Protein–RNA interactions for Protein: P48377

Rfx1, MHC class II regulatory factor RFX1, mousemouse

Predictions only

Length 963 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rfx1P48377 Gm39147-201ENSMUST00000211376 465 ntBASIC4.08□□□□□ -1.76
Rfx1P48377 AC098718.2-201ENSMUST00000226822 285 ntBASIC4.08□□□□□ -1.76
Rfx1P48377 Vmn1r51-207ENSMUST00000227766 4218 ntAPPRIS P1 BASIC4.08□□□□□ -1.76
Rfx1P48377 Glra2-201ENSMUST00000058787 3150 ntAPPRIS P1 TSL 1 (best) BASIC4.08□□□□□ -1.76
Rfx1P48377 Gm25169-201ENSMUST00000104190 129 ntBASIC4.07□□□□□ -1.76
Rfx1P48377 Atp5k-ps2-201ENSMUST00000120437 210 ntBASIC4.07□□□□□ -1.76
Rfx1P48377 Mir1967-201ENSMUST00000157789 82 ntBASIC4.07□□□□□ -1.76
Rfx1P48377 Gm7592-201ENSMUST00000160674 627 ntBASIC4.07□□□□□ -1.76
Rfx1P48377 Gm7582-201ENSMUST00000160831 603 ntBASIC4.07□□□□□ -1.76
Rfx1P48377 Olfr1366-201ENSMUST00000168629 1054 ntAPPRIS ALT2 BASIC4.07□□□□□ -1.76
Rfx1P48377 Gm23365-201ENSMUST00000175019 125 ntBASIC4.07□□□□□ -1.76
Rfx1P48377 Gm25960-201ENSMUST00000175110 125 ntBASIC4.07□□□□□ -1.76
Rfx1P48377 Gm44453-201ENSMUST00000175161 126 ntBASIC4.07□□□□□ -1.76
Rfx1P48377 Gm25195-201ENSMUST00000177656 126 ntBASIC4.07□□□□□ -1.76
Rfx1P48377 Gm24388-201ENSMUST00000177872 107 ntBASIC4.07□□□□□ -1.76
Rfx1P48377 Mir6399-201ENSMUST00000184050 84 ntBASIC4.07□□□□□ -1.76
Rfx1P48377 Gm27648-201ENSMUST00000184315 107 ntBASIC4.07□□□□□ -1.76
Rfx1P48377 Gm5358-201ENSMUST00000212814 353 ntBASIC4.07□□□□□ -1.76
Rfx1P48377 Olfr1366-204ENSMUST00000218154 1054 ntAPPRIS P2 BASIC4.07□□□□□ -1.76
Rfx1P48377 AC122484.1-201ENSMUST00000221578 177 ntBASIC4.07□□□□□ -1.76
Rfx1P48377 AC122834.1-201ENSMUST00000227182 425 ntBASIC4.07□□□□□ -1.76
Rfx1P48377 1700010L04Rik-201ENSMUST00000032872 330 ntTSL 5 BASIC4.07□□□□□ -1.76
Rfx1P48377 Olfr1370-201ENSMUST00000058168 951 ntAPPRIS P1 BASIC4.07□□□□□ -1.76
Rfx1P48377 Olfr1325-203ENSMUST00000216108 3535 ntAPPRIS ALT2 TSL 5 BASIC4.07□□□□□ -1.76
Rfx1P48377 Gm35835-202ENSMUST00000216984 3350 ntTSL 1 (best) BASIC4.06□□□□□ -1.76
Rfx1P48377 Pik3ca-201ENSMUST00000029201 8917 ntAPPRIS P1 TSL 1 (best) BASIC4.06□□□□□ -1.76
Rfx1P48377 Fam111a-203ENSMUST00000144662 3912 ntAPPRIS P3 TSL 5 BASIC4.06□□□□□ -1.76
Rfx1P48377 C87414-206ENSMUST00000162964 2852 ntAPPRIS P2 TSL 1 (best) BASIC4.06□□□□□ -1.76
Rfx1P48377 Traj12-201ENSMUST00000103729 58 ntAPPRIS P1 BASIC4.06□□□□□ -1.76
Rfx1P48377 Gm26418-201ENSMUST00000104275 137 ntBASIC4.06□□□□□ -1.76
Rfx1P48377 Gm24403-201ENSMUST00000104616 130 ntBASIC4.06□□□□□ -1.76
Rfx1P48377 Gm15466-201ENSMUST00000122299 333 ntBASIC4.06□□□□□ -1.76
