Protein–RNA interactions for Protein: P49135

Ercc3, General transcription and DNA repair factor IIH helicase subunit XPB, mousemouse

Predictions only

Length 783 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ercc3P49135 4930473D10Rik-201ENSMUST00000161975 487 ntTSL 1 (best) BASIC3.05□□□□□ -1.92
Ercc3P49135 Gm16004-201ENSMUST00000161981 311 ntTSL 5 BASIC3.05□□□□□ -1.92
Ercc3P49135 Cypt14-201ENSMUST00000179096 508 ntAPPRIS P1 TSL 1 (best) BASIC3.05□□□□□ -1.92
Ercc3P49135 Mir3068-202ENSMUST00000197755 79 ntBASIC3.05□□□□□ -1.92
Ercc3P49135 Gm44073-201ENSMUST00000204173 429 ntTSL 3 BASIC3.05□□□□□ -1.92
Ercc3P49135 Gm44555-201ENSMUST00000209008 148 ntBASIC3.05□□□□□ -1.92
Ercc3P49135 AC158606.1-201ENSMUST00000220078 325 ntBASIC3.05□□□□□ -1.92
Ercc3P49135 AC120555.1-201ENSMUST00000221020 222 ntTSL 5 BASIC3.05□□□□□ -1.92
Ercc3P49135 Olfr1496-202ENSMUST00000209137 2394 ntAPPRIS ALT1 TSL 5 BASIC3.05□□□□□ -1.92
Ercc3P49135 Gm37063-201ENSMUST00000194678 3520 ntBASIC3.05□□□□□ -1.92
Ercc3P49135 Gm23867-201ENSMUST00000122649 274 ntBASIC3.04□□□□□ -1.92
Ercc3P49135 AC154297.1-201ENSMUST00000171334 397 ntBASIC3.04□□□□□ -1.92
Ercc3P49135 Gm24816-201ENSMUST00000175311 151 ntBASIC3.04□□□□□ -1.92
Ercc3P49135 Gm21827-201ENSMUST00000178247 423 ntBASIC3.04□□□□□ -1.92
Ercc3P49135 6430573P05Rik-201ENSMUST00000192562 508 ntTSL 5 BASIC3.04□□□□□ -1.92
Ercc3P49135 Gm42716-203ENSMUST00000197140 259 ntTSL 3 BASIC3.04□□□□□ -1.92
Ercc3P49135 Gm44161-201ENSMUST00000203532 253 ntBASIC3.04□□□□□ -1.92
Ercc3P49135 Gm35077-201ENSMUST00000204999 275 ntTSL 3 BASIC3.04□□□□□ -1.92
Ercc3P49135 AC102369.1-201ENSMUST00000218415 373 ntBASIC3.04□□□□□ -1.92
Ercc3P49135 U2surp-202ENSMUST00000079659 7630 ntAPPRIS P1 TSL 1 (best) BASIC3.04□□□□□ -1.92
Ercc3P49135 Olfr1370-204ENSMUST00000215806 4322 ntAPPRIS P1 TSL 5 BASIC3.04□□□□□ -1.92
Ercc3P49135 Pak3-210ENSMUST00000172330 8135 ntAPPRIS P3 TSL 1 (best) BASIC3.04□□□□□ -1.92
Ercc3P49135 Gm650-201ENSMUST00000144428 1551 ntBASIC3.04□□□□□ -1.92
Ercc3P49135 Vmn1r76-202ENSMUST00000226300 8189 ntAPPRIS ALT2 BASIC3.03□□□□□ -1.92
Ercc3P49135 Olfr251-202ENSMUST00000214865 4930 ntAPPRIS ALT2 TSL 5 BASIC3.03□□□□□ -1.92
Ercc3P49135 Olfr138-202ENSMUST00000172843 1769 ntAPPRIS P1 TSL 2 BASIC3.03□□□□□ -1.92
Ercc3P49135 Mir92-1-201ENSMUST00000102108 80 ntBASIC3.03□□□□□ -1.92
Ercc3P49135 Gm14774-201ENSMUST00000117857 536 ntBASIC3.03□□□□□ -1.92
Ercc3P49135 Gm16349-201ENSMUST00000149990 394 ntTSL 3 BASIC3.03□□□□□ -1.92
Ercc3P49135 Gm26186-201ENSMUST00000157689 125 ntBASIC3.03□□□□□ -1.92
