Protein–RNA interactions for Protein: Q3UWA4

Trim40, Tripartite motif-containing protein 40, mousemouse

Predictions only

Length 246 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim40Q3UWA4 Gm38361-201ENSMUST00000193419 458 ntTSL 5 BASIC2.14□□□□□ -2.07
Trim40Q3UWA4 Ighv2-8-201ENSMUST00000193935 262 ntBASIC2.14□□□□□ -2.07
Trim40Q3UWA4 Mir3068-202ENSMUST00000197755 79 ntBASIC2.14□□□□□ -2.07
Trim40Q3UWA4 Gm45119-201ENSMUST00000207612 199 ntBASIC2.14□□□□□ -2.07
Trim40Q3UWA4 Gm45704-201ENSMUST00000212582 403 ntBASIC2.14□□□□□ -2.07
Trim40Q3UWA4 AL603630.1-201ENSMUST00000214781 147 ntBASIC2.14□□□□□ -2.07
Trim40Q3UWA4 D730003K21Rik-201ENSMUST00000215052 589 ntTSL 2 BASIC2.14□□□□□ -2.07
Trim40Q3UWA4 1700030L22Rik-201ENSMUST00000221214 567 ntTSL 5 BASIC2.14□□□□□ -2.07
Trim40Q3UWA4 AC130821.1-201ENSMUST00000221997 293 ntBASIC2.14□□□□□ -2.07
Trim40Q3UWA4 AC154521.1-201ENSMUST00000222635 330 ntBASIC2.14□□□□□ -2.07
Trim40Q3UWA4 AC164297.3-201ENSMUST00000224238 94 ntBASIC2.14□□□□□ -2.07
Trim40Q3UWA4 AC123533.1-201ENSMUST00000227782 446 ntBASIC2.14□□□□□ -2.07
Trim40Q3UWA4 Olfr1437-202ENSMUST00000207241 3751 ntAPPRIS P1 TSL 2 BASIC2.13□□□□□ -2.07
Trim40Q3UWA4 Olfr347-202ENSMUST00000216882 3385 ntAPPRIS P1 TSL 5 BASIC2.13□□□□□ -2.07
Trim40Q3UWA4 2610300M13Rik-202ENSMUST00000203716 1787 ntTSL 1 (best) BASIC2.13□□□□□ -2.07
Trim40Q3UWA4 Mir701-201ENSMUST00000102208 109 ntBASIC2.13□□□□□ -2.07
Trim40Q3UWA4 Mir466k-201ENSMUST00000116774 122 ntBASIC2.13□□□□□ -2.07
Trim40Q3UWA4 Gm13378-201ENSMUST00000117483 336 ntBASIC2.13□□□□□ -2.07
Trim40Q3UWA4 Gm15844-201ENSMUST00000118016 576 ntBASIC2.13□□□□□ -2.07
Trim40Q3UWA4 Gm14748-201ENSMUST00000119819 411 ntBASIC2.13□□□□□ -2.07
Trim40Q3UWA4 Gm14770-201ENSMUST00000122197 312 ntBASIC2.13□□□□□ -2.07
Trim40Q3UWA4 Olfr719-ps-201ENSMUST00000137795 252 ntBASIC2.13□□□□□ -2.07
Trim40Q3UWA4 Gm22037-201ENSMUST00000157280 296 ntBASIC2.13□□□□□ -2.07
Trim40Q3UWA4 Gm25384-201ENSMUST00000157807 105 ntBASIC2.13□□□□□ -2.07
Trim40Q3UWA4 Gm24958-201ENSMUST00000158009 97 ntBASIC2.13□□□□□ -2.07
Trim40Q3UWA4 Gm16561-201ENSMUST00000163001 192 ntBASIC2.13□□□□□ -2.07
Trim40Q3UWA4 Gm43578-201ENSMUST00000201250 459 ntBASIC2.13□□□□□ -2.07
Trim40Q3UWA4 Gm26066-201ENSMUST00000083385 109 ntBASIC2.13□□□□□ -2.07
Trim40Q3UWA4 Gm23040-201ENSMUST00000083869 163 ntBASIC2.13□□□□□ -2.07
Trim40Q3UWA4 Gm44578-201ENSMUST00000207236 3835 ntBASIC2.13□□□□□ -2.07
Trim40Q3UWA4 Gm38388-201ENSMUST00000195569 1430 ntBASIC2.12□□□□□ -2.07
Trim40Q3UWA4 Gm3081-201ENSMUST00000193413 3025 ntBASIC2.12□□□□□ -2.07
