Protein–RNA interactions for Protein: P42859

Htt, Huntingtin, mousemouse

Predictions only

Length 3,119 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HttP42859 Gm43142-201ENSMUST00000198670 361 ntBASIC-0.05□□□□□ -2.42
HttP42859 AL662807.1-201ENSMUST00000224183 126 ntBASIC-0.05□□□□□ -2.42
HttP42859 Gm22298-201ENSMUST00000082662 133 ntBASIC-0.05□□□□□ -2.42
HttP42859 Gm17727-201ENSMUST00000171898 643 ntAPPRIS P1 TSL 5 BASIC-0.05□□□□□ -2.42
HttP42859 Gm28001-201ENSMUST00000183561 117 ntBASIC-0.05□□□□□ -2.42
HttP42859 Gm42570-201ENSMUST00000195937 292 ntBASIC-0.05□□□□□ -2.42
HttP42859 Tmem167-ps1-201ENSMUST00000191236 214 ntBASIC-0.06□□□□□ -2.42
HttP42859 Olfr1556-ps1-201ENSMUST00000204688 466 ntBASIC-0.06□□□□□ -2.42
HttP42859 Gm34783-201ENSMUST00000209159 303 ntBASIC-0.06□□□□□ -2.42
HttP42859 AC122901.2-201ENSMUST00000216926 285 ntBASIC-0.06□□□□□ -2.42
HttP42859 4930543K20Rik-201ENSMUST00000217044 355 ntBASIC-0.06□□□□□ -2.42
HttP42859 AC115878.1-201ENSMUST00000227247 334 ntBASIC-0.06□□□□□ -2.42
HttP42859 Mir33-201ENSMUST00000083531 69 ntBASIC-0.06□□□□□ -2.42
HttP42859 Gm5581-201ENSMUST00000072940 2550 ntBASIC-0.06□□□□□ -2.42
HttP42859 Gm22785-201ENSMUST00000104087 132 ntBASIC-0.06□□□□□ -2.42
HttP42859 n-R5s171-201ENSMUST00000104128 79 ntBASIC-0.06□□□□□ -2.42
HttP42859 Mdga2-203ENSMUST00000113942 423 ntBASIC-0.06□□□□□ -2.42
HttP42859 Gm17991-201ENSMUST00000208139 297 ntBASIC-0.06□□□□□ -2.42
HttP42859 Gm44954-201ENSMUST00000208513 227 ntBASIC-0.06□□□□□ -2.42
HttP42859 Snord82-201ENSMUST00000082889 70 ntBASIC-0.06□□□□□ -2.42
HttP42859 Gm15029-201ENSMUST00000119742 199 ntBASIC-0.07□□□□□ -2.42
HttP42859 Gm26102-201ENSMUST00000157251 284 ntBASIC-0.07□□□□□ -2.42
HttP42859 Ptp4a1-206ENSMUST00000202889 135 ntTSL 2 BASIC-0.07□□□□□ -2.42
HttP42859 AC126043.1-201ENSMUST00000221304 1141 ntBASIC-0.07□□□□□ -2.42
HttP42859 Skint11-201ENSMUST00000079915 820 ntTSL 1 (best) BASIC-0.07□□□□□ -2.42
HttP42859 Gm15088-201ENSMUST00000117973 1508 ntBASIC-0.07□□□□□ -2.42
HttP42859 Gm15098-201ENSMUST00000119036 1508 ntBASIC-0.07□□□□□ -2.42
HttP42859 Gm15211-201ENSMUST00000118932 528 ntBASIC-0.07□□□□□ -2.42
HttP42859 Gm14946-201ENSMUST00000119859 296 ntBASIC-0.07□□□□□ -2.42
HttP42859 Gm25711-201ENSMUST00000158633 128 ntBASIC-0.07□□□□□ -2.42
HttP42859 Gm25026-201ENSMUST00000175017 188 ntBASIC-0.07□□□□□ -2.42
HttP42859 Gm1553-201ENSMUST00000177934 658 ntAPPRIS P1 TSL 1 (best) BASIC-0.07□□□□□ -2.42
