Protein–RNA interactions for Protein: Q3MI99

Ccbe1, Collagen and calcium-binding EGF domain-containing protein 1, mousemouse

Predictions only

Length 408 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccbe1Q3MI99 Gm24492-201ENSMUST00000083798 107 ntBASIC3.2□□□□□ -1.9
Ccbe1Q3MI99 Zfp990-202ENSMUST00000105742 2996 ntAPPRIS P1 TSL 2 BASIC3.2□□□□□ -1.9
Ccbe1Q3MI99 Gm37928-201ENSMUST00000193265 4131 ntBASIC3.2□□□□□ -1.9
Ccbe1Q3MI99 Gm44150-201ENSMUST00000203317 2619 ntBASIC3.2□□□□□ -1.9
Ccbe1Q3MI99 Olfr24-203ENSMUST00000216754 4327 ntAPPRIS P1 TSL 2 BASIC3.2□□□□□ -1.9
Ccbe1Q3MI99 Vmn1r14-202ENSMUST00000227209 6857 ntAPPRIS ALT2 BASIC3.2□□□□□ -1.9
Ccbe1Q3MI99 Ighv16-1-201ENSMUST00000103470 299 ntAPPRIS P1 BASIC3.19□□□□□ -1.9
Ccbe1Q3MI99 Traj12-201ENSMUST00000103729 58 ntAPPRIS P1 BASIC3.19□□□□□ -1.9
Ccbe1Q3MI99 Mir465b-1-201ENSMUST00000103940 79 ntBASIC3.19□□□□□ -1.9
Ccbe1Q3MI99 Mir465b-2-201ENSMUST00000104662 79 ntBASIC3.19□□□□□ -1.9
Ccbe1Q3MI99 Gm23651-201ENSMUST00000116755 120 ntBASIC3.19□□□□□ -1.9
Ccbe1Q3MI99 Gm11645-201ENSMUST00000121589 649 ntBASIC3.19□□□□□ -1.9
Ccbe1Q3MI99 Gm12325-201ENSMUST00000135553 320 ntTSL 5 BASIC3.19□□□□□ -1.9
Ccbe1Q3MI99 Gm23466-201ENSMUST00000157133 106 ntBASIC3.19□□□□□ -1.9
Ccbe1Q3MI99 Gm7582-201ENSMUST00000160831 603 ntBASIC3.19□□□□□ -1.9
Ccbe1Q3MI99 Ang-ps2-201ENSMUST00000178173 433 ntBASIC3.19□□□□□ -1.9
Ccbe1Q3MI99 Smcp-202ENSMUST00000194965 744 ntAPPRIS P1 TSL 3 BASIC3.19□□□□□ -1.9
Ccbe1Q3MI99 Gm44294-201ENSMUST00000205090 728 ntBASIC3.19□□□□□ -1.9
Ccbe1Q3MI99 Gm45355-201ENSMUST00000211342 296 ntTSL 3 BASIC3.19□□□□□ -1.9
Ccbe1Q3MI99 AC105958.2-201ENSMUST00000214167 191 ntBASIC3.19□□□□□ -1.9
Ccbe1Q3MI99 AC123803.1-201ENSMUST00000216093 189 ntBASIC3.19□□□□□ -1.9
Ccbe1Q3MI99 AL590503.1-201ENSMUST00000222053 321 ntBASIC3.19□□□□□ -1.9
Ccbe1Q3MI99 Defb39-201ENSMUST00000075504 252 ntAPPRIS P1 TSL 1 (best) BASIC3.19□□□□□ -1.9
Ccbe1Q3MI99 Gm22062-201ENSMUST00000082563 107 ntBASIC3.19□□□□□ -1.9
Ccbe1Q3MI99 Gm45662-201ENSMUST00000210054 2098 ntBASIC3.19□□□□□ -1.9
Ccbe1Q3MI99 Olfr1354-202ENSMUST00000204587 3781 ntAPPRIS P1 TSL 2 BASIC3.19□□□□□ -1.9
Ccbe1Q3MI99 Ogn-201ENSMUST00000021822 2566 ntAPPRIS P1 TSL 1 (best) BASIC3.18□□□□□ -1.9
Ccbe1Q3MI99 Catsper4-202ENSMUST00000105878 632 ntTSL 1 (best) BASIC3.18□□□□□ -1.9
Ccbe1Q3MI99 Gm14401-201ENSMUST00000108968 247 ntTSL 5 BASIC3.18□□□□□ -1.9
Ccbe1Q3MI99 Gm26473-201ENSMUST00000116763 127 ntBASIC3.18□□□□□ -1.9
Ccbe1Q3MI99 Gm14894-201ENSMUST00000117170 270 ntBASIC3.18□□□□□ -1.9
