Protein–RNA interactions for Protein: Q00780

Col8a1, Collagen alpha-1(VIII) chain, mousemouse

Predictions only

Length 744 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col8a1Q00780 Igkv9-124-201ENSMUST00000103312 287 ntAPPRIS P1 BASIC3.13□□□□□ -1.91
Col8a1Q00780 Psmb7-ps2-201ENSMUST00000118546 820 ntBASIC3.13□□□□□ -1.91
Col8a1Q00780 Gm12071-201ENSMUST00000121968 469 ntBASIC3.13□□□□□ -1.91
Col8a1Q00780 Gm22988-201ENSMUST00000122759 144 ntBASIC3.13□□□□□ -1.91
Col8a1Q00780 Gm23152-201ENSMUST00000175322 116 ntBASIC3.13□□□□□ -1.91
Col8a1Q00780 Gm27220-201ENSMUST00000183453 262 ntBASIC3.13□□□□□ -1.91
Col8a1Q00780 Igkv1-108-201ENSMUST00000198926 298 ntBASIC3.13□□□□□ -1.91
Col8a1Q00780 Gm10400-201ENSMUST00000203920 3835 ntBASIC3.13□□□□□ -1.91
Col8a1Q00780 AC153361.1-201ENSMUST00000219679 247 ntBASIC3.13□□□□□ -1.91
Col8a1Q00780 AC133517.1-202ENSMUST00000224409 233 ntBASIC3.13□□□□□ -1.91
Col8a1Q00780 AC166095.1-203ENSMUST00000224591 233 ntBASIC3.13□□□□□ -1.91
Col8a1Q00780 4930469B13Rik-202ENSMUST00000224808 348 ntBASIC3.13□□□□□ -1.91
Col8a1Q00780 Gm24948-201ENSMUST00000082866 207 ntBASIC3.13□□□□□ -1.91
Col8a1Q00780 Gm25630-201ENSMUST00000084000 162 ntBASIC3.13□□□□□ -1.91
Col8a1Q00780 Vmn1r185-207ENSMUST00000227695 5292 ntAPPRIS P1 BASIC3.13□□□□□ -1.91
Col8a1Q00780 Olfr918-202ENSMUST00000215461 3783 ntAPPRIS ALT2 TSL 5 BASIC3.13□□□□□ -1.91
Col8a1Q00780 Cd46-203ENSMUST00000162650 6288 ntAPPRIS P1 TSL 1 (best) BASIC3.13□□□□□ -1.91
Col8a1Q00780 Olfr733-203ENSMUST00000214756 3640 ntAPPRIS P1 TSL 5 BASIC3.13□□□□□ -1.91
Col8a1Q00780 Olfr235-205ENSMUST00000214638 3459 ntAPPRIS P1 TSL 5 BASIC3.13□□□□□ -1.91
Col8a1Q00780 Cntn6-202ENSMUST00000161070 3515 ntTSL 5 BASIC3.13□□□□□ -1.91
Col8a1Q00780 Gm38207-201ENSMUST00000193009 3505 ntBASIC3.13□□□□□ -1.91
Col8a1Q00780 Vmn1r71-205ENSMUST00000227940 4725 ntAPPRIS P2 BASIC3.12□□□□□ -1.91
Col8a1Q00780 Zfp458-201ENSMUST00000045969 3488 ntAPPRIS P2 TSL 1 (best) BASIC3.12□□□□□ -1.91
Col8a1Q00780 Strbp-201ENSMUST00000028279 16348 ntAPPRIS P1 TSL 5 BASIC3.12□□□□□ -1.91
Col8a1Q00780 Gm23697-201ENSMUST00000103897 110 ntBASIC3.12□□□□□ -1.91
Col8a1Q00780 Gm24118-201ENSMUST00000103972 126 ntBASIC3.12□□□□□ -1.91
Col8a1Q00780 Gm26273-201ENSMUST00000104180 131 ntBASIC3.12□□□□□ -1.91
Col8a1Q00780 n-R5s216-201ENSMUST00000122755 112 ntBASIC3.12□□□□□ -1.91
Col8a1Q00780 Gm13853-201ENSMUST00000155496 557 ntTSL 3 BASIC3.12□□□□□ -1.91
Col8a1Q00780 Gm24244-201ENSMUST00000157317 130 ntBASIC3.12□□□□□ -1.91
Col8a1Q00780 Gm22883-201ENSMUST00000157376 106 ntBASIC3.12□□□□□ -1.91
Col8a1Q00780 Gm25424-201ENSMUST00000157612 58 ntBASIC3.12□□□□□ -1.91
