Protein–RNA interactions for Protein: P86448

Trim43b, Tripartite motif-containing protein 43B, mousemouse

Predictions only

Length 445 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim43bP86448 Gm27588-201ENSMUST00000185096 263 ntBASIC1.45□□□□□ -2.18
Trim43bP86448 Gm42509-201ENSMUST00000197390 781 ntBASIC1.45□□□□□ -2.18
Trim43bP86448 Gm45116-201ENSMUST00000207392 275 ntBASIC1.45□□□□□ -2.18
Trim43bP86448 AC069561.2-201ENSMUST00000217596 420 ntBASIC1.45□□□□□ -2.18
Trim43bP86448 AC147240.1-201ENSMUST00000218767 431 ntBASIC1.45□□□□□ -2.18
Trim43bP86448 AC154521.1-201ENSMUST00000222635 330 ntBASIC1.45□□□□□ -2.18
Trim43bP86448 Gm45941-202ENSMUST00000223144 389 ntTSL 2 BASIC1.45□□□□□ -2.18
Trim43bP86448 Stfa2l1-201ENSMUST00000079184 414 ntAPPRIS P1 TSL 1 (best) BASIC1.45□□□□□ -2.18
Trim43bP86448 n-R5s37-201ENSMUST00000082533 118 ntBASIC1.45□□□□□ -2.18
Trim43bP86448 Gm22620-201ENSMUST00000082700 133 ntBASIC1.45□□□□□ -2.18
Trim43bP86448 Vmn1r75-205ENSMUST00000228268 4376 ntAPPRIS ALT2 BASIC1.45□□□□□ -2.18
Trim43bP86448 Ighv3-1-201ENSMUST00000103478 350 ntAPPRIS P1 BASIC1.44□□□□□ -2.18
Trim43bP86448 Gm12584-201ENSMUST00000117109 1105 ntBASIC1.44□□□□□ -2.18
Trim43bP86448 Gm14793-201ENSMUST00000118739 311 ntBASIC1.44□□□□□ -2.18
Trim43bP86448 Gm12304-201ENSMUST00000120312 385 ntBASIC1.44□□□□□ -2.18
Trim43bP86448 Gm22559-201ENSMUST00000157329 134 ntBASIC1.44□□□□□ -2.18
Trim43bP86448 Olfr733-201ENSMUST00000163469 994 ntAPPRIS P1 BASIC1.44□□□□□ -2.18
Trim43bP86448 Gm24168-201ENSMUST00000178825 107 ntBASIC1.44□□□□□ -2.18
Trim43bP86448 Gm18356-201ENSMUST00000185677 623 ntBASIC1.44□□□□□ -2.18
Trim43bP86448 Gm28595-201ENSMUST00000186223 437 ntTSL 5 BASIC1.44□□□□□ -2.18
Trim43bP86448 Gm43510-201ENSMUST00000197922 353 ntBASIC1.44□□□□□ -2.18
Trim43bP86448 Gm35077-201ENSMUST00000204999 275 ntTSL 3 BASIC1.44□□□□□ -2.18
Trim43bP86448 Gm39231-201ENSMUST00000209813 501 ntTSL 5 BASIC1.44□□□□□ -2.18
Trim43bP86448 Gm2628-201ENSMUST00000218019 426 ntBASIC1.44□□□□□ -2.18
Trim43bP86448 AC158606.1-201ENSMUST00000220078 325 ntBASIC1.44□□□□□ -2.18
Trim43bP86448 Tas2r107-201ENSMUST00000065781 1032 ntAPPRIS P1 BASIC1.44□□□□□ -2.18
Trim43bP86448 Gm10719-201ENSMUST00000099047 681 ntAPPRIS P5 TSL 5 BASIC1.44□□□□□ -2.18
Trim43bP86448 Olfr1044-202ENSMUST00000215171 3266 ntAPPRIS P1 TSL 5 BASIC1.44□□□□□ -2.18
Trim43bP86448 Mir223-201ENSMUST00000102112 110 ntBASIC1.43□□□□□ -2.18
Trim43bP86448 Gm26080-201ENSMUST00000104069 131 ntBASIC1.43□□□□□ -2.18
Trim43bP86448 Gm25541-201ENSMUST00000116888 126 ntBASIC1.43□□□□□ -2.18