Trim40Q3UWA4 Gm23202-201ENSMUST00000104376 129 ntBASIC2.12□□□□□ -2.07
Trim40Q3UWA4 Gm22497-201ENSMUST00000104499 131 ntBASIC2.12□□□□□ -2.07
Trim40Q3UWA4 Gm12550-201ENSMUST00000118478 329 ntBASIC2.12□□□□□ -2.07
Trim40Q3UWA4 Gm12897-201ENSMUST00000120341 250 ntBASIC2.12□□□□□ -2.07
Trim40Q3UWA4 Gm14574-201ENSMUST00000120644 279 ntBASIC2.12□□□□□ -2.07
Trim40Q3UWA4 Gm14845-201ENSMUST00000121259 306 ntBASIC2.12□□□□□ -2.07
Trim40Q3UWA4 Gm12443-201ENSMUST00000122308 323 ntBASIC2.12□□□□□ -2.07
Trim40Q3UWA4 Gm22073-201ENSMUST00000122668 189 ntBASIC2.12□□□□□ -2.07
Trim40Q3UWA4 Scml1-201ENSMUST00000136860 576 ntTSL 3 BASIC2.12□□□□□ -2.07
Trim40Q3UWA4 Gm12510-201ENSMUST00000152190 362 ntTSL 5 BASIC2.12□□□□□ -2.07
Trim40Q3UWA4 Gm27926-201ENSMUST00000157180 66 ntBASIC2.12□□□□□ -2.07
Trim40Q3UWA4 Gm27396-201ENSMUST00000157708 58 ntBASIC2.12□□□□□ -2.07
Trim40Q3UWA4 Gm22654-201ENSMUST00000157874 105 ntBASIC2.12□□□□□ -2.07
Trim40Q3UWA4 Gm25224-201ENSMUST00000158195 68 ntBASIC2.12□□□□□ -2.07
Trim40Q3UWA4 Gm22836-201ENSMUST00000158441 61 ntBASIC2.12□□□□□ -2.07
Trim40Q3UWA4 Gm16004-201ENSMUST00000161981 311 ntTSL 5 BASIC2.12□□□□□ -2.07
Trim40Q3UWA4 Gm7953-201ENSMUST00000168278 469 ntBASIC2.12□□□□□ -2.07
Trim40Q3UWA4 Vmn2r-ps55-201ENSMUST00000173834 240 ntBASIC2.12□□□□□ -2.07
Trim40Q3UWA4 Gm24085-201ENSMUST00000175172 116 ntBASIC2.12□□□□□ -2.07
Trim40Q3UWA4 Obox3-ps7-201ENSMUST00000176465 410 ntBASIC2.12□□□□□ -2.07
Trim40Q3UWA4 Mir7658-201ENSMUST00000184043 57 ntBASIC2.12□□□□□ -2.07
Trim40Q3UWA4 1700029M03Rik-201ENSMUST00000187300 444 ntTSL 1 (best) BASIC2.12□□□□□ -2.07
Trim40Q3UWA4 Scgb1b1-ps-201ENSMUST00000189264 268 ntBASIC2.12□□□□□ -2.07
Trim40Q3UWA4 Gm37923-201ENSMUST00000191624 161 ntBASIC2.12□□□□□ -2.07
Trim40Q3UWA4 Gm34302-201ENSMUST00000192926 243 ntAPPRIS P1 TSL 5 BASIC2.12□□□□□ -2.07
Trim40Q3UWA4 Gm43238-201ENSMUST00000196463 359 ntBASIC2.12□□□□□ -2.07
Trim40Q3UWA4 Olfr6-204ENSMUST00000219365 951 ntAPPRIS P1 BASIC2.12□□□□□ -2.07
Trim40Q3UWA4 Gm23404-201ENSMUST00000082543 97 ntBASIC2.12□□□□□ -2.07
Trim40Q3UWA4 Gm26164-201ENSMUST00000083793 104 ntBASIC2.12□□□□□ -2.07
Trim40Q3UWA4 Olfr681-203ENSMUST00000215517 4324 ntAPPRIS P1 TSL 5 BASIC2.12□□□□□ -2.07
Trim40Q3UWA4 Zfp160-201ENSMUST00000088811 3791 ntAPPRIS P1 TSL 1 (best) BASIC2.12□□□□□ -2.07
Trim40Q3UWA4 Vmn1r67-202ENSMUST00000226237 2352 ntAPPRIS ALT2 BASIC2.12□□□□□ -2.07
Trim40Q3UWA4 Gm45393-201ENSMUST00000211634 2631 ntBASIC2.11□□□□□ -2.07
Trim40Q3UWA4 Crisp1-201ENSMUST00000026498 1416 ntAPPRIS P1 TSL 1 (best) BASIC2.11□□□□□ -2.07
Trim40Q3UWA4 Mir669o-201ENSMUST00000103898 96 ntBASIC2.11□□□□□ -2.07
