Protein–RNA interactions for Protein: P79621

Ciita, MHC class II transactivator, mousemouse

Predictions only

Length 1,155 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CiitaP79621 AC129017.1-201ENSMUST00000228363 270 ntBASIC2.53□□□□□ -2
CiitaP79621 Gm25632-201ENSMUST00000083112 85 ntBASIC2.53□□□□□ -2
CiitaP79621 Gm24698-201ENSMUST00000083883 130 ntBASIC2.53□□□□□ -2
CiitaP79621 Klra3-201ENSMUST00000088017 984 ntAPPRIS P1 TSL 1 (best) BASIC2.53□□□□□ -2
CiitaP79621 Gm12580-201ENSMUST00000127456 1751 ntTSL 1 (best) BASIC2.53□□□□□ -2
CiitaP79621 Vmn1r78-202ENSMUST00000228244 7931 ntAPPRIS P1 BASIC2.53□□□□□ -2
CiitaP79621 Gm18360-201ENSMUST00000173327 1524 ntBASIC2.52□□□□□ -2.01
CiitaP79621 Tlr8-202ENSMUST00000112170 3431 ntAPPRIS P1 TSL 2 BASIC2.52□□□□□ -2.01
CiitaP79621 Gm1980-201ENSMUST00000123131 2306 ntBASIC2.52□□□□□ -2.01
CiitaP79621 Gm26154-201ENSMUST00000102339 96 ntBASIC2.52□□□□□ -2.01
CiitaP79621 Gm24172-201ENSMUST00000104127 117 ntBASIC2.52□□□□□ -2.01
CiitaP79621 Snord98-201ENSMUST00000116819 65 ntBASIC2.52□□□□□ -2.01
CiitaP79621 Gm13457-201ENSMUST00000117885 267 ntBASIC2.52□□□□□ -2.01
CiitaP79621 Gm12304-201ENSMUST00000120312 385 ntBASIC2.52□□□□□ -2.01
CiitaP79621 Gm14269-201ENSMUST00000120455 306 ntBASIC2.52□□□□□ -2.01
CiitaP79621 Gm13625-201ENSMUST00000149283 480 ntTSL 5 BASIC2.52□□□□□ -2.01
CiitaP79621 Gm25970-201ENSMUST00000157165 86 ntBASIC2.52□□□□□ -2.01
CiitaP79621 Gm16561-201ENSMUST00000163001 192 ntBASIC2.52□□□□□ -2.01
CiitaP79621 Gm23191-201ENSMUST00000179147 107 ntBASIC2.52□□□□□ -2.01
CiitaP79621 Gm21978-201ENSMUST00000179696 377 ntBASIC2.52□□□□□ -2.01
CiitaP79621 Mir378a-201ENSMUST00000198300 66 ntBASIC2.52□□□□□ -2.01
CiitaP79621 Gm43626-201ENSMUST00000198575 162 ntBASIC2.52□□□□□ -2.01
CiitaP79621 Mir497-201ENSMUST00000200557 84 ntBASIC2.52□□□□□ -2.01
CiitaP79621 Gm35077-201ENSMUST00000204999 275 ntTSL 3 BASIC2.52□□□□□ -2.01
CiitaP79621 Tnfrsf23-203ENSMUST00000208017 544 ntTSL 3 BASIC2.52□□□□□ -2.01
CiitaP79621 Gm45375-201ENSMUST00000210338 280 ntBASIC2.52□□□□□ -2.01
CiitaP79621 AC093316.2-201ENSMUST00000220015 172 ntTSL 5 BASIC2.52□□□□□ -2.01
CiitaP79621 AC133517.1-203ENSMUST00000225570 390 ntBASIC2.52□□□□□ -2.01
CiitaP79621 Gm25579-201ENSMUST00000083407 106 ntBASIC2.52□□□□□ -2.01
CiitaP79621 Gm26015-201ENSMUST00000104402 125 ntBASIC2.51□□□□□ -2.01
CiitaP79621 Cypt14-201ENSMUST00000179096 508 ntAPPRIS P1 TSL 1 (best) BASIC2.51□□□□□ -2.01
CiitaP79621 Gm25121-201ENSMUST00000179846 79 ntBASIC2.51□□□□□ -2.01
CiitaP79621 Gm26936-201ENSMUST00000182424 382 ntTSL 1 (best) BASIC2.51□□□□□ -2.01
