Protein–RNA interactions for Protein: P53564

Cux1, Homeobox protein cut-like 1, mousemouse

Predictions only

Length 1,515 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cux1P53564 Mir3057-201ENSMUST00000175040 91 ntBASIC0.88□□□□□ -2.27
Cux1P53564 Trav7d-4-201ENSMUST00000178768 451 ntAPPRIS P1 BASIC0.88□□□□□ -2.27
Cux1P53564 Gm14596-201ENSMUST00000180268 537 ntBASIC0.88□□□□□ -2.27
Cux1P53564 Gm14595-201ENSMUST00000180335 537 ntBASIC0.88□□□□□ -2.27
Cux1P53564 Trav7-4-201ENSMUST00000181728 451 ntAPPRIS P1 BASIC0.88□□□□□ -2.27
Cux1P53564 Ppp4r3c-ps-201ENSMUST00000151416 2445 ntBASIC0.87□□□□□ -2.27
Cux1P53564 Gm12636-201ENSMUST00000117395 624 ntBASIC0.87□□□□□ -2.27
Cux1P53564 Gm6664-201ENSMUST00000119138 468 ntBASIC0.87□□□□□ -2.27
Cux1P53564 Gm15878-201ENSMUST00000127561 306 ntBASIC0.87□□□□□ -2.27
Cux1P53564 Gm23466-201ENSMUST00000157133 106 ntBASIC0.87□□□□□ -2.27
Cux1P53564 Vmn2r-ps73-201ENSMUST00000173890 1194 ntBASIC0.87□□□□□ -2.27
Cux1P53564 Gm20477-201ENSMUST00000174028 280 ntBASIC0.87□□□□□ -2.27
Cux1P53564 Vmn2r-ps70-201ENSMUST00000174636 302 ntBASIC0.87□□□□□ -2.27
Cux1P53564 Gm24969-201ENSMUST00000180331 79 ntBASIC0.87□□□□□ -2.27
Cux1P53564 Gm44654-201ENSMUST00000208052 329 ntBASIC0.87□□□□□ -2.27
Cux1P53564 Gm18729-201ENSMUST00000217230 621 ntBASIC0.87□□□□□ -2.27
Cux1P53564 Gm19441-201ENSMUST00000221545 330 ntBASIC0.87□□□□□ -2.27
Cux1P53564 AC122242.1-201ENSMUST00000224650 304 ntBASIC0.87□□□□□ -2.27
Cux1P53564 AC135292.1-201ENSMUST00000227665 204 ntBASIC0.87□□□□□ -2.27
Cux1P53564 Gm24208-201ENSMUST00000082783 135 ntBASIC0.87□□□□□ -2.27
Cux1P53564 Snord118-201ENSMUST00000082965 135 ntBASIC0.87□□□□□ -2.27
Cux1P53564 Gm23691-201ENSMUST00000101878 107 ntBASIC0.86□□□□□ -2.27
Cux1P53564 Olfr1094-201ENSMUST00000105211 1147 ntAPPRIS P1 BASIC0.86□□□□□ -2.27
Cux1P53564 Gm22091-201ENSMUST00000116908 127 ntBASIC0.86□□□□□ -2.27
Cux1P53564 Gm13885-201ENSMUST00000117569 187 ntBASIC0.86□□□□□ -2.27
Cux1P53564 Gm21726-201ENSMUST00000179654 392 ntBASIC0.86□□□□□ -2.27
Cux1P53564 Gm16399-201ENSMUST00000181423 219 ntBASIC0.86□□□□□ -2.27
Cux1P53564 Obox4-ps2-201ENSMUST00000185088 442 ntBASIC0.86□□□□□ -2.27
Cux1P53564 Gm28434-201ENSMUST00000187738 500 ntAPPRIS P1 TSL 5 BASIC0.86□□□□□ -2.27
Cux1P53564 AC188459.1-201ENSMUST00000216651 300 ntBASIC0.86□□□□□ -2.27
Cux1P53564 Gm22062-201ENSMUST00000082563 107 ntBASIC0.86□□□□□ -2.27
Cux1P53564 Vmn2r-ps82-201ENSMUST00000174222 1641 ntBASIC0.86□□□□□ -2.27
