Protein–RNA interactions for Protein: Q3UH68

Limch1, LIM and calponin homology domains-containing protein 1, mousemouse

Predictions only

Length 1,057 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Limch1Q3UH68 Gm14416-201ENSMUST00000118630 2308 ntBASIC4.12□□□□□ -1.75
Limch1Q3UH68 Themis-201ENSMUST00000056097 5082 ntAPPRIS P2 TSL 1 (best) BASIC4.12□□□□□ -1.75
Limch1Q3UH68 CT010444.1-201ENSMUST00000219963 3845 ntBASIC4.11□□□□□ -1.75
Limch1Q3UH68 Gm37494-202ENSMUST00000188038 16021 ntTSL 5 BASIC4.11□□□□□ -1.75
Limch1Q3UH68 Gm36960-201ENSMUST00000195491 2035 ntBASIC4.11□□□□□ -1.75
Limch1Q3UH68 Gm25269-201ENSMUST00000122601 104 ntBASIC4.11□□□□□ -1.75
Limch1Q3UH68 Gm23755-201ENSMUST00000157578 343 ntBASIC4.11□□□□□ -1.75
Limch1Q3UH68 Gm22097-201ENSMUST00000157929 278 ntBASIC4.11□□□□□ -1.75
Limch1Q3UH68 Gm17218-201ENSMUST00000165911 410 ntTSL 3 BASIC4.11□□□□□ -1.75
Limch1Q3UH68 Gm38171-201ENSMUST00000195716 478 ntTSL 3 BASIC4.11□□□□□ -1.75
Limch1Q3UH68 Gm44703-201ENSMUST00000205724 248 ntBASIC4.11□□□□□ -1.75
Limch1Q3UH68 Gm45013-201ENSMUST00000206883 178 ntBASIC4.11□□□□□ -1.75
Limch1Q3UH68 Olfr880-ps1-201ENSMUST00000212344 229 ntBASIC4.11□□□□□ -1.75
Limch1Q3UH68 Gm22828-201ENSMUST00000083768 107 ntBASIC4.11□□□□□ -1.75
Limch1Q3UH68 Pik3ca-201ENSMUST00000029201 8917 ntAPPRIS P1 TSL 1 (best) BASIC4.11□□□□□ -1.75
Limch1Q3UH68 Gm37298-201ENSMUST00000193770 3868 ntBASIC4.1□□□□□ -1.75
Limch1Q3UH68 Olfr986-203ENSMUST00000216720 3381 ntAPPRIS P1 TSL 5 BASIC4.1□□□□□ -1.75
Limch1Q3UH68 Olfr105-ps-202ENSMUST00000215518 3778 ntAPPRIS P1 TSL 5 BASIC4.1□□□□□ -1.75
Limch1Q3UH68 Gm25494-201ENSMUST00000158143 100 ntBASIC4.1□□□□□ -1.75
Limch1Q3UH68 Gm24131-201ENSMUST00000158539 107 ntBASIC4.1□□□□□ -1.75
Limch1Q3UH68 AC161054.1-201ENSMUST00000214319 184 ntBASIC4.1□□□□□ -1.75
Limch1Q3UH68 Gm18015-201ENSMUST00000214879 316 ntBASIC4.1□□□□□ -1.75
Limch1Q3UH68 CT030161.1-201ENSMUST00000218411 124 ntBASIC4.1□□□□□ -1.75
Limch1Q3UH68 Mir26a-1-201ENSMUST00000083579 90 ntBASIC4.1□□□□□ -1.75
Limch1Q3UH68 Gm24164-201ENSMUST00000093663 104 ntBASIC4.1□□□□□ -1.75
Limch1Q3UH68 Gm9911-201ENSMUST00000211467 2802 ntBASIC4.1□□□□□ -1.75
Limch1Q3UH68 Olfr1216-202ENSMUST00000216000 3595 ntAPPRIS P1 TSL 5 BASIC4.1□□□□□ -1.75
Limch1Q3UH68 Olfr657-203ENSMUST00000215454 2397 ntAPPRIS P1 TSL 5 BASIC4.1□□□□□ -1.75
Limch1Q3UH68 Olfr112-201ENSMUST00000085548 3103 ntAPPRIS P1 TSL 5 BASIC4.09□□□□□ -1.75
Limch1Q3UH68 Traj56-201ENSMUST00000103689 63 ntAPPRIS P1 BASIC4.09□□□□□ -1.75
Limch1Q3UH68 Gm26145-201ENSMUST00000104476 127 ntBASIC4.09□□□□□ -1.75
Limch1Q3UH68 Gm3443-201ENSMUST00000112772 285 ntAPPRIS P1 TSL 3 BASIC4.09□□□□□ -1.75
Limch1Q3UH68 Gm14073-201ENSMUST00000117344 381 ntBASIC4.09□□□□□ -1.75