HttP42859 Gm27475-201ENSMUST00000183420 61 ntBASIC-0.07□□□□□ -2.42
HttP42859 Mir7065-201ENSMUST00000185110 61 ntBASIC-0.07□□□□□ -2.42
HttP42859 Gm43035-201ENSMUST00000197626 517 ntBASIC-0.07□□□□□ -2.42
HttP42859 Gm20144-201ENSMUST00000203031 165 ntBASIC-0.07□□□□□ -2.42
HttP42859 Gm43897-201ENSMUST00000204019 309 ntBASIC-0.07□□□□□ -2.42
HttP42859 Gm6025-201ENSMUST00000121517 201 ntBASIC-0.07□□□□□ -2.42
HttP42859 Gm20874-201ENSMUST00000178356 663 ntBASIC-0.07□□□□□ -2.42
HttP42859 Ranbp2-ps12-201ENSMUST00000197110 386 ntBASIC-0.07□□□□□ -2.42
HttP42859 Olfr375-ps1-201ENSMUST00000198131 249 ntBASIC-0.07□□□□□ -2.42
HttP42859 Gm10542-201ENSMUST00000097586 273 ntAPPRIS P1 TSL 5 BASIC-0.07□□□□□ -2.42
HttP42859 AC127302.3-201ENSMUST00000215480 2791 ntBASIC-0.08□□□□□ -2.42
HttP42859 Gm14791-201ENSMUST00000119061 1166 ntBASIC-0.08□□□□□ -2.42
HttP42859 Gm7350-201ENSMUST00000120964 636 ntBASIC-0.08□□□□□ -2.42
HttP42859 Gm14800-201ENSMUST00000122084 1272 ntBASIC-0.08□□□□□ -2.42
HttP42859 Gm27999-201ENSMUST00000183539 193 ntBASIC-0.08□□□□□ -2.42
HttP42859 Gm28597-201ENSMUST00000187664 666 ntBASIC-0.08□□□□□ -2.42
HttP42859 Gm24459-201ENSMUST00000082730 86 ntBASIC-0.08□□□□□ -2.42
HttP42859 Gm26074-201ENSMUST00000104063 129 ntBASIC-0.08□□□□□ -2.42
HttP42859 Gm12392-201ENSMUST00000118014 938 ntBASIC-0.08□□□□□ -2.42
HttP42859 Gm11483-201ENSMUST00000119839 247 ntBASIC-0.08□□□□□ -2.42
HttP42859 Gm37771-201ENSMUST00000193121 265 ntBASIC-0.08□□□□□ -2.42
HttP42859 Olfr1059-ps1-201ENSMUST00000215214 586 ntBASIC-0.08□□□□□ -2.42
HttP42859 Gm23829-201ENSMUST00000157392 270 ntBASIC-0.09□□□□□ -2.42
HttP42859 Snord8-201ENSMUST00000175303 110 ntBASIC-0.09□□□□□ -2.42
HttP42859 Gm40604-202ENSMUST00000219541 522 ntTSL 5 BASIC-0.09□□□□□ -2.42
HttP42859 AC170810.3-201ENSMUST00000226177 374 ntBASIC-0.09□□□□□ -2.42
HttP42859 AC166344.2-201ENSMUST00000226747 374 ntBASIC-0.09□□□□□ -2.42
HttP42859 Gm16428-201ENSMUST00000121193 723 ntBASIC-0.09□□□□□ -2.42
HttP42859 Gm23167-201ENSMUST00000157155 103 ntBASIC-0.09□□□□□ -2.42
HttP42859 Gm25011-201ENSMUST00000158398 126 ntBASIC-0.09□□□□□ -2.42
HttP42859 Gm24333-201ENSMUST00000175101 84 ntBASIC-0.09□□□□□ -2.42
HttP42859 Vmn2r-ps19-201ENSMUST00000179720 269 ntBASIC-0.09□□□□□ -2.42
HttP42859 Gm44449-201ENSMUST00000203610 153 ntBASIC-0.09□□□□□ -2.42
HttP42859 Gm45439-201ENSMUST00000211723 359 ntBASIC-0.09□□□□□ -2.42
