Protein–RNA interactions for Protein: P50431

Shmt1, Serine hydroxymethyltransferase, cytosolic, mousemouse

Predictions only

Length 478 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Shmt1P50431 Gm30146-201ENSMUST00000206564 605 ntTSL 1 (best) BASIC3.32□□□□□ -1.88
Shmt1P50431 Gm44938-201ENSMUST00000208614 427 ntBASIC3.32□□□□□ -1.88
Shmt1P50431 Gm19790-201ENSMUST00000214414 251 ntBASIC3.32□□□□□ -1.88
Shmt1P50431 AC115735.2-201ENSMUST00000227135 351 ntBASIC3.32□□□□□ -1.88
Shmt1P50431 Gm26166-201ENSMUST00000083788 107 ntBASIC3.32□□□□□ -1.88
Shmt1P50431 Gm25539-201ENSMUST00000116886 122 ntBASIC3.31□□□□□ -1.88
Shmt1P50431 Rpl36a-ps3-201ENSMUST00000120093 321 ntBASIC3.31□□□□□ -1.88
Shmt1P50431 Gm12071-201ENSMUST00000121968 469 ntBASIC3.31□□□□□ -1.88
Shmt1P50431 Gm13853-201ENSMUST00000155496 557 ntTSL 3 BASIC3.31□□□□□ -1.88
Shmt1P50431 Mir1942-201ENSMUST00000157274 63 ntBASIC3.31□□□□□ -1.88
Shmt1P50431 Gm27585-201ENSMUST00000183717 199 ntBASIC3.31□□□□□ -1.88
Shmt1P50431 Gm7329-201ENSMUST00000185915 210 ntBASIC3.31□□□□□ -1.88
Shmt1P50431 Gm28358-202ENSMUST00000189292 223 ntBASIC3.31□□□□□ -1.88
Shmt1P50431 Gm44877-201ENSMUST00000206485 274 ntTSL 5 BASIC3.31□□□□□ -1.88
Shmt1P50431 Gm5175-202ENSMUST00000219699 529 ntBASIC3.31□□□□□ -1.88
Shmt1P50431 AC154262.1-201ENSMUST00000225976 286 ntBASIC3.31□□□□□ -1.88
Shmt1P50431 Mir471-201ENSMUST00000093596 67 ntBASIC3.31□□□□□ -1.88
Shmt1P50431 Olfr652-203ENSMUST00000216131 4773 ntAPPRIS P1 TSL 5 BASIC3.31□□□□□ -1.88
Shmt1P50431 Gm21034-201ENSMUST00000207390 2608 ntBASIC3.31□□□□□ -1.88
Shmt1P50431 Vmn1r42-203ENSMUST00000227279 4138 ntAPPRIS P1 BASIC3.31□□□□□ -1.88
Shmt1P50431 Dmd-203ENSMUST00000114000 14910 ntAPPRIS P1 TSL 1 (best) BASIC3.31□□□□□ -1.88
Shmt1P50431 Nexn-207ENSMUST00000198460 1785 ntAPPRIS ALT2 TSL 5 BASIC3.3□□□□□ -1.88
Shmt1P50431 Dst-211ENSMUST00000183034 23201 ntAPPRIS ALT2 TSL 5 BASIC3.3□□□□□ -1.88
Shmt1P50431 Gm16032-201ENSMUST00000118534 168 ntBASIC3.3□□□□□ -1.88
Shmt1P50431 Gm3848-202ENSMUST00000151564 301 ntTSL 3 BASIC3.3□□□□□ -1.88
Shmt1P50431 Gm24061-201ENSMUST00000157489 120 ntBASIC3.3□□□□□ -1.88
Shmt1P50431 Gm25834-201ENSMUST00000158916 101 ntBASIC3.3□□□□□ -1.88
Shmt1P50431 Gm24308-201ENSMUST00000177773 114 ntBASIC3.3□□□□□ -1.88
Shmt1P50431 Gm22450-201ENSMUST00000179641 107 ntBASIC3.3□□□□□ -1.88
Shmt1P50431 Gm25024-201ENSMUST00000179667 104 ntBASIC3.3□□□□□ -1.88
Shmt1P50431 Gm25473-201ENSMUST00000180191 107 ntBASIC3.3□□□□□ -1.88
Shmt1P50431 Gm27520-201ENSMUST00000184872 81 ntBASIC3.3□□□□□ -1.88
Shmt1P50431 Mir6540-201ENSMUST00000184886 108 ntBASIC3.3□□□□□ -1.88
