Protein–RNA interactions for Protein: Q3ULJ3

Upf3a, MCG3697, isoform CRA_c, mousemouse

Predictions only

Length 422 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Upf3aQ3ULJ3 Trav15d-3-201ENSMUST00000198604 167 ntBASIC1.85□□□□□ -2.11
Upf3aQ3ULJ3 Gm43529-201ENSMUST00000199178 412 ntBASIC1.85□□□□□ -2.11
Upf3aQ3ULJ3 Trav15n-3-201ENSMUST00000200498 168 ntBASIC1.85□□□□□ -2.11
Upf3aQ3ULJ3 Gm44182-201ENSMUST00000204052 115 ntBASIC1.85□□□□□ -2.11
Upf3aQ3ULJ3 4930431P19Rik-201ENSMUST00000207570 451 ntBASIC1.85□□□□□ -2.11
Upf3aQ3ULJ3 AC135292.1-201ENSMUST00000227665 204 ntBASIC1.85□□□□□ -2.11
Upf3aQ3ULJ3 Gm25698-201ENSMUST00000082897 107 ntBASIC1.85□□□□□ -2.11
Upf3aQ3ULJ3 Mir300-201ENSMUST00000083485 79 ntBASIC1.85□□□□□ -2.11
Upf3aQ3ULJ3 Btf3l4-201ENSMUST00000102739 723 ntAPPRIS P1 TSL 3 BASIC1.84□□□□□ -2.11
Upf3aQ3ULJ3 Gm23184-201ENSMUST00000122594 131 ntBASIC1.84□□□□□ -2.11
Upf3aQ3ULJ3 2210417A02Rik-201ENSMUST00000150265 550 ntTSL 1 (best) BASIC1.84□□□□□ -2.11
Upf3aQ3ULJ3 Snord11-201ENSMUST00000158468 84 ntBASIC1.84□□□□□ -2.11
Upf3aQ3ULJ3 Gm29231-201ENSMUST00000179850 319 ntBASIC1.84□□□□□ -2.11
Upf3aQ3ULJ3 Gm21729-201ENSMUST00000180058 664 ntBASIC1.84□□□□□ -2.11
Upf3aQ3ULJ3 Gm21853-201ENSMUST00000180071 664 ntBASIC1.84□□□□□ -2.11
Upf3aQ3ULJ3 Mir6995-201ENSMUST00000183658 71 ntBASIC1.84□□□□□ -2.11
Upf3aQ3ULJ3 Mir6950-201ENSMUST00000184438 73 ntBASIC1.84□□□□□ -2.11
Upf3aQ3ULJ3 Gm29495-201ENSMUST00000189319 664 ntBASIC1.84□□□□□ -2.11
Upf3aQ3ULJ3 Gm31123-201ENSMUST00000192094 666 ntBASIC1.84□□□□□ -2.11
Upf3aQ3ULJ3 Olfr778-ps1-201ENSMUST00000204517 207 ntBASIC1.84□□□□□ -2.11
Upf3aQ3ULJ3 Gm43865-201ENSMUST00000204721 127 ntBASIC1.84□□□□□ -2.11
Upf3aQ3ULJ3 Gm45386-201ENSMUST00000210194 218 ntBASIC1.84□□□□□ -2.11
Upf3aQ3ULJ3 AC120394.1-201ENSMUST00000217153 351 ntBASIC1.84□□□□□ -2.11
Upf3aQ3ULJ3 AC116589.1-201ENSMUST00000220634 327 ntBASIC1.84□□□□□ -2.11
Upf3aQ3ULJ3 Selenok-ps5-201ENSMUST00000221048 278 ntBASIC1.84□□□□□ -2.11
Upf3aQ3ULJ3 CT010480.5-201ENSMUST00000225026 217 ntBASIC1.84□□□□□ -2.11
Upf3aQ3ULJ3 AC117656.1-201ENSMUST00000225826 339 ntBASIC1.84□□□□□ -2.11
Upf3aQ3ULJ3 AC110380.1-201ENSMUST00000226987 389 ntBASIC1.84□□□□□ -2.11
Upf3aQ3ULJ3 Mir301-201ENSMUST00000083655 86 ntBASIC1.84□□□□□ -2.11
Upf3aQ3ULJ3 AC117226.1-201ENSMUST00000221635 3737 ntBASIC1.83□□□□□ -2.12
Upf3aQ3ULJ3 Olfr385-202ENSMUST00000215689 1671 ntAPPRIS P1 TSL 5 BASIC1.83□□□□□ -2.12
Upf3aQ3ULJ3 Zc3h14-201ENSMUST00000021399 1430 ntTSL 1 (best) BASIC1.83□□□□□ -2.12