Col8a1Q00780 Gm22476-201ENSMUST00000158902 100 ntBASIC3.12□□□□□ -1.91
Col8a1Q00780 Obox4-ps37-201ENSMUST00000177223 276 ntBASIC3.12□□□□□ -1.91
Col8a1Q00780 Gm29155-202ENSMUST00000186289 216 ntTSL 5 BASIC3.12□□□□□ -1.91
Col8a1Q00780 Gm28828-201ENSMUST00000186601 696 ntBASIC3.12□□□□□ -1.91
Col8a1Q00780 Gm28159-201ENSMUST00000190296 696 ntBASIC3.12□□□□□ -1.91
Col8a1Q00780 Igkv13-57-1-201ENSMUST00000198063 305 ntBASIC3.12□□□□□ -1.91
Col8a1Q00780 Gm44182-201ENSMUST00000204052 115 ntBASIC3.12□□□□□ -1.91
Col8a1Q00780 AC171203.1-201ENSMUST00000215363 456 ntTSL 5 BASIC3.12□□□□□ -1.91
Col8a1Q00780 Vmn1r45-205ENSMUST00000227571 2757 ntBASIC3.12□□□□□ -1.91
Col8a1Q00780 Lrrc19-201ENSMUST00000053419 2780 ntAPPRIS P1 TSL 1 (best) BASIC3.12□□□□□ -1.91
Col8a1Q00780 Gm7135-202ENSMUST00000191257 1905 ntBASIC3.12□□□□□ -1.91
Col8a1Q00780 Vmn2r71-201ENSMUST00000172338 2568 ntAPPRIS P1 TSL 5 BASIC3.12□□□□□ -1.91
Col8a1Q00780 Vmn2r91-201ENSMUST00000172359 2571 ntAPPRIS P1 TSL 5 BASIC3.12□□□□□ -1.91
Col8a1Q00780 Gm2093-201ENSMUST00000180518 3526 ntTSL 1 (best) BASIC3.12□□□□□ -1.91
Col8a1Q00780 Gm14443-201ENSMUST00000109054 4516 ntAPPRIS P1 TSL 5 BASIC3.12□□□□□ -1.91
Col8a1Q00780 Olfr437-202ENSMUST00000205175 2952 ntAPPRIS P1 TSL 5 BASIC3.12□□□□□ -1.91
Col8a1Q00780 Gm14696-201ENSMUST00000144294 3976 ntTSL 1 (best) BASIC3.11□□□□□ -1.91
Col8a1Q00780 Gm45264-201ENSMUST00000210090 3995 ntBASIC3.11□□□□□ -1.91
Col8a1Q00780 Ccr2-202ENSMUST00000165984 3515 ntAPPRIS P1 BASIC3.11□□□□□ -1.91
Col8a1Q00780 Gm6639-202ENSMUST00000196841 2666 ntTSL 5 BASIC3.11□□□□□ -1.91
Col8a1Q00780 Gm42993-201ENSMUST00000196856 7325 ntBASIC3.11□□□□□ -1.91
Col8a1Q00780 Vmn1r185-213ENSMUST00000228676 5199 ntAPPRIS P1 BASIC3.11□□□□□ -1.91
Col8a1Q00780 Vmn1r30-203ENSMUST00000227466 1798 ntAPPRIS P1 BASIC3.11□□□□□ -1.91
Col8a1Q00780 Gm24234-201ENSMUST00000104316 107 ntBASIC3.11□□□□□ -1.91
Col8a1Q00780 Mir1b-201ENSMUST00000117012 122 ntBASIC3.11□□□□□ -1.91
Col8a1Q00780 Gm11534-201ENSMUST00000125956 204 ntTSL 3 BASIC3.11□□□□□ -1.91
Col8a1Q00780 Mir21b-201ENSMUST00000184317 108 ntBASIC3.11□□□□□ -1.91
Col8a1Q00780 Trbv6-201ENSMUST00000193743 276 ntBASIC3.11□□□□□ -1.91
Col8a1Q00780 AC138401.2-201ENSMUST00000220461 365 ntBASIC3.11□□□□□ -1.91
Col8a1Q00780 AL645546.1-201ENSMUST00000225001 189 ntBASIC3.11□□□□□ -1.91
Col8a1Q00780 Olfr1322-202ENSMUST00000217355 3886 ntAPPRIS P1 TSL 5 BASIC3.11□□□□□ -1.91
Col8a1Q00780 Gm4788-203ENSMUST00000111989 3187 ntAPPRIS P2 TSL 1 (best) BASIC3.11□□□□□ -1.91
Col8a1Q00780 Gmnc-201ENSMUST00000089832 4083 ntAPPRIS P1 TSL 1 (best) BASIC3.11□□□□□ -1.91
Col8a1Q00780 Olfr1105-202ENSMUST00000215978 3012 ntAPPRIS P1 TSL 3 BASIC3.1□□□□□ -1.91
