Protein–RNA interactions for Protein: P11416

Rara, Retinoic acid receptor alpha, mousemouse

Predictions only

Length 462 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RaraP11416 Vmn1r82-201ENSMUST00000072801 4784 ntAPPRIS P1 BASIC3.89□□□□□ -1.79
RaraP11416 9330159F19Rik-201ENSMUST00000092627 5681 ntAPPRIS P1 TSL 1 (best) BASIC3.88□□□□□ -1.79
RaraP11416 Olfr1255-202ENSMUST00000214508 2253 ntAPPRIS P1 TSL 5 BASIC3.88□□□□□ -1.79
RaraP11416 AC124572.2-201ENSMUST00000218041 5152 ntBASIC3.88□□□□□ -1.79
RaraP11416 Npy6r-201ENSMUST00000042747 2567 ntAPPRIS P1 TSL 1 (best) BASIC3.88□□□□□ -1.79
RaraP11416 Olfr1216-202ENSMUST00000216000 3595 ntAPPRIS P1 TSL 5 BASIC3.88□□□□□ -1.79
RaraP11416 Gm15183-201ENSMUST00000118933 348 ntBASIC3.88□□□□□ -1.79
RaraP11416 Gm12926-201ENSMUST00000121158 409 ntBASIC3.88□□□□□ -1.79
RaraP11416 Gm22986-201ENSMUST00000122753 130 ntBASIC3.88□□□□□ -1.79
RaraP11416 Gm26482-201ENSMUST00000158015 62 ntBASIC3.88□□□□□ -1.79
RaraP11416 Gm26403-201ENSMUST00000158500 105 ntBASIC3.88□□□□□ -1.79
RaraP11416 Gm16546-201ENSMUST00000159442 355 ntBASIC3.88□□□□□ -1.79
RaraP11416 Gm23365-201ENSMUST00000175019 125 ntBASIC3.88□□□□□ -1.79
RaraP11416 Gm25960-201ENSMUST00000175110 125 ntBASIC3.88□□□□□ -1.79
RaraP11416 Gm44453-201ENSMUST00000175161 126 ntBASIC3.88□□□□□ -1.79
RaraP11416 Gm25195-201ENSMUST00000177656 126 ntBASIC3.88□□□□□ -1.79
RaraP11416 Mir6370-201ENSMUST00000183510 120 ntBASIC3.88□□□□□ -1.79
RaraP11416 Scgb2b14-ps-201ENSMUST00000189424 336 ntBASIC3.88□□□□□ -1.79
RaraP11416 Igkv1-115-201ENSMUST00000198714 302 ntBASIC3.88□□□□□ -1.79
RaraP11416 Gm18000-201ENSMUST00000212153 800 ntBASIC3.88□□□□□ -1.79
RaraP11416 Gm45796-201ENSMUST00000212483 114 ntBASIC3.88□□□□□ -1.79
RaraP11416 Snord15a-201ENSMUST00000083888 148 ntBASIC3.88□□□□□ -1.79
RaraP11416 Gm42768-201ENSMUST00000197734 2897 ntBASIC3.88□□□□□ -1.79
RaraP11416 Olfr811-204ENSMUST00000217571 2399 ntAPPRIS P1 TSL 5 BASIC3.88□□□□□ -1.79
RaraP11416 Olfr1446-203ENSMUST00000216805 2417 ntAPPRIS P1 TSL 3 BASIC3.87□□□□□ -1.79
RaraP11416 Cr2-212ENSMUST00000210219 4227 ntAPPRIS P1 TSL 5 BASIC3.87□□□□□ -1.79
RaraP11416 Olfr298-204ENSMUST00000217110 3549 ntAPPRIS P1 TSL 5 BASIC3.87□□□□□ -1.79
RaraP11416 Gm42446-201ENSMUST00000199783 3284 ntBASIC3.87□□□□□ -1.79
RaraP11416 Gm42585-201ENSMUST00000198731 4020 ntBASIC3.87□□□□□ -1.79
RaraP11416 Ighv3-5-201ENSMUST00000103479 299 ntAPPRIS P1 BASIC3.87□□□□□ -1.79
RaraP11416 Trgj3-201ENSMUST00000103562 60 ntAPPRIS P1 BASIC3.87□□□□□ -1.79
RaraP11416 Gm11460-201ENSMUST00000118200 361 ntBASIC3.87□□□□□ -1.79
RaraP11416 Gm14684-201ENSMUST00000145722 123 ntTSL 5 BASIC3.87□□□□□ -1.79
RaraP11416 Gm23585-201ENSMUST00000157656 102 ntBASIC3.87□□□□□ -1.79
RaraP11416 Gm24054-201ENSMUST00000158619 105 ntBASIC3.87□□□□□ -1.79
RaraP11416 Gm23702-201ENSMUST00000158840 130 ntBASIC3.87□□□□□ -1.79
RaraP11416 Gm24666-201ENSMUST00000158937 167 ntBASIC3.87□□□□□ -1.79