Trim40Q3UWA4 Cypt15-201ENSMUST00000115114 519 ntAPPRIS P1 TSL 1 (best) BASIC2.11□□□□□ -2.07
Trim40Q3UWA4 Gm14894-201ENSMUST00000117170 270 ntBASIC2.11□□□□□ -2.07
Trim40Q3UWA4 Gm14670-201ENSMUST00000117327 337 ntBASIC2.11□□□□□ -2.07
Trim40Q3UWA4 Gm12412-201ENSMUST00000121867 328 ntBASIC2.11□□□□□ -2.07
Trim40Q3UWA4 Gm14402-201ENSMUST00000122217 508 ntBASIC2.11□□□□□ -2.07
Trim40Q3UWA4 Gm11834-201ENSMUST00000122257 585 ntBASIC2.11□□□□□ -2.07
Trim40Q3UWA4 4930518C09Rik-201ENSMUST00000172700 478 ntTSL 1 (best) BASIC2.11□□□□□ -2.07
Trim40Q3UWA4 Gm29604-201ENSMUST00000187176 163 ntBASIC2.11□□□□□ -2.07
Trim40Q3UWA4 Gm37449-201ENSMUST00000193016 270 ntBASIC2.11□□□□□ -2.07
Trim40Q3UWA4 Gm18658-201ENSMUST00000195558 270 ntBASIC2.11□□□□□ -2.07
Trim40Q3UWA4 Trav15n-3-201ENSMUST00000200498 168 ntBASIC2.11□□□□□ -2.07
Trim40Q3UWA4 Gm44161-201ENSMUST00000203532 253 ntBASIC2.11□□□□□ -2.07
Trim40Q3UWA4 Gm5023-201ENSMUST00000217442 587 ntBASIC2.11□□□□□ -2.07
Trim40Q3UWA4 CAAA01090905.1-201ENSMUST00000219056 426 ntTSL 2 BASIC2.11□□□□□ -2.07
Trim40Q3UWA4 AC158606.1-201ENSMUST00000220078 325 ntBASIC2.11□□□□□ -2.07
Trim40Q3UWA4 Gm33654-201ENSMUST00000221704 215 ntBASIC2.11□□□□□ -2.07
Trim40Q3UWA4 Gm21937-201ENSMUST00000222825 218 ntBASIC2.11□□□□□ -2.07
Trim40Q3UWA4 Mir93-201ENSMUST00000083593 88 ntBASIC2.11□□□□□ -2.07
Trim40Q3UWA4 Gm15314-201ENSMUST00000120740 1887 ntBASIC2.11□□□□□ -2.07
Trim40Q3UWA4 Ifi203-209ENSMUST00000156895 3605 ntAPPRIS ALT2 TSL 1 (best) BASIC2.11□□□□□ -2.07
Trim40Q3UWA4 Knl1-202ENSMUST00000028802 7800 ntAPPRIS P1 TSL 5 BASIC2.11□□□□□ -2.07
Trim40Q3UWA4 Gpr174-207ENSMUST00000178838 4955 ntAPPRIS P1 TSL 2 BASIC2.1□□□□□ -2.07
Trim40Q3UWA4 Olfr1102-202ENSMUST00000214002 1806 ntAPPRIS P1 TSL 5 BASIC2.1□□□□□ -2.07
Trim40Q3UWA4 Gm42801-201ENSMUST00000202562 2865 ntBASIC2.1□□□□□ -2.07
Trim40Q3UWA4 Gm24338-201ENSMUST00000104205 127 ntBASIC2.1□□□□□ -2.07
Trim40Q3UWA4 Rps15a-ps6-201ENSMUST00000117476 393 ntBASIC2.1□□□□□ -2.07
Trim40Q3UWA4 Gm13756-201ENSMUST00000117618 222 ntBASIC2.1□□□□□ -2.07
Trim40Q3UWA4 Gm14821-201ENSMUST00000121975 435 ntBASIC2.1□□□□□ -2.07
Trim40Q3UWA4 4930527E20Rik-201ENSMUST00000135700 351 ntTSL 1 (best) BASIC2.1□□□□□ -2.07
Trim40Q3UWA4 Gm13200-201ENSMUST00000138802 258 ntTSL 3 BASIC2.1□□□□□ -2.07
Trim40Q3UWA4 Gm23331-201ENSMUST00000157423 108 ntBASIC2.1□□□□□ -2.07
Trim40Q3UWA4 Gm25982-201ENSMUST00000157920 101 ntBASIC2.1□□□□□ -2.07
Trim40Q3UWA4 Gm25454-201ENSMUST00000157947 315 ntBASIC2.1□□□□□ -2.07
Retrieved 100 of 76,532 protein–RNA pairs in 89 ms