HttP42859 Olfr1142-ps1-201ENSMUST00000213624 805 ntBASIC-0.09□□□□□ -2.42
HttP42859 Tas2r113-201ENSMUST00000079035 930 ntAPPRIS P1 BASIC-0.09□□□□□ -2.42
HttP42859 Mir544-201ENSMUST00000103813 78 ntBASIC-0.09□□□□□ -2.42
HttP42859 Gm8988-201ENSMUST00000155015 1240 ntBASIC-0.09□□□□□ -2.42
HttP42859 Gm45101-201ENSMUST00000208327 232 ntBASIC-0.09□□□□□ -2.42
HttP42859 Olfr812-201ENSMUST00000057775 1043 ntAPPRIS P1 BASIC-0.09□□□□□ -2.42
HttP42859 Snord85-201ENSMUST00000083262 73 ntBASIC-0.09□□□□□ -2.42
HttP42859 Gm12449-201ENSMUST00000117572 234 ntBASIC-0.1□□□□□ -2.43
HttP42859 Gm22233-201ENSMUST00000157464 114 ntBASIC-0.1□□□□□ -2.43
HttP42859 Gm25669-201ENSMUST00000157699 112 ntBASIC-0.1□□□□□ -2.43
HttP42859 Gm24584-201ENSMUST00000157972 107 ntBASIC-0.1□□□□□ -2.43
HttP42859 Gm25868-201ENSMUST00000158253 114 ntBASIC-0.1□□□□□ -2.43
HttP42859 Gm25211-201ENSMUST00000177553 107 ntBASIC-0.1□□□□□ -2.43
HttP42859 Gm24304-201ENSMUST00000177635 107 ntBASIC-0.1□□□□□ -2.43
HttP42859 Gm25101-201ENSMUST00000179057 107 ntBASIC-0.1□□□□□ -2.43
HttP42859 Gm24464-201ENSMUST00000179697 107 ntBASIC-0.1□□□□□ -2.43
HttP42859 Gm25173-201ENSMUST00000179794 107 ntBASIC-0.1□□□□□ -2.43
HttP42859 Trav7-4-201ENSMUST00000181728 451 ntAPPRIS P1 BASIC-0.1□□□□□ -2.43
HttP42859 Gm19441-201ENSMUST00000221545 330 ntBASIC-0.1□□□□□ -2.43
HttP42859 AC131085.1-201ENSMUST00000224746 656 ntBASIC-0.1□□□□□ -2.43
HttP42859 Gm26054-201ENSMUST00000083037 107 ntBASIC-0.1□□□□□ -2.43
HttP42859 Gm26324-201ENSMUST00000083073 107 ntBASIC-0.1□□□□□ -2.43
HttP42859 Gm26127-201ENSMUST00000083193 107 ntBASIC-0.1□□□□□ -2.43
HttP42859 Mir142b-201ENSMUST00000083486 115 ntBASIC-0.1□□□□□ -2.43
HttP42859 Gm23732-201ENSMUST00000083751 107 ntBASIC-0.1□□□□□ -2.43
HttP42859 Gm22352-201ENSMUST00000083917 107 ntBASIC-0.1□□□□□ -2.43
HttP42859 Gm26051-201ENSMUST00000104642 93 ntBASIC-0.1□□□□□ -2.43
HttP42859 n-R5s157-201ENSMUST00000122543 121 ntBASIC-0.1□□□□□ -2.43
HttP42859 AC154296.1-201ENSMUST00000198150 67 ntBASIC-0.1□□□□□ -2.43
HttP42859 Gm45701-201ENSMUST00000212049 235 ntBASIC-0.1□□□□□ -2.43
HttP42859 AC134254.5-201ENSMUST00000223436 400 ntBASIC-0.1□□□□□ -2.43
HttP42859 AC124196.2-201ENSMUST00000224835 145 ntBASIC-0.1□□□□□ -2.43
HttP42859 Gm43924-201ENSMUST00000204851 1736 ntBASIC-0.1□□□□□ -2.43
HttP42859 Gm12053-201ENSMUST00000119022 252 ntBASIC-0.11□□□□□ -2.43
Retrieved 100 of 76,532 protein–RNA pairs in 85.5 ms