Shmt1P50431 Gm18982-201ENSMUST00000198118 529 ntBASIC3.3□□□□□ -1.88
Shmt1P50431 Vmn1r-ps16-201ENSMUST00000204747 105 ntBASIC3.3□□□□□ -1.88
Shmt1P50431 Gm44964-201ENSMUST00000207011 273 ntBASIC3.3□□□□□ -1.88
Shmt1P50431 Gm45778-201ENSMUST00000211959 153 ntBASIC3.3□□□□□ -1.88
Shmt1P50431 Gm31447-201ENSMUST00000222345 384 ntTSL 3 BASIC3.3□□□□□ -1.88
Shmt1P50431 Gm26071-201ENSMUST00000083261 107 ntBASIC3.3□□□□□ -1.88
Shmt1P50431 Gm25651-201ENSMUST00000083782 119 ntBASIC3.3□□□□□ -1.88
Shmt1P50431 Gm24521-201ENSMUST00000083958 107 ntBASIC3.3□□□□□ -1.88
Shmt1P50431 Gm10719-202ENSMUST00000099049 675 ntAPPRIS ALT2 TSL 5 BASIC3.3□□□□□ -1.88
Shmt1P50431 Vmn1r80-205ENSMUST00000227755 10455 ntAPPRIS P1 BASIC3.3□□□□□ -1.88
Shmt1P50431 Gm43016-201ENSMUST00000196628 3150 ntTSL 1 (best) BASIC3.3□□□□□ -1.88
Shmt1P50431 Olfr679-204ENSMUST00000215704 5018 ntAPPRIS P1 TSL 5 BASIC3.3□□□□□ -1.88
Shmt1P50431 Olfr346-202ENSMUST00000213258 4104 ntAPPRIS P1 TSL 5 BASIC3.29□□□□□ -1.88
Shmt1P50431 Vmn1r45-208ENSMUST00000228662 3309 ntAPPRIS P1 BASIC3.29□□□□□ -1.88
Shmt1P50431 Olfr513-202ENSMUST00000214670 2029 ntAPPRIS P1 TSL 5 BASIC3.29□□□□□ -1.88
Shmt1P50431 Gm2042-201ENSMUST00000110145 1894 ntAPPRIS P3 TSL 1 (best) BASIC3.29□□□□□ -1.88
Shmt1P50431 Gm14593-201ENSMUST00000119948 294 ntBASIC3.29□□□□□ -1.88
Shmt1P50431 Gm14782-201ENSMUST00000120151 195 ntBASIC3.29□□□□□ -1.88
Shmt1P50431 Gm22027-201ENSMUST00000122737 127 ntBASIC3.29□□□□□ -1.88
Shmt1P50431 Gm15669-201ENSMUST00000147834 526 ntTSL 3 BASIC3.29□□□□□ -1.88
Shmt1P50431 Gm22322-201ENSMUST00000157151 111 ntBASIC3.29□□□□□ -1.88
Shmt1P50431 Gm23586-201ENSMUST00000157657 123 ntBASIC3.29□□□□□ -1.88
Shmt1P50431 Gm26412-201ENSMUST00000157666 55 ntBASIC3.29□□□□□ -1.88
Shmt1P50431 Gm23219-201ENSMUST00000158123 87 ntBASIC3.29□□□□□ -1.88
Shmt1P50431 Gm24006-201ENSMUST00000158462 132 ntBASIC3.29□□□□□ -1.88
Shmt1P50431 4930473D10Rik-201ENSMUST00000161975 487 ntTSL 1 (best) BASIC3.29□□□□□ -1.88
Shmt1P50431 Mir3470b-201ENSMUST00000175563 126 ntBASIC3.29□□□□□ -1.88
Shmt1P50431 Gm24799-201ENSMUST00000178431 79 ntBASIC3.29□□□□□ -1.88
Shmt1P50431 Gm6842-201ENSMUST00000211361 390 ntBASIC3.29□□□□□ -1.88
Shmt1P50431 Gm39380-201ENSMUST00000214710 192 ntTSL 5 BASIC3.29□□□□□ -1.88
Shmt1P50431 AC159896.1-201ENSMUST00000215264 215 ntBASIC3.29□□□□□ -1.88
Shmt1P50431 AL731706.1-202ENSMUST00000226652 180 ntAPPRIS P5 BASIC3.29□□□□□ -1.88
Shmt1P50431 AC160550.3-201ENSMUST00000226818 400 ntBASIC3.29□□□□□ -1.88
Shmt1P50431 Gm7145-201ENSMUST00000185381 1794 ntAPPRIS P1 TSL 3 BASIC3.29□□□□□ -1.88