Upf3aQ3ULJ3 Ighv3-6-201ENSMUST00000103481 342 ntAPPRIS ALT2 BASIC1.83□□□□□ -2.12
Upf3aQ3ULJ3 Gm25090-201ENSMUST00000104000 132 ntBASIC1.83□□□□□ -2.12
Upf3aQ3ULJ3 Gm26080-201ENSMUST00000104069 131 ntBASIC1.83□□□□□ -2.12
Upf3aQ3ULJ3 Gm26396-201ENSMUST00000104093 132 ntBASIC1.83□□□□□ -2.12
Upf3aQ3ULJ3 Gm24984-201ENSMUST00000104454 133 ntBASIC1.83□□□□□ -2.12
Upf3aQ3ULJ3 Gm14551-201ENSMUST00000120802 256 ntBASIC1.83□□□□□ -2.12
Upf3aQ3ULJ3 Gm12872-201ENSMUST00000121835 320 ntBASIC1.83□□□□□ -2.12
Upf3aQ3ULJ3 Gm24551-201ENSMUST00000158645 92 ntBASIC1.83□□□□□ -2.12
Upf3aQ3ULJ3 Ear-ps8-201ENSMUST00000161935 354 ntBASIC1.83□□□□□ -2.12
Upf3aQ3ULJ3 Gm18433-201ENSMUST00000192747 197 ntBASIC1.83□□□□□ -2.12
Upf3aQ3ULJ3 Olfr192-203ENSMUST00000206214 1054 ntAPPRIS P1 TSL 5 BASIC1.83□□□□□ -2.12
Upf3aQ3ULJ3 Gm44825-201ENSMUST00000207557 150 ntBASIC1.83□□□□□ -2.12
Upf3aQ3ULJ3 Gm44598-201ENSMUST00000207566 150 ntBASIC1.83□□□□□ -2.12
Upf3aQ3ULJ3 Gm31294-201ENSMUST00000211216 138 ntTSL 5 BASIC1.83□□□□□ -2.12
Upf3aQ3ULJ3 Mir410-201ENSMUST00000083563 81 ntBASIC1.83□□□□□ -2.12
Upf3aQ3ULJ3 Gm22577-201ENSMUST00000083731 109 ntBASIC1.83□□□□□ -2.12
Upf3aQ3ULJ3 Gm37661-201ENSMUST00000191863 1550 ntBASIC1.83□□□□□ -2.12
Upf3aQ3ULJ3 Gm42635-201ENSMUST00000200266 2571 ntBASIC1.83□□□□□ -2.12
Upf3aQ3ULJ3 Gm11522-201ENSMUST00000120533 176 ntBASIC1.82□□□□□ -2.12
Upf3aQ3ULJ3 Gm12926-201ENSMUST00000121158 409 ntBASIC1.82□□□□□ -2.12
Upf3aQ3ULJ3 Gm25325-201ENSMUST00000122559 86 ntBASIC1.82□□□□□ -2.12
Upf3aQ3ULJ3 Gm22199-201ENSMUST00000122660 126 ntBASIC1.82□□□□□ -2.12
Upf3aQ3ULJ3 Gm15692-201ENSMUST00000152173 352 ntBASIC1.82□□□□□ -2.12
Upf3aQ3ULJ3 Gm23000-201ENSMUST00000157083 139 ntBASIC1.82□□□□□ -2.12
Upf3aQ3ULJ3 Gm17161-201ENSMUST00000169187 524 ntBASIC1.82□□□□□ -2.12
Upf3aQ3ULJ3 Gm24862-201ENSMUST00000179103 79 ntBASIC1.82□□□□□ -2.12
Upf3aQ3ULJ3 Gm23310-201ENSMUST00000179105 79 ntBASIC1.82□□□□□ -2.12
Upf3aQ3ULJ3 Gm25461-201ENSMUST00000179293 79 ntBASIC1.82□□□□□ -2.12
Upf3aQ3ULJ3 Gm27385-201ENSMUST00000184747 104 ntBASIC1.82□□□□□ -2.12
Upf3aQ3ULJ3 Gm27544-201ENSMUST00000185069 155 ntBASIC1.82□□□□□ -2.12
Upf3aQ3ULJ3 Gm29350-201ENSMUST00000189141 541 ntBASIC1.82□□□□□ -2.12
Upf3aQ3ULJ3 Gm44870-201ENSMUST00000207291 357 ntBASIC1.82□□□□□ -2.12
Upf3aQ3ULJ3 Gm18854-201ENSMUST00000211196 329 ntBASIC1.82□□□□□ -2.12
Upf3aQ3ULJ3 AC130222.1-201ENSMUST00000221198 256 ntBASIC1.82□□□□□ -2.12
Upf3aQ3ULJ3 Gm10192-201ENSMUST00000086672 327 ntAPPRIS P1 BASIC1.82□□□□□ -2.12