Trim43bP86448 Olfr379-ps1-201ENSMUST00000117349 934 ntAPPRIS P1 BASIC1.43□□□□□ -2.18
Trim43bP86448 Gm12351-201ENSMUST00000118727 292 ntBASIC1.43□□□□□ -2.18
Trim43bP86448 Gm14785-201ENSMUST00000120185 539 ntBASIC1.43□□□□□ -2.18
Trim43bP86448 Gm26102-201ENSMUST00000157251 284 ntBASIC1.43□□□□□ -2.18
Trim43bP86448 Gm24241-201ENSMUST00000157787 145 ntBASIC1.43□□□□□ -2.18
Trim43bP86448 Gm23352-201ENSMUST00000158428 64 ntBASIC1.43□□□□□ -2.18
Trim43bP86448 Gm22668-201ENSMUST00000158716 260 ntBASIC1.43□□□□□ -2.18
Trim43bP86448 Gm24885-201ENSMUST00000158783 270 ntBASIC1.43□□□□□ -2.18
Trim43bP86448 Gm17542-201ENSMUST00000169859 99 ntAPPRIS P1 TSL 5 BASIC1.43□□□□□ -2.18
Trim43bP86448 Gm17535-201ENSMUST00000178641 672 ntAPPRIS P1 TSL 5 BASIC1.43□□□□□ -2.18
Trim43bP86448 Snord116l12-201ENSMUST00000179816 94 ntBASIC1.43□□□□□ -2.18
Trim43bP86448 Gm9022-202ENSMUST00000183285 483 ntBASIC1.43□□□□□ -2.18
Trim43bP86448 Ranbp2-ps3-201ENSMUST00000183549 388 ntBASIC1.43□□□□□ -2.18
Trim43bP86448 Gm21064-202ENSMUST00000190583 278 ntBASIC1.43□□□□□ -2.18
Trim43bP86448 Gm28926-201ENSMUST00000191063 680 ntBASIC1.43□□□□□ -2.18
Trim43bP86448 Olfr192-203ENSMUST00000206214 1054 ntAPPRIS P1 TSL 5 BASIC1.43□□□□□ -2.18
Trim43bP86448 Gm44644-201ENSMUST00000207994 642 ntTSL 3 BASIC1.43□□□□□ -2.18
Trim43bP86448 AC120553.1-201ENSMUST00000227313 260 ntBASIC1.43□□□□□ -2.18
Trim43bP86448 Gm24045-201ENSMUST00000083113 98 ntBASIC1.43□□□□□ -2.18
Trim43bP86448 Gm10360-201ENSMUST00000097219 272 ntBASIC1.43□□□□□ -2.18
Trim43bP86448 Gm10717-202ENSMUST00000099042 669 ntAPPRIS P5 TSL 5 BASIC1.43□□□□□ -2.18
Trim43bP86448 Lipi-201ENSMUST00000062721 2082 ntAPPRIS P1 TSL 1 (best) BASIC1.43□□□□□ -2.18
Trim43bP86448 Gm22831-201ENSMUST00000102473 109 ntBASIC1.42□□□□□ -2.18
Trim43bP86448 Gm22678-201ENSMUST00000116974 101 ntBASIC1.42□□□□□ -2.18
Trim43bP86448 Gm13601-201ENSMUST00000142314 404 ntTSL 3 BASIC1.42□□□□□ -2.18
Trim43bP86448 Gm23558-201ENSMUST00000157823 80 ntBASIC1.42□□□□□ -2.18
Trim43bP86448 Gm25012-201ENSMUST00000158396 164 ntBASIC1.42□□□□□ -2.18
Trim43bP86448 Gm25831-201ENSMUST00000158924 163 ntBASIC1.42□□□□□ -2.18
Trim43bP86448 Mir28b-201ENSMUST00000175399 80 ntBASIC1.42□□□□□ -2.18
Trim43bP86448 Gm25035-201ENSMUST00000175414 77 ntBASIC1.42□□□□□ -2.18
Trim43bP86448 Gm25457-201ENSMUST00000179509 107 ntBASIC1.42□□□□□ -2.18
Trim43bP86448 Gm23144-201ENSMUST00000180226 107 ntBASIC1.42□□□□□ -2.18
Trim43bP86448 Gm23862-201ENSMUST00000180342 94 ntBASIC1.42□□□□□ -2.18
Trim43bP86448 1700019A02Rik-202ENSMUST00000190748 726 ntAPPRIS ALT2 TSL 3 BASIC1.42□□□□□ -2.18
Trim43bP86448 Gm37361-201ENSMUST00000194345 132 ntBASIC1.42□□□□□ -2.18