Shmt1P50431 Olfr235-203ENSMUST00000214551 2240 ntAPPRIS P1 TSL 5 BASIC3.29□□□□□ -1.88
Shmt1P50431 Olfr1402-202ENSMUST00000199297 4051 ntAPPRIS P1 TSL 5 BASIC3.29□□□□□ -1.88
Shmt1P50431 Gm37158-201ENSMUST00000191652 5704 ntBASIC3.29□□□□□ -1.88
Shmt1P50431 Gm37296-201ENSMUST00000192728 2922 ntBASIC3.29□□□□□ -1.88
Shmt1P50431 Olfr657-203ENSMUST00000215454 2397 ntAPPRIS P1 TSL 5 BASIC3.29□□□□□ -1.88
Shmt1P50431 Gm14416-201ENSMUST00000118630 2308 ntBASIC3.28□□□□□ -1.88
Shmt1P50431 Olfr1105-202ENSMUST00000215978 3012 ntAPPRIS P1 TSL 3 BASIC3.28□□□□□ -1.88
Shmt1P50431 Olfr789-201ENSMUST00000213236 4235 ntAPPRIS P1 TSL 5 BASIC3.28□□□□□ -1.88
Shmt1P50431 Kctd4-201ENSMUST00000050120 3998 ntAPPRIS P1 TSL 1 (best) BASIC3.28□□□□□ -1.88
Shmt1P50431 Gm42870-201ENSMUST00000199355 3470 ntBASIC3.28□□□□□ -1.88
Shmt1P50431 Gm25407-201ENSMUST00000104102 134 ntBASIC3.28□□□□□ -1.88
Shmt1P50431 Gm13504-201ENSMUST00000117490 316 ntBASIC3.28□□□□□ -1.88
Shmt1P50431 Gm14562-201ENSMUST00000129885 543 ntBASIC3.28□□□□□ -1.88
Shmt1P50431 Gm22321-201ENSMUST00000157152 104 ntBASIC3.28□□□□□ -1.88
Shmt1P50431 Gm22337-201ENSMUST00000157721 132 ntBASIC3.28□□□□□ -1.88
Shmt1P50431 Gm22187-201ENSMUST00000157819 129 ntBASIC3.28□□□□□ -1.88
Shmt1P50431 Gm23002-201ENSMUST00000179221 107 ntBASIC3.28□□□□□ -1.88
Shmt1P50431 Gm27476-201ENSMUST00000183366 104 ntBASIC3.28□□□□□ -1.88
Shmt1P50431 1700010I02Rik-202ENSMUST00000188525 430 ntTSL 3 BASIC3.28□□□□□ -1.88
Shmt1P50431 Gm1833-201ENSMUST00000191608 682 ntBASIC3.28□□□□□ -1.88
Shmt1P50431 Gm38238-201ENSMUST00000194334 346 ntBASIC3.28□□□□□ -1.88
Shmt1P50431 Gm9377-201ENSMUST00000207227 623 ntBASIC3.28□□□□□ -1.88
Shmt1P50431 S100z-201ENSMUST00000022186 399 ntAPPRIS P1 TSL 1 (best) BASIC3.28□□□□□ -1.88
Shmt1P50431 AC165106.2-201ENSMUST00000226749 97 ntBASIC3.28□□□□□ -1.88
Shmt1P50431 Gm9805-201ENSMUST00000055305 171 ntAPPRIS P1 BASIC3.28□□□□□ -1.88
Shmt1P50431 Gm24817-201ENSMUST00000093672 105 ntBASIC3.28□□□□□ -1.88
Shmt1P50431 Olfr1097-201ENSMUST00000111576 4705 ntAPPRIS P1 TSL 3 BASIC3.28□□□□□ -1.88
Shmt1P50431 Vmn2r71-201ENSMUST00000172338 2568 ntAPPRIS P1 TSL 5 BASIC3.27□□□□□ -1.89
Shmt1P50431 Olfr732-202ENSMUST00000213701 3862 ntAPPRIS P1 TSL 5 BASIC3.27□□□□□ -1.89
Shmt1P50431 Gm24282-201ENSMUST00000104232 66 ntBASIC3.27□□□□□ -1.89
Shmt1P50431 Gm11065-201ENSMUST00000111462 228 ntBASIC3.27□□□□□ -1.89
Shmt1P50431 Gm12793-201ENSMUST00000119268 292 ntBASIC3.27□□□□□ -1.89
Shmt1P50431 Gm14629-201ENSMUST00000122428 144 ntBASIC3.27□□□□□ -1.89
Retrieved 100 of 76,532 protein–RNA pairs in 86.9 ms