Protein–RNA interactions for Protein: P13297

Msx1, Homeobox protein MSX-1, mousemouse

Predictions only

Length 303 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Msx1P13297 AC124562.2-201ENSMUST00000223888 2313 ntBASIC4.06□□□□□ -1.76
Msx1P13297 Olfm3-201ENSMUST00000051309 3928 ntAPPRIS P4 TSL 1 (best) BASIC4.06□□□□□ -1.76
Msx1P13297 A630033H20Rik-201ENSMUST00000067249 3004 ntAPPRIS P1 TSL 1 (best) BASIC4.05□□□□□ -1.76
Msx1P13297 Btbd35f3-201ENSMUST00000140300 1943 ntAPPRIS P1 BASIC4.05□□□□□ -1.76
Msx1P13297 Cul4b-203ENSMUST00000115118 3344 ntAPPRIS P2 TSL 1 (best) BASIC4.05□□□□□ -1.76
Msx1P13297 Olfr1222-202ENSMUST00000214027 2393 ntAPPRIS P1 TSL 5 BASIC4.05□□□□□ -1.76
Msx1P13297 Olfr1123-203ENSMUST00000216208 5245 ntAPPRIS ALT2 TSL 2 BASIC4.05□□□□□ -1.76
Msx1P13297 Gm7173-201ENSMUST00000101410 2832 ntAPPRIS P4 TSL 5 BASIC4.05□□□□□ -1.76
Msx1P13297 Fnd3c2-201ENSMUST00000091282 3662 ntAPPRIS P1 TSL 1 (best) BASIC4.05□□□□□ -1.76
Msx1P13297 Olfr112-204ENSMUST00000208832 3173 ntAPPRIS P1 TSL 1 (best) BASIC4.05□□□□□ -1.76
Msx1P13297 Vmn1r77-203ENSMUST00000227320 8308 ntAPPRIS P2 BASIC4.05□□□□□ -1.76
Msx1P13297 Ankrd31-201ENSMUST00000207464 5146 ntAPPRIS P1 TSL 5 BASIC4.05□□□□□ -1.76
Msx1P13297 Gm14973-201ENSMUST00000117248 255 ntBASIC4.05□□□□□ -1.76
Msx1P13297 Gm22560-201ENSMUST00000157332 120 ntBASIC4.05□□□□□ -1.76
Msx1P13297 Gm25999-201ENSMUST00000175398 133 ntBASIC4.05□□□□□ -1.76
Msx1P13297 Gm24388-201ENSMUST00000177872 107 ntBASIC4.05□□□□□ -1.76
Msx1P13297 Gm44294-201ENSMUST00000205090 728 ntBASIC4.05□□□□□ -1.76
Msx1P13297 AC126939.3-201ENSMUST00000226061 166 ntBASIC4.05□□□□□ -1.76
Msx1P13297 AC121898.1-201ENSMUST00000227599 288 ntBASIC4.05□□□□□ -1.76
Msx1P13297 Gm25851-201ENSMUST00000082794 107 ntBASIC4.05□□□□□ -1.76
Msx1P13297 Gm23510-201ENSMUST00000083083 163 ntBASIC4.05□□□□□ -1.76
Msx1P13297 Defb33-201ENSMUST00000098908 424 ntAPPRIS P1 TSL 2 BASIC4.05□□□□□ -1.76
Msx1P13297 Hfm1-202ENSMUST00000117588 4870 ntAPPRIS P1 TSL 5 BASIC4.05□□□□□ -1.76
Msx1P13297 Atad1-201ENSMUST00000070210 2813 ntAPPRIS P1 TSL 1 (best) BASIC4.05□□□□□ -1.76
Msx1P13297 Olfr128-202ENSMUST00000216440 3644 ntAPPRIS P1 TSL 5 BASIC4.05□□□□□ -1.76
Msx1P13297 Olfr107-203ENSMUST00000215947 3954 ntAPPRIS P1 TSL 5 BASIC4.05□□□□□ -1.76
Msx1P13297 Hm629797-201ENSMUST00000183645 2398 ntBASIC4.05□□□□□ -1.76
Msx1P13297 Olfr145-202ENSMUST00000213688 6691 ntAPPRIS P1 TSL 5 BASIC4.05□□□□□ -1.76
Msx1P13297 Olfr354-202ENSMUST00000217479 9539 ntAPPRIS P1 TSL 5 BASIC4.05□□□□□ -1.76
Msx1P13297 Depdc1a-201ENSMUST00000029825 2920 ntTSL 1 (best) BASIC4.05□□□□□ -1.76
Msx1P13297 Olfr815-202ENSMUST00000216182 2881 ntAPPRIS P1 TSL 5 BASIC4.04□□□□□ -1.76