Ccbe1Q3MI99 Gm6071-201ENSMUST00000119561 440 ntBASIC3.18□□□□□ -1.9
Ccbe1Q3MI99 Gm11204-201ENSMUST00000122438 147 ntBASIC3.18□□□□□ -1.9
Ccbe1Q3MI99 Gm22321-201ENSMUST00000157152 104 ntBASIC3.18□□□□□ -1.9
Ccbe1Q3MI99 Gm23098-201ENSMUST00000157552 299 ntBASIC3.18□□□□□ -1.9
Ccbe1Q3MI99 Gm22606-201ENSMUST00000158290 103 ntBASIC3.18□□□□□ -1.9
Ccbe1Q3MI99 Gm25121-201ENSMUST00000179846 79 ntBASIC3.18□□□□□ -1.9
Ccbe1Q3MI99 Mir6386-201ENSMUST00000183558 104 ntBASIC3.18□□□□□ -1.9
Ccbe1Q3MI99 Mir6408-201ENSMUST00000183643 91 ntBASIC3.18□□□□□ -1.9
Ccbe1Q3MI99 Gm28148-201ENSMUST00000186924 697 ntBASIC3.18□□□□□ -1.9
Ccbe1Q3MI99 Rhoay-ps1-201ENSMUST00000191243 581 ntBASIC3.18□□□□□ -1.9
Ccbe1Q3MI99 Gm37449-201ENSMUST00000193016 270 ntBASIC3.18□□□□□ -1.9
Ccbe1Q3MI99 Gm18658-201ENSMUST00000195558 270 ntBASIC3.18□□□□□ -1.9
Ccbe1Q3MI99 Rpl18a-ps3-201ENSMUST00000198938 171 ntBASIC3.18□□□□□ -1.9
Ccbe1Q3MI99 Gm30146-201ENSMUST00000206564 605 ntTSL 1 (best) BASIC3.18□□□□□ -1.9
Ccbe1Q3MI99 Gm7065-201ENSMUST00000222150 474 ntBASIC3.18□□□□□ -1.9
Ccbe1Q3MI99 Gm31447-201ENSMUST00000222345 384 ntTSL 3 BASIC3.18□□□□□ -1.9
Ccbe1Q3MI99 Gm3829-201ENSMUST00000222362 619 ntBASIC3.18□□□□□ -1.9
Ccbe1Q3MI99 Mir132-201ENSMUST00000083603 66 ntBASIC3.18□□□□□ -1.9
Ccbe1Q3MI99 Gm10351-201ENSMUST00000087694 125 ntBASIC3.18□□□□□ -1.9
Ccbe1Q3MI99 Gm36944-201ENSMUST00000192257 2759 ntBASIC3.17□□□□□ -1.9
Ccbe1Q3MI99 Xiap-201ENSMUST00000026978 6834 ntAPPRIS P1 TSL 1 (best) BASIC3.17□□□□□ -1.9
Ccbe1Q3MI99 Gm25764-201ENSMUST00000104092 134 ntBASIC3.17□□□□□ -1.9
Ccbe1Q3MI99 Gm22027-201ENSMUST00000122737 127 ntBASIC3.17□□□□□ -1.9
Ccbe1Q3MI99 Ppp1r2-ps7-201ENSMUST00000140102 609 ntBASIC3.17□□□□□ -1.9
Ccbe1Q3MI99 Gm23982-201ENSMUST00000157141 106 ntBASIC3.17□□□□□ -1.9
Ccbe1Q3MI99 Gm23380-201ENSMUST00000158448 103 ntBASIC3.17□□□□□ -1.9
Ccbe1Q3MI99 Gm26406-201ENSMUST00000158503 124 ntBASIC3.17□□□□□ -1.9
Ccbe1Q3MI99 Gm23112-201ENSMUST00000158606 125 ntBASIC3.17□□□□□ -1.9
Ccbe1Q3MI99 Mir1251-201ENSMUST00000175486 84 ntBASIC3.17□□□□□ -1.9
Ccbe1Q3MI99 Vmn2r-ps17-201ENSMUST00000178733 375 ntBASIC3.17□□□□□ -1.9
Ccbe1Q3MI99 Gm37162-201ENSMUST00000191708 551 ntBASIC3.17□□□□□ -1.9
Ccbe1Q3MI99 Gm19901-201ENSMUST00000192191 495 ntBASIC3.17□□□□□ -1.9
Ccbe1Q3MI99 Gm18982-201ENSMUST00000198118 529 ntBASIC3.17□□□□□ -1.9
Ccbe1Q3MI99 Mir1a-2-201ENSMUST00000198520 72 ntBASIC3.17□□□□□ -1.9
Ccbe1Q3MI99 Gm44010-201ENSMUST00000204432 331 ntBASIC3.17□□□□□ -1.9