CiitaP79621 Gm27399-201ENSMUST00000184250 78 ntBASIC2.51□□□□□ -2.01
CiitaP79621 Gm40040-202ENSMUST00000196337 305 ntTSL 3 BASIC2.51□□□□□ -2.01
CiitaP79621 Gm44477-201ENSMUST00000199661 110 ntBASIC2.51□□□□□ -2.01
CiitaP79621 Gm44844-201ENSMUST00000207242 336 ntBASIC2.51□□□□□ -2.01
CiitaP79621 Gm45315-201ENSMUST00000209283 333 ntBASIC2.51□□□□□ -2.01
CiitaP79621 AC166358.7-201ENSMUST00000221132 108 ntBASIC2.51□□□□□ -2.01
CiitaP79621 AC125543.5-201ENSMUST00000222799 108 ntBASIC2.51□□□□□ -2.01
CiitaP79621 AC117202.2-201ENSMUST00000226491 1101 ntBASIC2.51□□□□□ -2.01
CiitaP79621 Gm23627-201ENSMUST00000082459 107 ntBASIC2.51□□□□□ -2.01
CiitaP79621 Gm22502-201ENSMUST00000082488 107 ntBASIC2.51□□□□□ -2.01
CiitaP79621 Gm22977-201ENSMUST00000082615 107 ntBASIC2.51□□□□□ -2.01
CiitaP79621 Gm24149-201ENSMUST00000082757 107 ntBASIC2.51□□□□□ -2.01
CiitaP79621 Trdn-201ENSMUST00000095762 4514 ntAPPRIS P2 TSL 5 BASIC2.51□□□□□ -2.01
CiitaP79621 Olfr1496-202ENSMUST00000209137 2394 ntAPPRIS ALT1 TSL 5 BASIC2.51□□□□□ -2.01
CiitaP79621 Olfr807-203ENSMUST00000217106 1788 ntAPPRIS P1 TSL 5 BASIC2.51□□□□□ -2.01
CiitaP79621 Gm44133-202ENSMUST00000204450 2586 ntBASIC2.51□□□□□ -2.01
CiitaP79621 AC125374.3-201ENSMUST00000214983 2810 ntBASIC2.5□□□□□ -2.01
CiitaP79621 Gm37761-201ENSMUST00000194989 2098 ntBASIC2.5□□□□□ -2.01
CiitaP79621 Gm13212-202ENSMUST00000105739 3595 ntAPPRIS P1 TSL 5 BASIC2.5□□□□□ -2.01
CiitaP79621 Gm12162-202ENSMUST00000129432 127 ntTSL 5 BASIC2.5□□□□□ -2.01
CiitaP79621 Gm25961-201ENSMUST00000157174 135 ntBASIC2.5□□□□□ -2.01
CiitaP79621 Gm22517-201ENSMUST00000158265 136 ntBASIC2.5□□□□□ -2.01
CiitaP79621 Gm23005-201ENSMUST00000158950 136 ntBASIC2.5□□□□□ -2.01
CiitaP79621 Obox4-ps34-201ENSMUST00000175879 520 ntBASIC2.5□□□□□ -2.01
CiitaP79621 Sult2a6-202ENSMUST00000184731 664 ntTSL 1 (best) BASIC2.5□□□□□ -2.01
CiitaP79621 Gm28951-201ENSMUST00000190742 313 ntBASIC2.5□□□□□ -2.01
CiitaP79621 Gm32033-201ENSMUST00000193483 339 ntBASIC2.5□□□□□ -2.01
CiitaP79621 Gm45445-201ENSMUST00000209586 232 ntBASIC2.5□□□□□ -2.01
CiitaP79621 Gm40810-201ENSMUST00000219149 253 ntBASIC2.5□□□□□ -2.01
CiitaP79621 Gm45815-201ENSMUST00000220241 146 ntBASIC2.5□□□□□ -2.01
CiitaP79621 1700030L22Rik-201ENSMUST00000221214 567 ntTSL 5 BASIC2.5□□□□□ -2.01
CiitaP79621 Defb21-201ENSMUST00000070722 427 ntAPPRIS P1 TSL 1 (best) BASIC2.5□□□□□ -2.01
CiitaP79621 Pip-201ENSMUST00000075351 588 ntAPPRIS P1 TSL 1 (best) BASIC2.5□□□□□ -2.01
CiitaP79621 Olfr822-201ENSMUST00000080460 942 ntAPPRIS P1 BASIC2.5□□□□□ -2.01