Cux1P53564 Gm22048-201ENSMUST00000104721 89 ntBASIC0.85□□□□□ -2.27
Cux1P53564 Rhox11-ps2-201ENSMUST00000117962 451 ntBASIC0.85□□□□□ -2.27
Cux1P53564 Gm11389-201ENSMUST00000121407 430 ntBASIC0.85□□□□□ -2.27
Cux1P53564 Gm24381-201ENSMUST00000122697 104 ntBASIC0.85□□□□□ -2.27
Cux1P53564 Lce6a-201ENSMUST00000138403 795 ntAPPRIS P1 TSL 5 BASIC0.85□□□□□ -2.27
Cux1P53564 Gm25423-201ENSMUST00000157609 107 ntBASIC0.85□□□□□ -2.27
Cux1P53564 Mir1967-201ENSMUST00000157789 82 ntBASIC0.85□□□□□ -2.27
Cux1P53564 Gm22731-201ENSMUST00000158086 94 ntBASIC0.85□□□□□ -2.27
Cux1P53564 Vmn2r-ps111-201ENSMUST00000161565 241 ntTSL 2 BASIC0.85□□□□□ -2.27
Cux1P53564 Obox3-ps7-201ENSMUST00000176465 410 ntBASIC0.85□□□□□ -2.27
Cux1P53564 Gm38006-201ENSMUST00000192421 697 ntTSL 5 BASIC0.85□□□□□ -2.27
Cux1P53564 Gm38064-201ENSMUST00000194032 444 ntTSL 3 BASIC0.85□□□□□ -2.27
Cux1P53564 Igkv2-95-1-201ENSMUST00000200279 272 ntBASIC0.85□□□□□ -2.27
Cux1P53564 AC100590.3-201ENSMUST00000219355 332 ntTSL 5 BASIC0.85□□□□□ -2.27
Cux1P53564 Gm22061-201ENSMUST00000082557 107 ntBASIC0.85□□□□□ -2.27
Cux1P53564 Mir101a-201ENSMUST00000083517 83 ntBASIC0.85□□□□□ -2.27
Cux1P53564 Mir141-201ENSMUST00000083540 72 ntBASIC0.85□□□□□ -2.27
Cux1P53564 Olfr575-201ENSMUST00000084812 957 ntBASIC0.85□□□□□ -2.27
Cux1P53564 Defb41-201ENSMUST00000088463 467 ntTSL 1 (best) BASIC0.85□□□□□ -2.27
Cux1P53564 Gm23202-201ENSMUST00000104376 129 ntBASIC0.84□□□□□ -2.27
Cux1P53564 Gm12417-201ENSMUST00000119153 403 ntBASIC0.84□□□□□ -2.27
Cux1P53564 4930518C09Rik-201ENSMUST00000172700 478 ntTSL 1 (best) BASIC0.84□□□□□ -2.27
Cux1P53564 CT010449.1-201ENSMUST00000220624 153 ntBASIC0.84□□□□□ -2.27
Cux1P53564 AC123062.1-201ENSMUST00000221287 481 ntBASIC0.84□□□□□ -2.27
Cux1P53564 CT025602.1-201ENSMUST00000227281 382 ntBASIC0.84□□□□□ -2.27
Cux1P53564 Gm23124-201ENSMUST00000157650 107 ntBASIC0.84□□□□□ -2.28
Cux1P53564 4930486I03Rik-201ENSMUST00000161509 788 ntTSL 1 (best) BASIC0.84□□□□□ -2.28
Cux1P53564 Gm17154-201ENSMUST00000165748 431 ntBASIC0.84□□□□□ -2.28
Cux1P53564 Gm21518-201ENSMUST00000178115 567 ntTSL 5 BASIC0.84□□□□□ -2.28
Cux1P53564 Gm20736-201ENSMUST00000178198 567 ntTSL 5 BASIC0.84□□□□□ -2.28
Cux1P53564 Gm20843-201ENSMUST00000178505 567 ntTSL 5 BASIC0.84□□□□□ -2.28
Cux1P53564 Gm21209-201ENSMUST00000178556 567 ntTSL 5 BASIC0.84□□□□□ -2.28
Cux1P53564 Gm21258-201ENSMUST00000178673 567 ntTSL 5 BASIC0.84□□□□□ -2.28
Cux1P53564 Gm20888-201ENSMUST00000178934 567 ntTSL 5 BASIC0.84□□□□□ -2.28
