Protein–RNA interactions for Protein: P39428

Traf1, TNF receptor-associated factor 1, mousemouse

Predictions only

Length 409 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Traf1P39428 Gm16326-201ENSMUST00000162843 414 ntBASIC2.48□□□□□ -2.01
Traf1P39428 Vmn1r-ps15-201ENSMUST00000177365 910 ntBASIC2.48□□□□□ -2.01
Traf1P39428 Gm25020-201ENSMUST00000178071 107 ntBASIC2.48□□□□□ -2.01
Traf1P39428 Gm25457-201ENSMUST00000179509 107 ntBASIC2.48□□□□□ -2.01
Traf1P39428 Gm26727-201ENSMUST00000180773 366 ntAPPRIS P1 BASIC2.48□□□□□ -2.01
Traf1P39428 Gm28506-201ENSMUST00000189937 150 ntBASIC2.48□□□□□ -2.01
Traf1P39428 Gm37468-201ENSMUST00000194767 854 ntTSL 1 (best) BASIC2.48□□□□□ -2.01
Traf1P39428 Gm45355-201ENSMUST00000211342 296 ntTSL 3 BASIC2.48□□□□□ -2.01
Traf1P39428 Tas2r123-201ENSMUST00000071696 1002 ntAPPRIS P1 BASIC2.48□□□□□ -2.01
Traf1P39428 Olfr1442-203ENSMUST00000208494 3593 ntAPPRIS P1 TSL 3 BASIC2.47□□□□□ -2.01
Traf1P39428 Gm14670-201ENSMUST00000117327 337 ntBASIC2.47□□□□□ -2.01
Traf1P39428 Gm11935-201ENSMUST00000118608 399 ntBASIC2.47□□□□□ -2.01
Traf1P39428 Gm14392-201ENSMUST00000120332 401 ntBASIC2.47□□□□□ -2.01
Traf1P39428 Gm14413-201ENSMUST00000122158 408 ntBASIC2.47□□□□□ -2.01
Traf1P39428 Gm22199-201ENSMUST00000122660 126 ntBASIC2.47□□□□□ -2.01
Traf1P39428 Gm16510-201ENSMUST00000153501 249 ntBASIC2.47□□□□□ -2.01
Traf1P39428 Gm22555-201ENSMUST00000157801 62 ntBASIC2.47□□□□□ -2.01
Traf1P39428 Gm24191-201ENSMUST00000157977 122 ntBASIC2.47□□□□□ -2.01
Traf1P39428 Gm25012-201ENSMUST00000158396 164 ntBASIC2.47□□□□□ -2.01
Traf1P39428 Gm25488-201ENSMUST00000158728 118 ntBASIC2.47□□□□□ -2.01
Traf1P39428 Gm18588-201ENSMUST00000177308 492 ntBASIC2.47□□□□□ -2.01
Traf1P39428 Gm24388-201ENSMUST00000177872 107 ntBASIC2.47□□□□□ -2.01
Traf1P39428 Mir6355-201ENSMUST00000183687 106 ntBASIC2.47□□□□□ -2.01
Traf1P39428 Gm27236-201ENSMUST00000184147 442 ntBASIC2.47□□□□□ -2.01
Traf1P39428 Gm18356-201ENSMUST00000185677 623 ntBASIC2.47□□□□□ -2.01
Traf1P39428 Gm29069-201ENSMUST00000185857 675 ntTSL 3 BASIC2.47□□□□□ -2.01
Traf1P39428 Gm28740-201ENSMUST00000186142 215 ntBASIC2.47□□□□□ -2.01
Traf1P39428 Gm37923-201ENSMUST00000191624 161 ntBASIC2.47□□□□□ -2.01
Traf1P39428 Gm25820-202ENSMUST00000197479 128 ntBASIC2.47□□□□□ -2.01
Traf1P39428 Gm5034-201ENSMUST00000199115 634 ntBASIC2.47□□□□□ -2.01
Traf1P39428 Olfr1481-ps1-201ENSMUST00000207312 134 ntBASIC2.47□□□□□ -2.01
Traf1P39428 AC093316.2-201ENSMUST00000220015 172 ntTSL 5 BASIC2.47□□□□□ -2.01
Traf1P39428 Gm22494-201ENSMUST00000104495 128 ntBASIC2.46□□□□□ -2.02