CiitaP79621 Gm24623-201ENSMUST00000082616 194 ntBASIC2.5□□□□□ -2.01
CiitaP79621 Olfr814-202ENSMUST00000213742 3798 ntAPPRIS P1 TSL 5 BASIC2.5□□□□□ -2.01
CiitaP79621 Gm37598-201ENSMUST00000194506 1301 ntBASIC2.49□□□□□ -2.01
CiitaP79621 Ppp1r3a-201ENSMUST00000045096 6965 ntAPPRIS P1 TSL 1 (best) BASIC2.49□□□□□ -2.01
CiitaP79621 Traj6-201ENSMUST00000103734 62 ntAPPRIS P1 BASIC2.49□□□□□ -2.01
CiitaP79621 Gm26396-201ENSMUST00000104093 132 ntBASIC2.49□□□□□ -2.01
CiitaP79621 Gm7164-201ENSMUST00000117503 450 ntBASIC2.49□□□□□ -2.01
CiitaP79621 Gm13672-201ENSMUST00000117554 459 ntBASIC2.49□□□□□ -2.01
CiitaP79621 Cox20-ps-201ENSMUST00000119872 353 ntBASIC2.49□□□□□ -2.01
CiitaP79621 Gm14402-201ENSMUST00000122217 508 ntBASIC2.49□□□□□ -2.01
CiitaP79621 4930511O05Rik-201ENSMUST00000155912 391 ntTSL 1 (best) BASIC2.49□□□□□ -2.01
CiitaP79621 Gm24810-201ENSMUST00000175317 70 ntBASIC2.49□□□□□ -2.01
CiitaP79621 Mir6355-201ENSMUST00000183687 106 ntBASIC2.49□□□□□ -2.01
CiitaP79621 Gm29322-201ENSMUST00000185378 582 ntTSL 5 BASIC2.49□□□□□ -2.01
CiitaP79621 Gm21858-202ENSMUST00000185713 923 ntAPPRIS P1 TSL 1 (best) BASIC2.49□□□□□ -2.01
CiitaP79621 Gm21409-201ENSMUST00000186110 923 ntAPPRIS P1 TSL 1 (best) BASIC2.49□□□□□ -2.01
CiitaP79621 Gm28961-201ENSMUST00000190573 923 ntAPPRIS P1 TSL 1 (best) BASIC2.49□□□□□ -2.01
CiitaP79621 Gm37054-201ENSMUST00000193481 543 ntBASIC2.49□□□□□ -2.01
CiitaP79621 Trbv18-201ENSMUST00000194256 294 ntBASIC2.49□□□□□ -2.01
CiitaP79621 Gm43669-201ENSMUST00000198229 436 ntBASIC2.49□□□□□ -2.01
CiitaP79621 Gm43587-201ENSMUST00000199590 204 ntBASIC2.49□□□□□ -2.01
CiitaP79621 Gm43472-201ENSMUST00000200175 154 ntBASIC2.49□□□□□ -2.01
CiitaP79621 Serf1-201ENSMUST00000022145 601 ntAPPRIS P1 TSL 1 (best) BASIC2.49□□□□□ -2.01
CiitaP79621 AC164297.3-201ENSMUST00000224238 94 ntBASIC2.49□□□□□ -2.01
CiitaP79621 Gm22866-201ENSMUST00000083947 177 ntBASIC2.49□□□□□ -2.01
CiitaP79621 Thoc2-201ENSMUST00000047037 7622 ntAPPRIS P1 TSL 5 BASIC2.49□□□□□ -2.01
CiitaP79621 Gm24049-201ENSMUST00000102409 100 ntBASIC2.48□□□□□ -2.01
CiitaP79621 Igkv5-39-201ENSMUST00000103370 287 ntAPPRIS P1 BASIC2.48□□□□□ -2.01
CiitaP79621 Gm12646-201ENSMUST00000119144 238 ntBASIC2.48□□□□□ -2.01
CiitaP79621 Gm23980-201ENSMUST00000157135 158 ntBASIC2.48□□□□□ -2.01
CiitaP79621 Gm22654-201ENSMUST00000157874 105 ntBASIC2.48□□□□□ -2.01
CiitaP79621 Gm25457-201ENSMUST00000179509 107 ntBASIC2.48□□□□□ -2.01
CiitaP79621 Gm38109-201ENSMUST00000195386 181 ntBASIC2.48□□□□□ -2.01
Retrieved 100 of 76,532 protein–RNA pairs in 88.4 ms