Ercc3P49135 Gm22434-201ENSMUST00000158549 122 ntBASIC3.03□□□□□ -1.92
Ercc3P49135 Ear-ps8-201ENSMUST00000161935 354 ntBASIC3.03□□□□□ -1.92
Ercc3P49135 Ranbp2-ps9-201ENSMUST00000184566 382 ntBASIC3.03□□□□□ -1.92
Ercc3P49135 Gm37128-201ENSMUST00000192599 232 ntBASIC3.03□□□□□ -1.92
Ercc3P49135 Gm44353-201ENSMUST00000200618 138 ntBASIC3.03□□□□□ -1.92
Ercc3P49135 AC161426.1-201ENSMUST00000214137 286 ntBASIC3.03□□□□□ -1.92
Ercc3P49135 Gm40810-201ENSMUST00000219149 253 ntBASIC3.03□□□□□ -1.92
Ercc3P49135 Gm9318-201ENSMUST00000222444 438 ntBASIC3.03□□□□□ -1.92
Ercc3P49135 Gm25801-201ENSMUST00000082638 106 ntBASIC3.03□□□□□ -1.92
Ercc3P49135 Gm26164-201ENSMUST00000083793 104 ntBASIC3.03□□□□□ -1.92
Ercc3P49135 Vmn1r29-204ENSMUST00000228038 4520 ntAPPRIS P1 BASIC3.03□□□□□ -1.92
Ercc3P49135 Olfr623-202ENSMUST00000213840 3980 ntAPPRIS P1 TSL 5 BASIC3.03□□□□□ -1.92
Ercc3P49135 Olfr830-202ENSMUST00000212723 3105 ntAPPRIS ALT2 TSL 5 BASIC3.03□□□□□ -1.92
Ercc3P49135 Olfr498-201ENSMUST00000217616 2260 ntAPPRIS P1 BASIC3.03□□□□□ -1.92
Ercc3P49135 Mir759-201ENSMUST00000103254 98 ntBASIC3.02□□□□□ -1.93
Ercc3P49135 Gm23476-201ENSMUST00000158881 274 ntBASIC3.02□□□□□ -1.93
Ercc3P49135 Bsph2-ps-201ENSMUST00000183795 241 ntBASIC3.02□□□□□ -1.93
Ercc3P49135 Gm28710-201ENSMUST00000186866 489 ntTSL 5 BASIC3.02□□□□□ -1.93
Ercc3P49135 Gm37807-201ENSMUST00000194310 190 ntBASIC3.02□□□□□ -1.93
Ercc3P49135 Trav5d-2-201ENSMUST00000196107 275 ntBASIC3.02□□□□□ -1.93
Ercc3P49135 Trav5n-2-201ENSMUST00000197136 275 ntBASIC3.02□□□□□ -1.93
Ercc3P49135 Mir7118-201ENSMUST00000197760 61 ntBASIC3.02□□□□□ -1.93
Ercc3P49135 Trav15n-3-201ENSMUST00000200498 168 ntBASIC3.02□□□□□ -1.93
Ercc3P49135 Gm44881-201ENSMUST00000205425 367 ntBASIC3.02□□□□□ -1.93
Ercc3P49135 Gm5023-201ENSMUST00000217442 587 ntBASIC3.02□□□□□ -1.93
Ercc3P49135 AC091764.1-201ENSMUST00000218029 132 ntTSL 5 BASIC3.02□□□□□ -1.93
Ercc3P49135 Gm19118-201ENSMUST00000222554 98 ntBASIC3.02□□□□□ -1.93
Ercc3P49135 AC154472.1-201ENSMUST00000222663 236 ntTSL 3 BASIC3.02□□□□□ -1.93
Ercc3P49135 Snord104-201ENSMUST00000083192 70 ntBASIC3.02□□□□□ -1.93
Ercc3P49135 Olfr165-202ENSMUST00000206110 1862 ntAPPRIS ALT1 TSL 3 BASIC3.02□□□□□ -1.93
Ercc3P49135 Olfr166-203ENSMUST00000216465 4371 ntAPPRIS P1 TSL 5 BASIC3.02□□□□□ -1.93
Ercc3P49135 Vmn1r87-202ENSMUST00000211249 1835 ntAPPRIS P1 TSL 3 BASIC3.02□□□□□ -1.93
Ercc3P49135 Olfr1107-202ENSMUST00000214049 4388 ntAPPRIS P1 TSL 5 BASIC3.01□□□□□ -1.93
Ercc3P49135 Igkv17-127-201ENSMUST00000103309 341 ntAPPRIS ALT2 BASIC3.01□□□□□ -1.93
Ercc3P49135 Igkv17-121-201ENSMUST00000103315 350 ntAPPRIS ALT2 BASIC3.01□□□□□ -1.93