Traf1P39428 Rps15a-ps6-201ENSMUST00000117476 393 ntBASIC2.46□□□□□ -2.02
Traf1P39428 Gm12721-201ENSMUST00000120621 268 ntBASIC2.46□□□□□ -2.02
Traf1P39428 Gm14402-201ENSMUST00000122217 508 ntBASIC2.46□□□□□ -2.02
Traf1P39428 Gm12162-202ENSMUST00000129432 127 ntTSL 5 BASIC2.46□□□□□ -2.02
Traf1P39428 Gm25625-201ENSMUST00000157221 96 ntBASIC2.46□□□□□ -2.02
Traf1P39428 Gm25384-201ENSMUST00000157807 105 ntBASIC2.46□□□□□ -2.02
Traf1P39428 Gm22328-201ENSMUST00000158074 112 ntBASIC2.46□□□□□ -2.02
Traf1P39428 Ttn-225ENSMUST00000190813 300 ntTSL 5 BASIC2.46□□□□□ -2.02
Traf1P39428 Gm44794-201ENSMUST00000206550 411 ntBASIC2.46□□□□□ -2.02
Traf1P39428 Gm18453-201ENSMUST00000208000 626 ntBASIC2.46□□□□□ -2.02
Traf1P39428 AC155715.1-201ENSMUST00000213575 463 ntBASIC2.46□□□□□ -2.02
Traf1P39428 Olfr6-204ENSMUST00000219365 951 ntAPPRIS P1 BASIC2.46□□□□□ -2.02
Traf1P39428 AC163357.1-201ENSMUST00000220847 233 ntBASIC2.46□□□□□ -2.02
Traf1P39428 Gm18617-201ENSMUST00000222311 259 ntBASIC2.46□□□□□ -2.02
Traf1P39428 Gm7214-201ENSMUST00000222428 272 ntBASIC2.46□□□□□ -2.02
Traf1P39428 AC112972.1-201ENSMUST00000227329 365 ntBASIC2.46□□□□□ -2.02
Traf1P39428 Mir29b-2-201ENSMUST00000083478 81 ntBASIC2.46□□□□□ -2.02
Traf1P39428 BC100530-201ENSMUST00000096089 619 ntAPPRIS P1 TSL 1 (best) BASIC2.46□□□□□ -2.02
Traf1P39428 Catsperb-201ENSMUST00000055156 3716 ntAPPRIS P1 TSL 1 (best) BASIC2.45□□□□□ -2.02
Traf1P39428 Knl1-202ENSMUST00000028802 7800 ntAPPRIS P1 TSL 5 BASIC2.45□□□□□ -2.02
Traf1P39428 Defb43-201ENSMUST00000100491 408 ntAPPRIS P1 TSL 1 (best) BASIC2.45□□□□□ -2.02
Traf1P39428 Traj39-201ENSMUST00000103703 63 ntAPPRIS P1 BASIC2.45□□□□□ -2.02
Traf1P39428 Gm22709-201ENSMUST00000116893 111 ntBASIC2.45□□□□□ -2.02
Traf1P39428 Gm12255-201ENSMUST00000117184 284 ntBASIC2.45□□□□□ -2.02
Traf1P39428 Gm13885-201ENSMUST00000117569 187 ntBASIC2.45□□□□□ -2.02
Traf1P39428 Gm12646-201ENSMUST00000119144 238 ntBASIC2.45□□□□□ -2.02
Traf1P39428 Scgb1b26-ps-201ENSMUST00000121845 291 ntBASIC2.45□□□□□ -2.02
Traf1P39428 Gm25711-201ENSMUST00000158633 128 ntBASIC2.45□□□□□ -2.02
Traf1P39428 Gm22011-201ENSMUST00000158790 123 ntBASIC2.45□□□□□ -2.02
Traf1P39428 Gm23548-201ENSMUST00000158963 106 ntBASIC2.45□□□□□ -2.02
Traf1P39428 Gm27539-201ENSMUST00000184971 224 ntBASIC2.45□□□□□ -2.02
Traf1P39428 Trav5d-2-201ENSMUST00000196107 275 ntBASIC2.45□□□□□ -2.02
Traf1P39428 Trav5n-2-201ENSMUST00000197136 275 ntBASIC2.45□□□□□ -2.02
Traf1P39428 Gm44881-201ENSMUST00000205425 367 ntBASIC2.45□□□□□ -2.02