Upf3aQ3ULJ3 Olfr1018-202ENSMUST00000214416 3186 ntAPPRIS P1 TSL 5 BASIC1.82□□□□□ -2.12
Upf3aQ3ULJ3 Gpr174-204ENSMUST00000120971 3588 ntAPPRIS P1 TSL 1 (best) BASIC1.82□□□□□ -2.12
Upf3aQ3ULJ3 Zfp600-201ENSMUST00000092750 4154 ntAPPRIS P1 TSL 1 (best) BASIC1.82□□□□□ -2.12
Upf3aQ3ULJ3 Gm15088-201ENSMUST00000117973 1508 ntBASIC1.81□□□□□ -2.12
Upf3aQ3ULJ3 Gm15098-201ENSMUST00000119036 1508 ntBASIC1.81□□□□□ -2.12
Upf3aQ3ULJ3 AC153966.1-201ENSMUST00000220106 3764 ntBASIC1.81□□□□□ -2.12
Upf3aQ3ULJ3 Gm22834-201ENSMUST00000102021 79 ntBASIC1.81□□□□□ -2.12
Upf3aQ3ULJ3 Gm24582-201ENSMUST00000103967 103 ntBASIC1.81□□□□□ -2.12
Upf3aQ3ULJ3 Gm22389-201ENSMUST00000158193 301 ntBASIC1.81□□□□□ -2.12
Upf3aQ3ULJ3 Gm25658-201ENSMUST00000158472 128 ntBASIC1.81□□□□□ -2.12
Upf3aQ3ULJ3 Gm26004-201ENSMUST00000158804 116 ntBASIC1.81□□□□□ -2.12
Upf3aQ3ULJ3 Lce6a-202ENSMUST00000170676 485 ntAPPRIS P1 TSL 1 (best) BASIC1.81□□□□□ -2.12
Upf3aQ3ULJ3 Gm23714-201ENSMUST00000179259 105 ntBASIC1.81□□□□□ -2.12
Upf3aQ3ULJ3 C920009B18Rik-204ENSMUST00000181733 123 ntBASIC1.81□□□□□ -2.12
Upf3aQ3ULJ3 Gm27722-201ENSMUST00000183908 76 ntBASIC1.81□□□□□ -2.12
Upf3aQ3ULJ3 Sult2a6-202ENSMUST00000184731 664 ntTSL 1 (best) BASIC1.81□□□□□ -2.12
Upf3aQ3ULJ3 Gm42672-201ENSMUST00000197821 352 ntBASIC1.81□□□□□ -2.12
Upf3aQ3ULJ3 Gm44336-201ENSMUST00000203696 468 ntBASIC1.81□□□□□ -2.12
Upf3aQ3ULJ3 Olfr1482-ps1-201ENSMUST00000207181 178 ntBASIC1.81□□□□□ -2.12
Upf3aQ3ULJ3 Sval3-201ENSMUST00000080742 550 ntAPPRIS P1 TSL 1 (best) BASIC1.81□□□□□ -2.12
Upf3aQ3ULJ3 Gm25475-201ENSMUST00000082825 180 ntBASIC1.81□□□□□ -2.12
Upf3aQ3ULJ3 Mir743b-201ENSMUST00000104751 77 ntBASIC1.8□□□□□ -2.12
Upf3aQ3ULJ3 Gm14882-201ENSMUST00000117216 218 ntBASIC1.8□□□□□ -2.12
Upf3aQ3ULJ3 Gm14364-201ENSMUST00000129209 267 ntBASIC1.8□□□□□ -2.12
Upf3aQ3ULJ3 Gm23586-201ENSMUST00000157657 123 ntBASIC1.8□□□□□ -2.12
Upf3aQ3ULJ3 Gm25711-201ENSMUST00000158633 128 ntBASIC1.8□□□□□ -2.12
Upf3aQ3ULJ3 Gm26335-201ENSMUST00000178449 107 ntBASIC1.8□□□□□ -2.12
Upf3aQ3ULJ3 Gm10719-203ENSMUST00000179272 675 ntAPPRIS ALT2 TSL 5 BASIC1.8□□□□□ -2.12
Upf3aQ3ULJ3 Gm27236-201ENSMUST00000184147 442 ntBASIC1.8□□□□□ -2.12
Upf3aQ3ULJ3 Gm28794-201ENSMUST00000185276 136 ntBASIC1.8□□□□□ -2.12
Upf3aQ3ULJ3 Mir691-201ENSMUST00000199719 78 ntBASIC1.8□□□□□ -2.12
Upf3aQ3ULJ3 Gm5001-201ENSMUST00000204361 331 ntBASIC1.8□□□□□ -2.12
Upf3aQ3ULJ3 Gm18696-201ENSMUST00000220103 274 ntBASIC1.8□□□□□ -2.12
Retrieved 100 of 76,532 protein–RNA pairs in 107.6 ms