Ercc3P49135 Gm22021-201ENSMUST00000104353 107 ntBASIC3.01□□□□□ -1.93
Ercc3P49135 Mir669i-201ENSMUST00000117007 127 ntBASIC3.01□□□□□ -1.93
Ercc3P49135 Gm14972-201ENSMUST00000121780 364 ntBASIC3.01□□□□□ -1.93
Ercc3P49135 Gm25781-201ENSMUST00000122527 84 ntBASIC3.01□□□□□ -1.93
Ercc3P49135 Gm27926-201ENSMUST00000157180 66 ntBASIC3.01□□□□□ -1.93
Ercc3P49135 Gm24481-201ENSMUST00000157210 102 ntBASIC3.01□□□□□ -1.93
Ercc3P49135 Gm23331-201ENSMUST00000157423 108 ntBASIC3.01□□□□□ -1.93
Ercc3P49135 Gm23033-201ENSMUST00000157996 134 ntBASIC3.01□□□□□ -1.93
Ercc3P49135 Gm25486-201ENSMUST00000158726 63 ntBASIC3.01□□□□□ -1.93
Ercc3P49135 Obox4-ps34-201ENSMUST00000175879 520 ntBASIC3.01□□□□□ -1.93
Ercc3P49135 9230113P08Rik-202ENSMUST00000176153 414 ntAPPRIS P5 TSL 5 BASIC3.01□□□□□ -1.93
Ercc3P49135 Mir6355-201ENSMUST00000183687 106 ntBASIC3.01□□□□□ -1.93
Ercc3P49135 Gm45375-201ENSMUST00000210338 280 ntBASIC3.01□□□□□ -1.93
Ercc3P49135 2900042G08Rik-201ENSMUST00000221776 650 ntBASIC3.01□□□□□ -1.93
Ercc3P49135 Gm26494-201ENSMUST00000083154 143 ntBASIC3.01□□□□□ -1.93
Ercc3P49135 Gm24493-201ENSMUST00000083805 143 ntBASIC3.01□□□□□ -1.93
Ercc3P49135 Acer3-202ENSMUST00000120520 3964 ntTSL 1 (best) BASIC3□□□□□ -1.93
Ercc3P49135 Gm18360-201ENSMUST00000173327 1524 ntBASIC3□□□□□ -1.93
Ercc3P49135 Gm36989-201ENSMUST00000193225 2160 ntBASIC3□□□□□ -1.93
Ercc3P49135 Gm14296-202ENSMUST00000108931 750 ntBASIC3□□□□□ -1.93
Ercc3P49135 Mdga2-203ENSMUST00000113942 423 ntBASIC3□□□□□ -1.93
Ercc3P49135 Gm26255-201ENSMUST00000122492 103 ntBASIC3□□□□□ -1.93
Ercc3P49135 Gm22654-201ENSMUST00000157874 105 ntBASIC3□□□□□ -1.93
Ercc3P49135 2210418O10Rik-204ENSMUST00000166464 750 ntBASIC3□□□□□ -1.93
Ercc3P49135 4930518C09Rik-201ENSMUST00000172700 478 ntTSL 1 (best) BASIC3□□□□□ -1.93
Ercc3P49135 Obox3-ps7-201ENSMUST00000176465 410 ntBASIC3□□□□□ -1.93
Ercc3P49135 Gm23793-201ENSMUST00000179396 117 ntBASIC3□□□□□ -1.93
Ercc3P49135 Mir7013-201ENSMUST00000183540 72 ntBASIC3□□□□□ -1.93
Ercc3P49135 Gm37650-201ENSMUST00000193570 248 ntTSL 1 (best) BASIC3□□□□□ -1.93
Ercc3P49135 Gm44024-201ENSMUST00000203008 476 ntBASIC3□□□□□ -1.93
Ercc3P49135 Tnfrsf23-203ENSMUST00000208017 544 ntTSL 3 BASIC3□□□□□ -1.93
Ercc3P49135 Gm45704-201ENSMUST00000212582 403 ntBASIC3□□□□□ -1.93
Ercc3P49135 Gm23345-201ENSMUST00000083817 150 ntBASIC3□□□□□ -1.93
Ercc3P49135 Gm10192-201ENSMUST00000086672 327 ntAPPRIS P1 BASIC3□□□□□ -1.93
Ercc3P49135 Olfr385-202ENSMUST00000215689 1671 ntAPPRIS P1 TSL 5 BASIC3□□□□□ -1.93
Retrieved 100 of 76,532 protein–RNA pairs in 83.6 ms