Cux1P53564 Gm21650-201ENSMUST00000179073 567 ntTSL 5 BASIC0.84□□□□□ -2.28
Cux1P53564 Gm20937-201ENSMUST00000180329 567 ntTSL 5 BASIC0.84□□□□□ -2.28
Cux1P53564 Mir6389-201ENSMUST00000183661 102 ntBASIC0.84□□□□□ -2.28
Cux1P53564 Gm27517-201ENSMUST00000184347 236 ntBASIC0.84□□□□□ -2.28
Cux1P53564 D030025E07Rik-205ENSMUST00000198478 418 ntTSL 3 BASIC0.84□□□□□ -2.28
Cux1P53564 Vmn1r-ps6-202ENSMUST00000202526 135 ntTSL 5 BASIC0.84□□□□□ -2.28
Cux1P53564 AC123709.1-201ENSMUST00000224848 345 ntBASIC0.84□□□□□ -2.28
Cux1P53564 Cysltr1-201ENSMUST00000064892 1059 ntAPPRIS P1 TSL 2 BASIC0.84□□□□□ -2.28
Cux1P53564 Gm26265-201ENSMUST00000083277 135 ntBASIC0.84□□□□□ -2.28
Cux1P53564 Gm23058-201ENSMUST00000093703 107 ntBASIC0.84□□□□□ -2.28
Cux1P53564 Traj26-201ENSMUST00000103715 60 ntAPPRIS P1 BASIC0.83□□□□□ -2.28
Cux1P53564 Gm22496-201ENSMUST00000104493 88 ntBASIC0.83□□□□□ -2.28
Cux1P53564 Gm23531-201ENSMUST00000104567 68 ntBASIC0.83□□□□□ -2.28
Cux1P53564 Gm11813-201ENSMUST00000118586 291 ntBASIC0.83□□□□□ -2.28
Cux1P53564 Gm14600-201ENSMUST00000121032 630 ntBASIC0.83□□□□□ -2.28
Cux1P53564 Gm15309-201ENSMUST00000121644 240 ntBASIC0.83□□□□□ -2.28
Cux1P53564 Gm14530-201ENSMUST00000122391 333 ntBASIC0.83□□□□□ -2.28
Cux1P53564 Gm23587-201ENSMUST00000157658 84 ntBASIC0.83□□□□□ -2.28
Cux1P53564 Gm27396-201ENSMUST00000157708 58 ntBASIC0.83□□□□□ -2.28
Cux1P53564 Gm22515-201ENSMUST00000158273 305 ntBASIC0.83□□□□□ -2.28
Cux1P53564 Gm25020-201ENSMUST00000178071 107 ntBASIC0.83□□□□□ -2.28
Cux1P53564 Gm25175-201ENSMUST00000178712 79 ntBASIC0.83□□□□□ -2.28
Cux1P53564 Mir7077-201ENSMUST00000183991 57 ntBASIC0.83□□□□□ -2.28
Cux1P53564 Mir3961-201ENSMUST00000198795 59 ntBASIC0.83□□□□□ -2.28
Cux1P53564 Gm18854-201ENSMUST00000211196 329 ntBASIC0.83□□□□□ -2.28
Cux1P53564 mt-Co2-201ENSMUST00000082405 684 ntAPPRIS P1 BASIC0.83□□□□□ -2.28
Cux1P53564 mt-Rnr2-201ENSMUST00000082390 1582 ntBASIC0.83□□□□□ -2.28
Cux1P53564 Gm13378-201ENSMUST00000117483 336 ntBASIC0.82□□□□□ -2.28
Cux1P53564 Gm11991-201ENSMUST00000119652 1074 ntBASIC0.82□□□□□ -2.28
Cux1P53564 Gm15130-201ENSMUST00000132464 663 ntAPPRIS P1 TSL 3 BASIC0.82□□□□□ -2.28
Cux1P53564 Gm23983-201ENSMUST00000157142 114 ntBASIC0.82□□□□□ -2.28
Cux1P53564 Gm22075-201ENSMUST00000158599 192 ntBASIC0.82□□□□□ -2.28
Cux1P53564 Rpl23a-ps12-201ENSMUST00000179178 468 ntBASIC0.82□□□□□ -2.28
Cux1P53564 Gm10267-202ENSMUST00000181652 341 ntAPPRIS P2 TSL 5 BASIC0.82□□□□□ -2.28
Retrieved 100 of 76,532 protein–RNA pairs in 95.9 ms