Traf1P39428 AC158597.1-201ENSMUST00000216234 150 ntBASIC2.45□□□□□ -2.02
Traf1P39428 AC188459.1-201ENSMUST00000216651 300 ntBASIC2.45□□□□□ -2.02
Traf1P39428 Serf1-201ENSMUST00000022145 601 ntAPPRIS P1 TSL 1 (best) BASIC2.45□□□□□ -2.02
Traf1P39428 Gm45941-202ENSMUST00000223144 389 ntTSL 2 BASIC2.45□□□□□ -2.02
Traf1P39428 Mir93-201ENSMUST00000083593 88 ntBASIC2.45□□□□□ -2.02
Traf1P39428 Gm10203-201ENSMUST00000087348 198 ntAPPRIS P1 TSL 5 BASIC2.45□□□□□ -2.02
Traf1P39428 Olfr229-202ENSMUST00000214904 3125 ntAPPRIS P1 TSL 5 BASIC2.45□□□□□ -2.02
Traf1P39428 Cypt15-201ENSMUST00000115114 519 ntAPPRIS P1 TSL 1 (best) BASIC2.44□□□□□ -2.02
Traf1P39428 Gm12235-201ENSMUST00000118596 170 ntBASIC2.44□□□□□ -2.02
Traf1P39428 Gm13596-201ENSMUST00000153354 292 ntTSL 5 BASIC2.44□□□□□ -2.02
Traf1P39428 Gm24053-201ENSMUST00000158620 105 ntBASIC2.44□□□□□ -2.02
Traf1P39428 Gm26501-201ENSMUST00000178307 107 ntBASIC2.44□□□□□ -2.02
Traf1P39428 Gm42672-201ENSMUST00000197821 352 ntBASIC2.44□□□□□ -2.02
Traf1P39428 Gm16351-202ENSMUST00000209660 337 ntTSL 5 BASIC2.44□□□□□ -2.02
Traf1P39428 Zmynd11-223ENSMUST00000222358 340 ntTSL 5 BASIC2.44□□□□□ -2.02
Traf1P39428 Hmgb1l-201ENSMUST00000082150 571 ntBASIC2.44□□□□□ -2.02
Traf1P39428 Gm22062-201ENSMUST00000082563 107 ntBASIC2.44□□□□□ -2.02
Traf1P39428 Gm43753-201ENSMUST00000196539 3309 ntBASIC2.44□□□□□ -2.02
Traf1P39428 Gpr174-207ENSMUST00000178838 4955 ntAPPRIS P1 TSL 2 BASIC2.43□□□□□ -2.02
Traf1P39428 n-R5s200-201ENSMUST00000104194 113 ntBASIC2.43□□□□□ -2.02
Traf1P39428 Gm13672-201ENSMUST00000117554 459 ntBASIC2.43□□□□□ -2.02
Traf1P39428 Gm14530-201ENSMUST00000122391 333 ntBASIC2.43□□□□□ -2.02
Traf1P39428 Gm25888-201ENSMUST00000157778 302 ntBASIC2.43□□□□□ -2.02
Traf1P39428 Gm24084-201ENSMUST00000175173 137 ntBASIC2.43□□□□□ -2.02
Traf1P39428 Mir28b-201ENSMUST00000175399 80 ntBASIC2.43□□□□□ -2.02
Traf1P39428 Mir6997-201ENSMUST00000184313 71 ntBASIC2.43□□□□□ -2.02
Traf1P39428 Gm37650-201ENSMUST00000193570 248 ntTSL 1 (best) BASIC2.43□□□□□ -2.02
Traf1P39428 Gm42807-201ENSMUST00000200141 329 ntBASIC2.43□□□□□ -2.02
Traf1P39428 Gm45375-201ENSMUST00000210338 280 ntBASIC2.43□□□□□ -2.02
Traf1P39428 CT010480.5-201ENSMUST00000225026 217 ntBASIC2.43□□□□□ -2.02
Traf1P39428 AC133079.1-201ENSMUST00000220943 1881 ntBASIC2.43□□□□□ -2.02
Traf1P39428 Trdn-201ENSMUST00000095762 4514 ntAPPRIS P2 TSL 5 BASIC2.43□□□□□ -2.02
Traf1P39428 Ppp1r3a-201ENSMUST00000045096 6965 ntAPPRIS P1 TSL 1 (best) BASIC2.43□□□□□ -2.02
Retrieved 100 of 76,532 protein–RNA pairs in 615.2 ms