Msx1P13297 Vmn1r43-203ENSMUST00000226741 12542 ntAPPRIS P1 BASIC4.04□□□□□ -1.76
Msx1P13297 Gm43715-201ENSMUST00000196307 2715 ntBASIC4.04□□□□□ -1.76
Msx1P13297 Gm44601-201ENSMUST00000206678 2720 ntTSL 1 (best) BASIC4.04□□□□□ -1.76
Msx1P13297 Olfr556-203ENSMUST00000217526 3741 ntAPPRIS P1 TSL 5 BASIC4.04□□□□□ -1.76
Msx1P13297 Olfr186-203ENSMUST00000216415 2323 ntAPPRIS P1 TSL 5 BASIC4.04□□□□□ -1.76
Msx1P13297 Gm24581-201ENSMUST00000103962 133 ntBASIC4.04□□□□□ -1.76
Msx1P13297 Gm23476-201ENSMUST00000158881 274 ntBASIC4.04□□□□□ -1.76
Msx1P13297 Gm43829-201ENSMUST00000196191 3802 ntBASIC4.04□□□□□ -1.76
Msx1P13297 Gm44649-201ENSMUST00000205608 364 ntTSL 1 (best) BASIC4.04□□□□□ -1.76
Msx1P13297 Olfr291-202ENSMUST00000217039 3471 ntAPPRIS ALT2 TSL 2 BASIC4.04□□□□□ -1.76
Msx1P13297 Gm44644-202ENSMUST00000208825 3133 ntTSL 2 BASIC4.04□□□□□ -1.76
Msx1P13297 Olfr406-203ENSMUST00000217016 2651 ntAPPRIS P1 TSL 5 BASIC4.04□□□□□ -1.76
Msx1P13297 Olfr352-202ENSMUST00000217325 3337 ntAPPRIS P1 TSL 5 BASIC4.03□□□□□ -1.76
Msx1P13297 Gm43046-201ENSMUST00000198771 2451 ntBASIC4.03□□□□□ -1.76
Msx1P13297 Gm15314-201ENSMUST00000120740 1887 ntBASIC4.03□□□□□ -1.76
Msx1P13297 Gm24982-201ENSMUST00000104456 132 ntBASIC4.03□□□□□ -1.76
Msx1P13297 Gm13560-201ENSMUST00000121865 329 ntBASIC4.03□□□□□ -1.76
Msx1P13297 Gm15214-201ENSMUST00000122155 470 ntBASIC4.03□□□□□ -1.76
Msx1P13297 Gm25107-201ENSMUST00000122472 129 ntBASIC4.03□□□□□ -1.76
Msx1P13297 Gm23183-201ENSMUST00000122595 323 ntBASIC4.03□□□□□ -1.76
Msx1P13297 Gm25965-201ENSMUST00000157170 93 ntBASIC4.03□□□□□ -1.76
Msx1P13297 Gm23895-201ENSMUST00000158108 160 ntBASIC4.03□□□□□ -1.76
Msx1P13297 Gm24730-201ENSMUST00000158228 117 ntBASIC4.03□□□□□ -1.76
Msx1P13297 Gm29097-201ENSMUST00000190273 422 ntBASIC4.03□□□□□ -1.76
Msx1P13297 Gm38364-201ENSMUST00000191814 179 ntBASIC4.03□□□□□ -1.76
Msx1P13297 Gm43586-201ENSMUST00000195948 310 ntBASIC4.03□□□□□ -1.76
Msx1P13297 Gm44976-201ENSMUST00000205543 261 ntBASIC4.03□□□□□ -1.76
Msx1P13297 CT025579.1-201ENSMUST00000223779 366 ntBASIC4.03□□□□□ -1.76
Msx1P13297 Mir137-201ENSMUST00000083635 73 ntBASIC4.03□□□□□ -1.76
Msx1P13297 Gm45517-201ENSMUST00000209973 2468 ntBASIC4.03□□□□□ -1.76
Msx1P13297 Mybpc1-201ENSMUST00000119185 3752 ntAPPRIS ALT2 TSL 1 (best) BASIC4.03□□□□□ -1.76
Msx1P13297 AI314180-203ENSMUST00000107557 4946 ntAPPRIS ALT2 TSL 1 (best) BASIC4.03□□□□□ -1.76
Msx1P13297 Vmn1r18-202ENSMUST00000228574 14315 ntAPPRIS P1 BASIC4.02□□□□□ -1.77
Msx1P13297 Btbd35f5-201ENSMUST00000179538 1950 ntAPPRIS P1 BASIC4.02□□□□□ -1.77
Msx1P13297 Olfr1507-203ENSMUST00000206062 2803 ntAPPRIS P1 TSL 2 BASIC4.02□□□□□ -1.77