Limch1Q3UH68 Gm26027-201ENSMUST00000122725 268 ntBASIC4.09□□□□□ -1.75
Limch1Q3UH68 Gm22225-201ENSMUST00000157358 278 ntBASIC4.09□□□□□ -1.75
Limch1Q3UH68 Gm22883-201ENSMUST00000157376 106 ntBASIC4.09□□□□□ -1.75
Limch1Q3UH68 Gm23775-201ENSMUST00000158991 249 ntBASIC4.09□□□□□ -1.75
Limch1Q3UH68 Krtap27-1-201ENSMUST00000165580 646 ntAPPRIS P1 BASIC4.09□□□□□ -1.75
Limch1Q3UH68 Gm27718-201ENSMUST00000183721 86 ntBASIC4.09□□□□□ -1.75
Limch1Q3UH68 Gm28825-201ENSMUST00000186233 238 ntBASIC4.09□□□□□ -1.75
Limch1Q3UH68 Gm37587-202ENSMUST00000194935 475 ntTSL 3 BASIC4.09□□□□□ -1.75
Limch1Q3UH68 Gm43475-201ENSMUST00000196673 400 ntTSL 2 BASIC4.09□□□□□ -1.75
Limch1Q3UH68 Mir721-201ENSMUST00000200230 88 ntBASIC4.09□□□□□ -1.75
Limch1Q3UH68 D730003K21Rik-201ENSMUST00000215052 589 ntTSL 2 BASIC4.09□□□□□ -1.75
Limch1Q3UH68 AC114575.1-201ENSMUST00000218634 353 ntTSL 3 BASIC4.09□□□□□ -1.75
Limch1Q3UH68 Mir146-201ENSMUST00000083667 65 ntBASIC4.09□□□□□ -1.75
Limch1Q3UH68 Gm10553-201ENSMUST00000097669 372 ntAPPRIS P1 BASIC4.09□□□□□ -1.75
Limch1Q3UH68 Cp-202ENSMUST00000091309 4029 ntAPPRIS P3 TSL 1 (best) BASIC4.09□□□□□ -1.75
Limch1Q3UH68 Nebl-207ENSMUST00000132418 1734 ntTSL 1 (best) BASIC4.09□□□□□ -1.76
Limch1Q3UH68 Olfr1369-ps1-202ENSMUST00000213326 3707 ntAPPRIS P1 TSL 5 BASIC4.09□□□□□ -1.76
Limch1Q3UH68 Zfp119a-201ENSMUST00000079642 2018 ntAPPRIS P1 TSL 1 (best) BASIC4.09□□□□□ -1.76
Limch1Q3UH68 Vmn2r23-201ENSMUST00000172391 2602 ntAPPRIS P1 TSL 5 BASIC4.08□□□□□ -1.76
Limch1Q3UH68 Vmn1r83-202ENSMUST00000226701 2788 ntAPPRIS P1 BASIC4.08□□□□□ -1.76
Limch1Q3UH68 Ccdc178-202ENSMUST00000115837 2979 ntAPPRIS P1 TSL 1 (best) BASIC4.08□□□□□ -1.76
Limch1Q3UH68 Olfr1448-204ENSMUST00000216888 4064 ntAPPRIS P1 TSL 5 BASIC4.08□□□□□ -1.76
Limch1Q3UH68 Cp-204ENSMUST00000108328 4504 ntAPPRIS ALT2 TSL 1 (best) BASIC4.08□□□□□ -1.76
Limch1Q3UH68 Olfr713-202ENSMUST00000213623 6329 ntAPPRIS P1 TSL 5 BASIC4.08□□□□□ -1.76
Limch1Q3UH68 Gm25168-201ENSMUST00000104189 132 ntBASIC4.08□□□□□ -1.76
Limch1Q3UH68 Gm5762-201ENSMUST00000119204 258 ntBASIC4.08□□□□□ -1.76
Limch1Q3UH68 Gm14402-201ENSMUST00000122217 508 ntBASIC4.08□□□□□ -1.76
Limch1Q3UH68 Gm13467-201ENSMUST00000145568 281 ntTSL 5 BASIC4.08□□□□□ -1.76
Limch1Q3UH68 Gm22034-201ENSMUST00000157283 134 ntBASIC4.08□□□□□ -1.76
Limch1Q3UH68 Gm23642-201ENSMUST00000157858 258 ntBASIC4.08□□□□□ -1.76
Limch1Q3UH68 Zfp273-203ENSMUST00000181391 2399 ntAPPRIS P1 TSL 1 (best) BASIC4.08□□□□□ -1.76
Limch1Q3UH68 Wnk3-205ENSMUST00000184392 5394 ntAPPRIS P4 TSL 1 (best) BASIC4.08□□□□□ -1.76
Limch1Q3UH68 Traj57-202ENSMUST00000196977 63 ntAPPRIS P1 BASIC4.08□□□□□ -1.76
Limch1Q3UH68 Olfr454-ps1-201ENSMUST00000205206 348 ntBASIC4.08□□□□□ -1.76
