Protein–RNA interactions for Protein: Q3UDK1

Trafd1, TRAF-type zinc finger domain-containing protein 1, mousemouse

Predictions only

Length 580 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trafd1Q3UDK1 Gm5224-201ENSMUST00000183060 350 ntBASIC2.09□□□□□ -2.07
Trafd1Q3UDK1 Mir6370-201ENSMUST00000183510 120 ntBASIC2.09□□□□□ -2.07
Trafd1Q3UDK1 Mir7016-201ENSMUST00000184308 72 ntBASIC2.09□□□□□ -2.07
Trafd1Q3UDK1 Gm21647-201ENSMUST00000189755 664 ntBASIC2.09□□□□□ -2.07
Trafd1Q3UDK1 Gm40040-202ENSMUST00000196337 305 ntTSL 3 BASIC2.09□□□□□ -2.07
Trafd1Q3UDK1 Gm43587-201ENSMUST00000199590 204 ntBASIC2.09□□□□□ -2.07
Trafd1Q3UDK1 Gm43901-201ENSMUST00000203247 453 ntBASIC2.09□□□□□ -2.07
Trafd1Q3UDK1 Gm44446-201ENSMUST00000204864 255 ntBASIC2.09□□□□□ -2.07
Trafd1Q3UDK1 Olfr1304-ps1-201ENSMUST00000208032 189 ntBASIC2.09□□□□□ -2.07
Trafd1Q3UDK1 Gm10264-201ENSMUST00000220589 429 ntBASIC2.09□□□□□ -2.07
Trafd1Q3UDK1 AC122465.2-201ENSMUST00000221774 354 ntBASIC2.09□□□□□ -2.07
Trafd1Q3UDK1 Olfr835-201ENSMUST00000059315 936 ntAPPRIS P1 BASIC2.09□□□□□ -2.07
Trafd1Q3UDK1 Mir181a-1-201ENSMUST00000083631 87 ntBASIC2.09□□□□□ -2.07
Trafd1Q3UDK1 Ifi203-205ENSMUST00000129829 3054 ntAPPRIS ALT2 TSL 1 (best) BASIC2.09□□□□□ -2.07
Trafd1Q3UDK1 Vmn1r185-204ENSMUST00000227411 4928 ntAPPRIS P1 BASIC2.09□□□□□ -2.07
Trafd1Q3UDK1 Gm37331-201ENSMUST00000192367 3375 ntBASIC2.08□□□□□ -2.08
Trafd1Q3UDK1 Gm24126-201ENSMUST00000104111 106 ntBASIC2.08□□□□□ -2.08
Trafd1Q3UDK1 Gm12941-201ENSMUST00000117934 220 ntBASIC2.08□□□□□ -2.08
Trafd1Q3UDK1 Gm13409-201ENSMUST00000122072 546 ntBASIC2.08□□□□□ -2.08
Trafd1Q3UDK1 Gm27510-201ENSMUST00000158214 64 ntBASIC2.08□□□□□ -2.08
Trafd1Q3UDK1 Gm24056-201ENSMUST00000158617 146 ntBASIC2.08□□□□□ -2.08
Trafd1Q3UDK1 Vmn1r-ps15-201ENSMUST00000177365 910 ntBASIC2.08□□□□□ -2.08
Trafd1Q3UDK1 Gm26501-201ENSMUST00000178307 107 ntBASIC2.08□□□□□ -2.08
Trafd1Q3UDK1 Gm23191-201ENSMUST00000179147 107 ntBASIC2.08□□□□□ -2.08
Trafd1Q3UDK1 Mir7667-201ENSMUST00000183866 63 ntBASIC2.08□□□□□ -2.08
Trafd1Q3UDK1 Gm28090-201ENSMUST00000189458 664 ntBASIC2.08□□□□□ -2.08
Trafd1Q3UDK1 Gm9402-201ENSMUST00000196849 388 ntBASIC2.08□□□□□ -2.08
Trafd1Q3UDK1 Gm44524-201ENSMUST00000203899 271 ntBASIC2.08□□□□□ -2.08
Trafd1Q3UDK1 RMST_1.1-206ENSMUST00000218255 309 ntTSL 3 BASIC2.08□□□□□ -2.08
Trafd1Q3UDK1 AC123533.1-201ENSMUST00000227782 446 ntBASIC2.08□□□□□ -2.08
Trafd1Q3UDK1 Skint11-201ENSMUST00000079915 820 ntTSL 1 (best) BASIC2.08□□□□□ -2.08
Trafd1Q3UDK1 n-R5s94-201ENSMUST00000082573 119 ntBASIC2.08□□□□□ -2.08