Msx1P13297 Gm9911-201ENSMUST00000211467 2802 ntBASIC4.02□□□□□ -1.77
Msx1P13297 Olfr1208-202ENSMUST00000214121 2823 ntAPPRIS P1 TSL 3 BASIC4.02□□□□□ -1.77
Msx1P13297 Olfr1177-ps-202ENSMUST00000216713 2821 ntAPPRIS P5 TSL 3 BASIC4.02□□□□□ -1.77
Msx1P13297 Olfr1097-201ENSMUST00000111576 4705 ntAPPRIS P1 TSL 3 BASIC4.02□□□□□ -1.77
Msx1P13297 Vmn2r70-201ENSMUST00000168230 2565 ntAPPRIS P1 TSL 5 BASIC4.02□□□□□ -1.77
Msx1P13297 Gm23907-201ENSMUST00000104595 189 ntBASIC4.02□□□□□ -1.77
Msx1P13297 Rpl30-ps9-201ENSMUST00000122265 345 ntBASIC4.02□□□□□ -1.77
Msx1P13297 Gm23960-201ENSMUST00000157206 131 ntBASIC4.02□□□□□ -1.77
Msx1P13297 Gm25882-201ENSMUST00000157784 85 ntBASIC4.02□□□□□ -1.77
Msx1P13297 Gm24503-201ENSMUST00000158454 135 ntBASIC4.02□□□□□ -1.77
Msx1P13297 Gm23194-201ENSMUST00000158813 105 ntBASIC4.02□□□□□ -1.77
Msx1P13297 H2al1k-201ENSMUST00000178196 510 ntAPPRIS P1 BASIC4.02□□□□□ -1.77
Msx1P13297 Gm43206-201ENSMUST00000197990 114 ntBASIC4.02□□□□□ -1.77
Msx1P13297 Olfr1319-ps1-201ENSMUST00000208550 274 ntBASIC4.02□□□□□ -1.77
Msx1P13297 AC153887.2-201ENSMUST00000219160 3838 ntBASIC4.02□□□□□ -1.77
Msx1P13297 AC154738.5-201ENSMUST00000227397 310 ntBASIC4.02□□□□□ -1.77
Msx1P13297 Mir215-201ENSMUST00000083628 112 ntBASIC4.02□□□□□ -1.77
Msx1P13297 Mir504-201ENSMUST00000093602 79 ntBASIC4.02□□□□□ -1.77
Msx1P13297 Olfr714-203ENSMUST00000214429 4324 ntAPPRIS P1 TSL 5 BASIC4.02□□□□□ -1.77
Msx1P13297 Fam19a1-202ENSMUST00000122120 3252 ntAPPRIS P1 TSL 1 (best) BASIC4.02□□□□□ -1.77
Msx1P13297 AC125374.3-201ENSMUST00000214983 2810 ntBASIC4.02□□□□□ -1.77
Msx1P13297 Vmn2r48-201ENSMUST00000165611 2568 ntAPPRIS P1 TSL 5 BASIC4.02□□□□□ -1.77
Msx1P13297 Vmn2r93-201ENSMUST00000079206 2574 ntAPPRIS P1 TSL 5 BASIC4.02□□□□□ -1.77
Msx1P13297 Gm14400-201ENSMUST00000117234 2135 ntBASIC4.01□□□□□ -1.77
Msx1P13297 Ccser2-201ENSMUST00000067700 7334 ntTSL 5 BASIC4.01□□□□□ -1.77
Msx1P13297 Dync2h1-206ENSMUST00000147193 13103 ntAPPRIS ALT2 TSL 5 BASIC4.01□□□□□ -1.77
Msx1P13297 Zfp616-205ENSMUST00000178159 2964 ntAPPRIS P1 BASIC4.01□□□□□ -1.77
Msx1P13297 Klhl13-201ENSMUST00000035973 2996 ntTSL 5 BASIC4.01□□□□□ -1.77
Msx1P13297 Gm23652-201ENSMUST00000116752 107 ntBASIC4.01□□□□□ -1.77
Msx1P13297 Gm6079-201ENSMUST00000121356 404 ntBASIC4.01□□□□□ -1.77
Msx1P13297 Gm23098-201ENSMUST00000157552 299 ntBASIC4.01□□□□□ -1.77
Msx1P13297 Gm22946-201ENSMUST00000158558 82 ntBASIC4.01□□□□□ -1.77
Msx1P13297 Gm17689-201ENSMUST00000170030 330 ntAPPRIS P1 TSL 1 (best) BASIC4.01□□□□□ -1.77
Msx1P13297 Gm27773-201ENSMUST00000184087 78 ntBASIC4.01□□□□□ -1.77
Retrieved 100 of 76,532 protein–RNA pairs in 91.6 ms