Ccbe1Q3MI99 Vmn1r-ps16-201ENSMUST00000204747 105 ntBASIC3.17□□□□□ -1.9
Ccbe1Q3MI99 CT030242.2-201ENSMUST00000221588 148 ntBASIC3.17□□□□□ -1.9
Ccbe1Q3MI99 Gm23932-201ENSMUST00000082914 107 ntBASIC3.17□□□□□ -1.9
Ccbe1Q3MI99 Gm23722-201ENSMUST00000083002 130 ntBASIC3.17□□□□□ -1.9
Ccbe1Q3MI99 Gm42659-201ENSMUST00000196955 1754 ntBASIC3.17□□□□□ -1.9
Ccbe1Q3MI99 Gm44715-201ENSMUST00000209049 3839 ntBASIC3.17□□□□□ -1.9
Ccbe1Q3MI99 Gm8978-201ENSMUST00000124230 2224 ntTSL 5 BASIC3.16□□□□□ -1.9
Ccbe1Q3MI99 Mir466b-3-201ENSMUST00000103806 81 ntBASIC3.16□□□□□ -1.9
Ccbe1Q3MI99 Rps15a-ps3-201ENSMUST00000121072 395 ntBASIC3.16□□□□□ -1.9
Ccbe1Q3MI99 Gm25177-201ENSMUST00000122634 117 ntBASIC3.16□□□□□ -1.9
Ccbe1Q3MI99 Gm14684-201ENSMUST00000145722 123 ntTSL 5 BASIC3.16□□□□□ -1.9
Ccbe1Q3MI99 Gm16354-201ENSMUST00000155376 150 ntBASIC3.16□□□□□ -1.9
Ccbe1Q3MI99 Gm22212-201ENSMUST00000158096 106 ntBASIC3.16□□□□□ -1.9
Ccbe1Q3MI99 Gm22447-201ENSMUST00000158155 92 ntBASIC3.16□□□□□ -1.9
Ccbe1Q3MI99 Gm25863-201ENSMUST00000158249 329 ntBASIC3.16□□□□□ -1.9
Ccbe1Q3MI99 Gm24553-201ENSMUST00000158653 131 ntBASIC3.16□□□□□ -1.9
Ccbe1Q3MI99 Gm16162-201ENSMUST00000162296 297 ntBASIC3.16□□□□□ -1.9
Ccbe1Q3MI99 Gm14419-204ENSMUST00000178182 192 ntTSL 1 (best) BASIC3.16□□□□□ -1.9
Ccbe1Q3MI99 Gm2004-202ENSMUST00000178872 192 ntTSL 1 (best) BASIC3.16□□□□□ -1.9
Ccbe1Q3MI99 Gm14295-203ENSMUST00000179435 192 ntTSL 5 BASIC3.16□□□□□ -1.9
Ccbe1Q3MI99 Mir6345-201ENSMUST00000184286 128 ntBASIC3.16□□□□□ -1.9
Ccbe1Q3MI99 Gm37693-201ENSMUST00000194562 234 ntBASIC3.16□□□□□ -1.9
Ccbe1Q3MI99 Gm43853-201ENSMUST00000197162 301 ntBASIC3.16□□□□□ -1.9
Ccbe1Q3MI99 Snord80-202ENSMUST00000199023 77 ntBASIC3.16□□□□□ -1.9
Ccbe1Q3MI99 Igkv8-31-201ENSMUST00000200040 372 ntBASIC3.16□□□□□ -1.9
Ccbe1Q3MI99 Gm43901-201ENSMUST00000203247 453 ntBASIC3.16□□□□□ -1.9
Ccbe1Q3MI99 Gm44073-201ENSMUST00000204173 429 ntTSL 3 BASIC3.16□□□□□ -1.9
Ccbe1Q3MI99 Gm21007-201ENSMUST00000221024 326 ntBASIC3.16□□□□□ -1.9
Ccbe1Q3MI99 Cdrt4-201ENSMUST00000035854 723 ntAPPRIS P1 TSL 1 (best) BASIC3.16□□□□□ -1.9
Ccbe1Q3MI99 Gm5239-201ENSMUST00000081864 369 ntAPPRIS P1 BASIC3.16□□□□□ -1.9
Ccbe1Q3MI99 Gm25200-201ENSMUST00000083094 130 ntBASIC3.16□□□□□ -1.9
Ccbe1Q3MI99 Olfr1448-202ENSMUST00000213177 3979 ntAPPRIS P1 TSL 5 BASIC3.16□□□□□ -1.9
Ccbe1Q3MI99 Olfr789-202ENSMUST00000213992 4421 ntAPPRIS P1 TSL 5 BASIC3.16□□□□□ -1.9
Ccbe1Q3MI99 Olfr913-201ENSMUST00000081095 2441 ntAPPRIS P1 TSL 3 BASIC3.15□□□□□ -1.9
Retrieved 100 of 76,532 protein–RNA pairs in 82.3 ms