4QRL3 Gm25307-201ENSMUST00000158885 106 ntBASIC-0.14□□□□□ -2.43
Ccdc88bQ4QRL3 Gm18588-201ENSMUST00000177308 492 ntBASIC-0.14□□□□□ -2.43
Ccdc88bQ4QRL3 Gm21744-201ENSMUST00000178403 662 ntBASIC-0.14□□□□□ -2.43
Ccdc88bQ4QRL3 Mir6346-201ENSMUST00000183982 81 ntBASIC-0.14□□□□□ -2.43
Ccdc88bQ4QRL3 Gm45912-201ENSMUST00000210646 543 ntBASIC-0.14□□□□□ -2.43
Retrieved 100 of 76,532 protein–RNA pairs in 75.6 ms