Rfx1P48377 Gm23816-201ENSMUST00000179617 132 ntBASIC4.06□□□□□ -1.76
Rfx1P48377 Mpc1-ps-201ENSMUST00000181662 330 ntBASIC4.06□□□□□ -1.76
Rfx1P48377 Gm28030-201ENSMUST00000184987 138 ntBASIC4.06□□□□□ -1.76
Rfx1P48377 Gm29574-201ENSMUST00000186226 696 ntBASIC4.06□□□□□ -1.76
Rfx1P48377 Gm28159-201ENSMUST00000190296 696 ntBASIC4.06□□□□□ -1.76
Rfx1P48377 Gm37343-201ENSMUST00000192542 111 ntBASIC4.06□□□□□ -1.76
Rfx1P48377 Trbv18-201ENSMUST00000194256 294 ntBASIC4.06□□□□□ -1.76
Rfx1P48377 AC158597.1-201ENSMUST00000216234 150 ntBASIC4.06□□□□□ -1.76
Rfx1P48377 AC141895.1-201ENSMUST00000218141 273 ntBASIC4.06□□□□□ -1.76
Rfx1P48377 AC125379.1-201ENSMUST00000221928 111 ntBASIC4.06□□□□□ -1.76
Rfx1P48377 Gm24163-201ENSMUST00000093660 132 ntBASIC4.06□□□□□ -1.76
Rfx1P48377 Ccdc178-201ENSMUST00000025160 3335 ntAPPRIS P1 TSL 1 (best) BASIC4.06□□□□□ -1.76
Rfx1P48377 Olfr103-202ENSMUST00000173472 3079 ntAPPRIS P1 TSL 3 BASIC4.06□□□□□ -1.76
Rfx1P48377 Olfr513-202ENSMUST00000214670 2029 ntAPPRIS P1 TSL 5 BASIC4.05□□□□□ -1.76
Rfx1P48377 Acsm3-201ENSMUST00000063770 2651 ntAPPRIS P1 TSL 1 (best) BASIC4.05□□□□□ -1.76
Rfx1P48377 Scai-201ENSMUST00000038874 10709 ntAPPRIS P1 TSL 1 (best) BASIC4.05□□□□□ -1.76
Rfx1P48377 Gm24581-201ENSMUST00000103962 133 ntBASIC4.05□□□□□ -1.76
Rfx1P48377 Gm23271-201ENSMUST00000104052 124 ntBASIC4.05□□□□□ -1.76
Rfx1P48377 Gm26075-201ENSMUST00000104062 121 ntBASIC4.05□□□□□ -1.76
Rfx1P48377 Gm12351-201ENSMUST00000118727 292 ntBASIC4.05□□□□□ -1.76
Rfx1P48377 Gm14069-201ENSMUST00000120815 229 ntBASIC4.05□□□□□ -1.76
Rfx1P48377 Gm22217-201ENSMUST00000157556 313 ntBASIC4.05□□□□□ -1.76
Rfx1P48377 Gm25428-201ENSMUST00000157608 114 ntBASIC4.05□□□□□ -1.76
Rfx1P48377 Gm17166-201ENSMUST00000172006 431 ntBASIC4.05□□□□□ -1.76
Rfx1P48377 Gm43901-201ENSMUST00000203247 453 ntBASIC4.05□□□□□ -1.76
Rfx1P48377 Gm44174-201ENSMUST00000205022 141 ntTSL 2 BASIC4.05□□□□□ -1.76
Rfx1P48377 Gm38997-201ENSMUST00000205669 304 ntTSL 5 BASIC4.05□□□□□ -1.76
Rfx1P48377 Gm45539-201ENSMUST00000210313 428 ntBASIC4.05□□□□□ -1.76
Rfx1P48377 Gm24355-201ENSMUST00000082858 122 ntBASIC4.05□□□□□ -1.76
Rfx1P48377 AC122850.1-201ENSMUST00000220380 5690 ntBASIC4.05□□□□□ -1.76
Rfx1P48377 Csmd3-204ENSMUST00000160658 12460 ntTSL 5 BASIC4.05□□□□□ -1.76
Rfx1P48377 Gm3234-202ENSMUST00000223301 3250 ntTSL 1 (best) BASIC4.04□□□□□ -1.76
Rfx1P48377 Vmn1r185-207ENSMUST00000227695 5292 ntAPPRIS P1 BASIC4.04□□□□□ -1.76
Rfx1P48377 Olfr729-203ENSMUST00000215327 4220 ntAPPRIS P1 TSL 5 BASIC4.04□□□□□ -1.76
Rfx1P48377 Olfr729-204ENSMUST00000215451 4236 ntAPPRIS P1 TSL 5 BASIC4.04□□□□□ -1.76