Trafd1Q3UDK1 Olfr1291-ps1-201ENSMUST00000121345 5403 ntAPPRIS P1 TSL 5 BASIC2.08□□□□□ -2.08
Trafd1Q3UDK1 Gm19541-201ENSMUST00000184488 2868 ntTSL 1 (best) BASIC2.08□□□□□ -2.08
Trafd1Q3UDK1 Olfr138-203ENSMUST00000173841 1865 ntAPPRIS P1 TSL 2 BASIC2.07□□□□□ -2.08
Trafd1Q3UDK1 Olfr851-202ENSMUST00000214130 7123 ntAPPRIS P1 TSL 5 BASIC2.07□□□□□ -2.08
Trafd1Q3UDK1 Gm15714-201ENSMUST00000117168 250 ntBASIC2.07□□□□□ -2.08
Trafd1Q3UDK1 Gm14073-201ENSMUST00000117344 381 ntBASIC2.07□□□□□ -2.08
Trafd1Q3UDK1 Gm16242-201ENSMUST00000117741 334 ntBASIC2.07□□□□□ -2.08
Trafd1Q3UDK1 Gm15029-201ENSMUST00000119742 199 ntBASIC2.07□□□□□ -2.08
Trafd1Q3UDK1 Gm23435-201ENSMUST00000157183 156 ntBASIC2.07□□□□□ -2.08
Trafd1Q3UDK1 Gm23048-201ENSMUST00000157237 129 ntBASIC2.07□□□□□ -2.08
Trafd1Q3UDK1 Gm24908-201ENSMUST00000157294 127 ntBASIC2.07□□□□□ -2.08
Trafd1Q3UDK1 Gm24010-201ENSMUST00000157731 282 ntBASIC2.07□□□□□ -2.08
Trafd1Q3UDK1 Gm25434-201ENSMUST00000158278 167 ntBASIC2.07□□□□□ -2.08
Trafd1Q3UDK1 Gm24499-201ENSMUST00000158446 104 ntBASIC2.07□□□□□ -2.08
Trafd1Q3UDK1 Gm24885-201ENSMUST00000158783 270 ntBASIC2.07□□□□□ -2.08
Trafd1Q3UDK1 Gm6660-201ENSMUST00000179149 468 ntBASIC2.07□□□□□ -2.08
Trafd1Q3UDK1 Gm26914-201ENSMUST00000182262 223 ntBASIC2.07□□□□□ -2.08
Trafd1Q3UDK1 Mir6997-201ENSMUST00000184313 71 ntBASIC2.07□□□□□ -2.08
Trafd1Q3UDK1 Gm10105-201ENSMUST00000184601 270 ntBASIC2.07□□□□□ -2.08
Trafd1Q3UDK1 Gm6059-201ENSMUST00000196903 340 ntBASIC2.07□□□□□ -2.08
Trafd1Q3UDK1 Obox4-ps25-201ENSMUST00000199090 210 ntBASIC2.07□□□□□ -2.08
Trafd1Q3UDK1 AC154296.2-201ENSMUST00000214696 545 ntBASIC2.07□□□□□ -2.08
Trafd1Q3UDK1 AC109212.1-201ENSMUST00000215561 427 ntBASIC2.07□□□□□ -2.08
Trafd1Q3UDK1 AC124772.1-201ENSMUST00000221325 151 ntBASIC2.07□□□□□ -2.08
Trafd1Q3UDK1 AC126440.1-201ENSMUST00000227098 349 ntBASIC2.07□□□□□ -2.08
Trafd1Q3UDK1 Gm22443-201ENSMUST00000082890 107 ntBASIC2.07□□□□□ -2.08
Trafd1Q3UDK1 Olfr1340-201ENSMUST00000094834 951 ntAPPRIS P1 BASIC2.07□□□□□ -2.08
Trafd1Q3UDK1 Cyp3a59-201ENSMUST00000035571 1990 ntAPPRIS P1 TSL 1 (best) BASIC2.07□□□□□ -2.08
Trafd1Q3UDK1 Olfr498-201ENSMUST00000217616 2260 ntAPPRIS P1 BASIC2.06□□□□□ -2.08
Trafd1Q3UDK1 Igkv5-39-201ENSMUST00000103370 287 ntAPPRIS P1 BASIC2.06□□□□□ -2.08
Trafd1Q3UDK1 Gm25094-201ENSMUST00000103992 131 ntBASIC2.06□□□□□ -2.08
Trafd1Q3UDK1 Gm23950-201ENSMUST00000104026 129 ntBASIC2.06□□□□□ -2.08
Trafd1Q3UDK1 Rps15a-ps6-201ENSMUST00000117476 393 ntBASIC2.06□□□□□ -2.08
Trafd1Q3UDK1 Gm13457-201ENSMUST00000117885 267 ntBASIC2.06□□□□□ -2.08
Trafd1Q3UDK1 Gm14588-201ENSMUST00000119895 172 ntBASIC2.06□□□□□ -2.08