Limch1Q3UH68 Gm36776-201ENSMUST00000207006 203 ntBASIC4.08□□□□□ -1.76
Limch1Q3UH68 Olfr476-202ENSMUST00000217173 2539 ntAPPRIS P1 TSL 5 BASIC4.08□□□□□ -1.76
Limch1Q3UH68 AC153361.1-201ENSMUST00000219679 247 ntBASIC4.08□□□□□ -1.76
Limch1Q3UH68 AC131759.1-201ENSMUST00000220642 310 ntTSL 3 BASIC4.08□□□□□ -1.76
Limch1Q3UH68 AC157572.3-201ENSMUST00000227288 303 ntBASIC4.08□□□□□ -1.76
Limch1Q3UH68 Gm10360-201ENSMUST00000097219 272 ntBASIC4.08□□□□□ -1.76
Limch1Q3UH68 Gm10813-201ENSMUST00000099936 90 ntBASIC4.08□□□□□ -1.76
Limch1Q3UH68 Olfr548-ps1-202ENSMUST00000210064 4287 ntAPPRIS P1 TSL 5 BASIC4.08□□□□□ -1.76
Limch1Q3UH68 Vmn2r59-201ENSMUST00000168489 2598 ntAPPRIS P1 TSL 5 BASIC4.08□□□□□ -1.76
Limch1Q3UH68 Olfr136-202ENSMUST00000208525 2534 ntAPPRIS P1 TSL 5 BASIC4.07□□□□□ -1.76
Limch1Q3UH68 Zfp980-202ENSMUST00000180014 1938 ntAPPRIS P1 TSL 2 BASIC4.07□□□□□ -1.76
Limch1Q3UH68 Sacs-203ENSMUST00000119943 14991 ntAPPRIS ALT2 TSL 5 BASIC4.07□□□□□ -1.76
Limch1Q3UH68 Btla-202ENSMUST00000102802 3251 ntAPPRIS ALT2 TSL 1 (best) BASIC4.07□□□□□ -1.76
Limch1Q3UH68 Vmn1r89-203ENSMUST00000227176 4189 ntAPPRIS P2 BASIC4.07□□□□□ -1.76
Limch1Q3UH68 Vmn2r27-201ENSMUST00000100968 2574 ntAPPRIS P1 TSL 5 BASIC4.07□□□□□ -1.76
Limch1Q3UH68 Vmn2r108-201ENSMUST00000167314 2568 ntAPPRIS P1 TSL 5 BASIC4.07□□□□□ -1.76
Limch1Q3UH68 Gm23532-201ENSMUST00000104569 112 ntBASIC4.07□□□□□ -1.76
Limch1Q3UH68 Gm14973-201ENSMUST00000117248 255 ntBASIC4.07□□□□□ -1.76
Limch1Q3UH68 Gm23592-201ENSMUST00000157859 117 ntBASIC4.07□□□□□ -1.76
Limch1Q3UH68 Gm27753-201ENSMUST00000184742 203 ntBASIC4.07□□□□□ -1.76
Limch1Q3UH68 Gm28828-201ENSMUST00000186601 696 ntBASIC4.07□□□□□ -1.76
Limch1Q3UH68 Gm29044-201ENSMUST00000188916 283 ntTSL 1 (best) BASIC4.07□□□□□ -1.76
Limch1Q3UH68 Olfr468-ps1-201ENSMUST00000207203 593 ntBASIC4.07□□□□□ -1.76
Limch1Q3UH68 Olfr1500-204ENSMUST00000215760 2305 ntAPPRIS P1 TSL 5 BASIC4.07□□□□□ -1.76
Limch1Q3UH68 Olfr1326-ps1-201ENSMUST00000059880 3637 ntAPPRIS P1 TSL 5 BASIC4.07□□□□□ -1.76
Limch1Q3UH68 Olfr1211-204ENSMUST00000215205 4220 ntAPPRIS P1 TSL 5 BASIC4.06□□□□□ -1.76
Limch1Q3UH68 Gm42446-201ENSMUST00000199783 3284 ntBASIC4.06□□□□□ -1.76
Limch1Q3UH68 Vmn1r206-202ENSMUST00000227244 3970 ntAPPRIS P1 BASIC4.06□□□□□ -1.76
Limch1Q3UH68 AC167250.1-201ENSMUST00000213739 3813 ntBASIC4.06□□□□□ -1.76
Limch1Q3UH68 Ighv1-54-201ENSMUST00000103525 377 ntAPPRIS P1 BASIC4.06□□□□□ -1.76
Limch1Q3UH68 Gm12858-201ENSMUST00000121913 208 ntBASIC4.06□□□□□ -1.76
Limch1Q3UH68 n-R5s179-201ENSMUST00000122564 118 ntBASIC4.06□□□□□ -1.76
Limch1Q3UH68 Gm25519-201ENSMUST00000158392 127 ntBASIC4.06□□□□□ -1.76
Retrieved 100 of 76,532 protein–RNA pairs in 152.5 ms