Trim43bP86448 Gm35212-201ENSMUST00000196672 606 ntBASIC1.42□□□□□ -2.18
Trim43bP86448 AC147560.1-201ENSMUST00000197528 107 ntBASIC1.42□□□□□ -2.18
Trim43bP86448 Gm44564-201ENSMUST00000207985 180 ntBASIC1.42□□□□□ -2.18
Trim43bP86448 Gm45658-201ENSMUST00000209197 580 ntBASIC1.42□□□□□ -2.18
Trim43bP86448 Calml4-204ENSMUST00000214633 394 ntTSL 3 BASIC1.42□□□□□ -2.18
Trim43bP86448 Gm18774-201ENSMUST00000218269 601 ntBASIC1.42□□□□□ -2.18
Trim43bP86448 Gm22062-201ENSMUST00000082563 107 ntBASIC1.42□□□□□ -2.18
Trim43bP86448 Gm25698-201ENSMUST00000082897 107 ntBASIC1.42□□□□□ -2.18
Trim43bP86448 AC153950.1-201ENSMUST00000219916 3238 ntBASIC1.41□□□□□ -2.18
Trim43bP86448 Gm14638-201ENSMUST00000121338 216 ntBASIC1.41□□□□□ -2.18
Trim43bP86448 Gm26424-201ENSMUST00000122530 104 ntBASIC1.41□□□□□ -2.18
Trim43bP86448 Dnal1-203ENSMUST00000136159 403 ntTSL 5 BASIC1.41□□□□□ -2.18
Trim43bP86448 Gm12869-201ENSMUST00000156265 344 ntTSL 2 BASIC1.41□□□□□ -2.18
Trim43bP86448 Gm23829-201ENSMUST00000157392 270 ntBASIC1.41□□□□□ -2.18
Trim43bP86448 Gm23124-201ENSMUST00000157650 107 ntBASIC1.41□□□□□ -2.18
Trim43bP86448 Gm43680-201ENSMUST00000199466 340 ntBASIC1.41□□□□□ -2.18
Trim43bP86448 Gm17906-201ENSMUST00000202480 901 ntBASIC1.41□□□□□ -2.18
Trim43bP86448 AC158597.1-201ENSMUST00000216234 150 ntBASIC1.41□□□□□ -2.18
Trim43bP86448 AC166830.2-201ENSMUST00000225821 196 ntBASIC1.41□□□□□ -2.18
Trim43bP86448 Mir410-201ENSMUST00000083563 81 ntBASIC1.41□□□□□ -2.18
Trim43bP86448 Mir10a-201ENSMUST00000083585 110 ntBASIC1.41□□□□□ -2.18
Trim43bP86448 Gm42639-201ENSMUST00000197061 1871 ntBASIC1.4□□□□□ -2.19
Trim43bP86448 Igkv4-63-201ENSMUST00000103351 286 ntAPPRIS P1 BASIC1.4□□□□□ -2.19
Trim43bP86448 Clec1b-202ENSMUST00000112079 455 ntTSL 1 (best) BASIC1.4□□□□□ -2.19
Trim43bP86448 Gm15077-201ENSMUST00000122344 362 ntBASIC1.4□□□□□ -2.19
Trim43bP86448 Nell1os-202ENSMUST00000136672 491 ntTSL 5 BASIC1.4□□□□□ -2.19
Trim43bP86448 Gm25413-201ENSMUST00000158544 312 ntBASIC1.4□□□□□ -2.19
Trim43bP86448 Smim9-203ENSMUST00000165080 414 ntAPPRIS P1 TSL 3 BASIC1.4□□□□□ -2.19
Trim43bP86448 Gm7953-201ENSMUST00000168278 469 ntBASIC1.4□□□□□ -2.19
Trim43bP86448 Gm24573-201ENSMUST00000175499 112 ntBASIC1.4□□□□□ -2.19
Trim43bP86448 Gm28054-201ENSMUST00000187280 872 ntTSL 3 BASIC1.4□□□□□ -2.19
Trim43bP86448 Gm29013-201ENSMUST00000187431 237 ntBASIC1.4□□□□□ -2.19
Trim43bP86448 Gm19123-201ENSMUST00000190716 651 ntBASIC1.4□□□□□ -2.19
Trim43bP86448 AC153968.2-201ENSMUST00000215579 1140 ntBASIC1.4□□□□□ -2.19
Retrieved 100 of 76,532 protein–RNA pairs in 91.9 ms