Rfx1P48377 Igkv6-13-201ENSMUST00000103395 287 ntAPPRIS P1 BASIC4.04□□□□□ -1.76
Rfx1P48377 Gm23492-201ENSMUST00000116837 115 ntBASIC4.04□□□□□ -1.76
Rfx1P48377 Gm11786-201ENSMUST00000120799 155 ntBASIC4.04□□□□□ -1.76
Rfx1P48377 Gm22097-201ENSMUST00000157929 278 ntBASIC4.04□□□□□ -1.76
Rfx1P48377 Gm23775-201ENSMUST00000158991 249 ntBASIC4.04□□□□□ -1.76
Rfx1P48377 Gm27465-201ENSMUST00000184290 91 ntBASIC4.04□□□□□ -1.76
Rfx1P48377 Gm37617-201ENSMUST00000194309 159 ntBASIC4.04□□□□□ -1.76
Rfx1P48377 Gm38171-201ENSMUST00000195716 478 ntTSL 3 BASIC4.04□□□□□ -1.76
Rfx1P48377 Gm567-201ENSMUST00000197127 469 ntTSL 3 BASIC4.04□□□□□ -1.76
Rfx1P48377 Gm34411-201ENSMUST00000201180 280 ntTSL 3 BASIC4.04□□□□□ -1.76
Rfx1P48377 5430435K18Rik-201ENSMUST00000202597 661 ntTSL 1 (best) BASIC4.04□□□□□ -1.76
Rfx1P48377 AC124746.2-201ENSMUST00000226594 427 ntBASIC4.04□□□□□ -1.76
Rfx1P48377 Gm23247-201ENSMUST00000083373 107 ntBASIC4.04□□□□□ -1.76
Rfx1P48377 Olfr679-204ENSMUST00000215704 5018 ntAPPRIS P1 TSL 5 BASIC4.04□□□□□ -1.76
Rfx1P48377 Fam81b-201ENSMUST00000208418 2760 ntAPPRIS P1 TSL 5 BASIC4.04□□□□□ -1.76
Rfx1P48377 Pkhd1l1-202ENSMUST00000166957 12747 ntTSL 5 BASIC4.04□□□□□ -1.76
Rfx1P48377 Pkhd1l1-201ENSMUST00000038336 12741 ntTSL 1 (best) BASIC4.04□□□□□ -1.76
Rfx1P48377 Strbp-201ENSMUST00000028279 16348 ntAPPRIS P1 TSL 5 BASIC4.04□□□□□ -1.76
Rfx1P48377 Olfr1448-204ENSMUST00000216888 4064 ntAPPRIS P1 TSL 5 BASIC4.04□□□□□ -1.76
Rfx1P48377 Dst-211ENSMUST00000183034 23201 ntAPPRIS ALT2 TSL 5 BASIC4.04□□□□□ -1.76
Rfx1P48377 A230004M16Rik-202ENSMUST00000139508 4468 ntTSL 1 (best) BASIC4.03□□□□□ -1.76
Rfx1P48377 Gm24119-201ENSMUST00000103979 246 ntBASIC4.03□□□□□ -1.76
Rfx1P48377 Gm14564-201ENSMUST00000122159 294 ntBASIC4.03□□□□□ -1.76
Rfx1P48377 Gm22792-201ENSMUST00000157225 133 ntBASIC4.03□□□□□ -1.76
Rfx1P48377 Gm22286-201ENSMUST00000179708 107 ntBASIC4.03□□□□□ -1.76
Rfx1P48377 Gm28376-201ENSMUST00000186604 176 ntTSL 5 BASIC4.03□□□□□ -1.76
Rfx1P48377 Gm44563-201ENSMUST00000207958 178 ntBASIC4.03□□□□□ -1.76
Rfx1P48377 Gm10242-201ENSMUST00000090064 330 ntBASIC4.03□□□□□ -1.76
Rfx1P48377 Gm44120-201ENSMUST00000203022 3023 ntBASIC4.03□□□□□ -1.76
Rfx1P48377 Gm37143-201ENSMUST00000195180 3259 ntBASIC4.03□□□□□ -1.76
Rfx1P48377 Rag2-201ENSMUST00000044031 3424 ntAPPRIS P1 TSL 1 (best) BASIC4.03□□□□□ -1.76
Rfx1P48377 Gm43889-201ENSMUST00000203950 3681 ntBASIC4.02□□□□□ -1.77
Rfx1P48377 AC117199.1-201ENSMUST00000219940 3132 ntBASIC4.02□□□□□ -1.77
Retrieved 100 of 76,532 protein–RNA pairs in 129.1 ms