Col8a1Q00780 Gm22750-201ENSMUST00000102076 103 ntBASIC3.1□□□□□ -1.91
Col8a1Q00780 Tra2b-ps-201ENSMUST00000119906 168 ntBASIC3.1□□□□□ -1.91
Col8a1Q00780 Gm13443-201ENSMUST00000120770 555 ntBASIC3.1□□□□□ -1.91
Col8a1Q00780 Gm12926-201ENSMUST00000121158 409 ntBASIC3.1□□□□□ -1.91
Col8a1Q00780 Uqcrh-ps2-201ENSMUST00000121613 269 ntBASIC3.1□□□□□ -1.91
Col8a1Q00780 Gm11334-201ENSMUST00000121969 156 ntBASIC3.1□□□□□ -1.91
Col8a1Q00780 Gm25543-201ENSMUST00000122678 312 ntBASIC3.1□□□□□ -1.91
Col8a1Q00780 Mir1942-201ENSMUST00000157274 63 ntBASIC3.1□□□□□ -1.91
Col8a1Q00780 Gm23331-201ENSMUST00000157423 108 ntBASIC3.1□□□□□ -1.91
Col8a1Q00780 Gm26157-201ENSMUST00000158974 126 ntBASIC3.1□□□□□ -1.91
Col8a1Q00780 Krtap27-1-201ENSMUST00000165580 646 ntAPPRIS P1 BASIC3.1□□□□□ -1.91
Col8a1Q00780 Gm44349-201ENSMUST00000197048 123 ntBASIC3.1□□□□□ -1.91
Col8a1Q00780 AC107864.1-201ENSMUST00000217937 496 ntBASIC3.1□□□□□ -1.91
Col8a1Q00780 AC144783.2-201ENSMUST00000219089 195 ntBASIC3.1□□□□□ -1.91
Col8a1Q00780 AC140254.1-201ENSMUST00000220063 331 ntBASIC3.1□□□□□ -1.91
Col8a1Q00780 Gm18441-201ENSMUST00000223539 617 ntBASIC3.1□□□□□ -1.91
Col8a1Q00780 AC129219.3-201ENSMUST00000223790 196 ntBASIC3.1□□□□□ -1.91
Col8a1Q00780 Gm25895-201ENSMUST00000083714 100 ntBASIC3.1□□□□□ -1.91
Col8a1Q00780 Gm26166-201ENSMUST00000083788 107 ntBASIC3.1□□□□□ -1.91
Col8a1Q00780 Mecom-203ENSMUST00000108271 3851 ntAPPRIS ALT2 TSL 1 (best) BASIC3.1□□□□□ -1.91
Col8a1Q00780 Olfr392-201ENSMUST00000118463 3643 ntAPPRIS P1 TSL 2 BASIC3.1□□□□□ -1.91
Col8a1Q00780 Olfr347-202ENSMUST00000216882 3385 ntAPPRIS P1 TSL 5 BASIC3.1□□□□□ -1.91
Col8a1Q00780 Fancb-201ENSMUST00000057150 2422 ntAPPRIS ALT2 TSL 5 BASIC3.1□□□□□ -1.91
Col8a1Q00780 Gm37298-201ENSMUST00000193770 3868 ntBASIC3.1□□□□□ -1.91
Col8a1Q00780 Olfr476-202ENSMUST00000217173 2539 ntAPPRIS P1 TSL 5 BASIC3.1□□□□□ -1.91
Col8a1Q00780 Cngb3-201ENSMUST00000102999 4708 ntAPPRIS P1 TSL 1 (best) BASIC3.1□□□□□ -1.91
Col8a1Q00780 Olfr1255-202ENSMUST00000214508 2253 ntAPPRIS P1 TSL 5 BASIC3.09□□□□□ -1.91
Col8a1Q00780 Olfr853-202ENSMUST00000213834 3888 ntAPPRIS P1 TSL 5 BASIC3.09□□□□□ -1.91
Col8a1Q00780 Gm26696-201ENSMUST00000181941 2848 ntBASIC3.09□□□□□ -1.91
Col8a1Q00780 Olfr1469-202ENSMUST00000216910 4106 ntAPPRIS P1 TSL 5 BASIC3.09□□□□□ -1.91
Col8a1Q00780 Gm14636-202ENSMUST00000150801 5060 ntTSL 1 (best) BASIC3.09□□□□□ -1.91
Col8a1Q00780 Ighv16-1-201ENSMUST00000103470 299 ntAPPRIS P1 BASIC3.09□□□□□ -1.91
Col8a1Q00780 Gm15936-201ENSMUST00000118706 460 ntBASIC3.09□□□□□ -1.91
Col8a1Q00780 Gm26020-201ENSMUST00000122729 183 ntBASIC3.09□□□□□ -1.91
Retrieved 100 of 76,532 protein–RNA pairs in 81.1 ms