Trafd1Q3UDK1 Gm11834-201ENSMUST00000122257 585 ntBASIC2.06□□□□□ -2.08
Trafd1Q3UDK1 Gm25325-201ENSMUST00000122559 86 ntBASIC2.06□□□□□ -2.08
Trafd1Q3UDK1 Gm22073-201ENSMUST00000122668 189 ntBASIC2.06□□□□□ -2.08
Trafd1Q3UDK1 Gm22037-201ENSMUST00000157280 296 ntBASIC2.06□□□□□ -2.08
Trafd1Q3UDK1 Gm23342-201ENSMUST00000158958 115 ntBASIC2.06□□□□□ -2.08
Trafd1Q3UDK1 Ear10-201ENSMUST00000159175 678 ntAPPRIS P1 TSL 1 (best) BASIC2.06□□□□□ -2.08
Trafd1Q3UDK1 Gm23933-201ENSMUST00000178405 79 ntBASIC2.06□□□□□ -2.08
Trafd1Q3UDK1 Esp4-201ENSMUST00000178498 553 ntAPPRIS P1 TSL 1 (best) BASIC2.06□□□□□ -2.08
Trafd1Q3UDK1 Gm28740-201ENSMUST00000186142 215 ntBASIC2.06□□□□□ -2.08
Trafd1Q3UDK1 Gm28951-201ENSMUST00000190742 313 ntBASIC2.06□□□□□ -2.08
Trafd1Q3UDK1 Gm34302-201ENSMUST00000192926 243 ntAPPRIS P1 TSL 5 BASIC2.06□□□□□ -2.08
Trafd1Q3UDK1 Gm37054-201ENSMUST00000193481 543 ntBASIC2.06□□□□□ -2.08
Trafd1Q3UDK1 Gm32033-201ENSMUST00000193483 339 ntBASIC2.06□□□□□ -2.08
Trafd1Q3UDK1 Gm18971-201ENSMUST00000197240 374 ntBASIC2.06□□□□□ -2.08
Trafd1Q3UDK1 Igkv1-108-201ENSMUST00000198926 298 ntBASIC2.06□□□□□ -2.08
Trafd1Q3UDK1 Gm43505-201ENSMUST00000200579 139 ntBASIC2.06□□□□□ -2.08
Trafd1Q3UDK1 4930431P19Rik-201ENSMUST00000207570 451 ntBASIC2.06□□□□□ -2.08
Trafd1Q3UDK1 AL603630.1-201ENSMUST00000214781 147 ntBASIC2.06□□□□□ -2.08
Trafd1Q3UDK1 Sva-201ENSMUST00000024059 651 ntAPPRIS P2 TSL 1 (best) BASIC2.06□□□□□ -2.08
Trafd1Q3UDK1 Olfr197-201ENSMUST00000080031 926 ntBASIC2.06□□□□□ -2.08
Trafd1Q3UDK1 Olfr822-201ENSMUST00000080460 942 ntAPPRIS P1 BASIC2.06□□□□□ -2.08
Trafd1Q3UDK1 Olfr479-202ENSMUST00000209805 2902 ntAPPRIS P1 TSL 5 BASIC2.06□□□□□ -2.08
Trafd1Q3UDK1 AW554918-203ENSMUST00000100131 1684 ntTSL 5 BASIC2.06□□□□□ -2.08
Trafd1Q3UDK1 Zfp273-201ENSMUST00000012725 2277 ntTSL 1 (best) BASIC2.05□□□□□ -2.08
Trafd1Q3UDK1 Olfr1029-202ENSMUST00000217244 3743 ntAPPRIS P1 TSL 5 BASIC2.05□□□□□ -2.08
Trafd1Q3UDK1 AC117226.1-201ENSMUST00000221635 3737 ntBASIC2.05□□□□□ -2.08
Trafd1Q3UDK1 Gm14670-201ENSMUST00000117327 337 ntBASIC2.05□□□□□ -2.08
Trafd1Q3UDK1 Gm16355-201ENSMUST00000128606 231 ntBASIC2.05□□□□□ -2.08
Trafd1Q3UDK1 Gm13661-201ENSMUST00000154297 318 ntTSL 3 BASIC2.05□□□□□ -2.08
Trafd1Q3UDK1 Gm25339-201ENSMUST00000157458 232 ntBASIC2.05□□□□□ -2.08
Trafd1Q3UDK1 Gm22389-201ENSMUST00000158193 301 ntBASIC2.05□□□□□ -2.08
Trafd1Q3UDK1 Gm7925-201ENSMUST00000166690 401 ntBASIC2.05□□□□□ -2.08
Trafd1Q3UDK1 Vmn1r-ps31-201ENSMUST00000174112 238 ntBASIC2.05□□□□□ -2.08
Retrieved 100 of 76,532 protein–RNA pairs in 97.5 ms