RaraP11416 Gm28010-201ENSMUST00000179485 126 ntBASIC3.87□□□□□ -1.79
RaraP11416 Pnrc2-203ENSMUST00000180300 171 ntTSL 1 (best) BASIC3.87□□□□□ -1.79
RaraP11416 Mir6371-201ENSMUST00000184470 111 ntBASIC3.87□□□□□ -1.79
RaraP11416 Gm37575-201ENSMUST00000195467 309 ntBASIC3.87□□□□□ -1.79
RaraP11416 Gm43236-201ENSMUST00000197414 313 ntTSL 5 BASIC3.87□□□□□ -1.79
RaraP11416 AC153887.2-201ENSMUST00000219160 3838 ntBASIC3.87□□□□□ -1.79
RaraP11416 AC122834.1-201ENSMUST00000227182 425 ntBASIC3.87□□□□□ -1.79
RaraP11416 Gm22978-201ENSMUST00000082607 160 ntBASIC3.87□□□□□ -1.79
RaraP11416 4930467E23Rik-201ENSMUST00000098909 2514 ntAPPRIS P1 TSL 5 BASIC3.87□□□□□ -1.79
RaraP11416 Olfr112-201ENSMUST00000085548 3103 ntAPPRIS P1 TSL 5 BASIC3.87□□□□□ -1.79
RaraP11416 Vmn1r89-202ENSMUST00000226717 4120 ntAPPRIS P2 BASIC3.87□□□□□ -1.79
RaraP11416 Zfp600-204ENSMUST00000168483 4244 ntAPPRIS P1 TSL 2 BASIC3.87□□□□□ -1.79
RaraP11416 Olfr107-203ENSMUST00000215947 3954 ntAPPRIS P1 TSL 5 BASIC3.87□□□□□ -1.79
RaraP11416 Cyp3a41a-201ENSMUST00000094111 2060 ntAPPRIS P1 TSL 1 (best) BASIC3.86□□□□□ -1.79
RaraP11416 Lrrtm2-201ENSMUST00000091636 5665 ntAPPRIS P1 TSL 1 (best) BASIC3.86□□□□□ -1.79
RaraP11416 AC158921.1-201ENSMUST00000227861 3468 ntBASIC3.86□□□□□ -1.79
RaraP11416 Gm8473-201ENSMUST00000176697 1885 ntBASIC3.86□□□□□ -1.79
RaraP11416 A930027P06Rik-201ENSMUST00000221298 2975 ntBASIC3.86□□□□□ -1.79
RaraP11416 Gm26140-201ENSMUST00000103807 110 ntBASIC3.86□□□□□ -1.79
RaraP11416 Gm13801-201ENSMUST00000120750 160 ntBASIC3.86□□□□□ -1.79
RaraP11416 n-R5s68-201ENSMUST00000122639 82 ntBASIC3.86□□□□□ -1.79
RaraP11416 Gm25438-201ENSMUST00000158281 110 ntBASIC3.86□□□□□ -1.79
RaraP11416 Gm22139-201ENSMUST00000158747 105 ntBASIC3.86□□□□□ -1.79
RaraP11416 Gm16289-201ENSMUST00000162079 183 ntBASIC3.86□□□□□ -1.79
RaraP11416 Gm29308-201ENSMUST00000188863 315 ntBASIC3.86□□□□□ -1.79
RaraP11416 Gm28537-201ENSMUST00000189026 315 ntBASIC3.86□□□□□ -1.79
RaraP11416 Gm28159-201ENSMUST00000190296 696 ntBASIC3.86□□□□□ -1.79
RaraP11416 Gm19774-201ENSMUST00000190667 114 ntBASIC3.86□□□□□ -1.79
RaraP11416 Gm29631-201ENSMUST00000191065 315 ntBASIC3.86□□□□□ -1.79
RaraP11416 Gm37698-201ENSMUST00000192605 463 ntBASIC3.86□□□□□ -1.79
RaraP11416 Gm44524-201ENSMUST00000203899 271 ntBASIC3.86□□□□□ -1.79
RaraP11416 Gm44864-201ENSMUST00000207292 505 ntTSL 2 BASIC3.86□□□□□ -1.79
RaraP11416 Gm45116-201ENSMUST00000207392 275 ntBASIC3.86□□□□□ -1.79
RaraP11416 Gm25205-201ENSMUST00000082841 103 ntBASIC3.86□□□□□ -1.79
RaraP11416 Gm25987-201ENSMUST00000083234 107 ntBASIC3.86□□□□□ -1.79
RaraP11416 Gm24453-201ENSMUST00000083346 76 ntBASIC3.86□□□□□ -1.79
RaraP11416 Vmn1r51-207ENSMUST00000227766 4218 ntAPPRIS P1 BASIC3.86□□□□□ -1.79
RaraP11416 Lrrc19-202ENSMUST00000107101 2820 ntAPPRIS P1 TSL 1 (best) BASIC3.86□□□□□ -1.79
RaraP11416 Zfp97-201ENSMUST00000147630 2684 ntAPPRIS P1 TSL 2 BASIC3.86□□□□□ -1.79
RaraP11416 Gm24276-201ENSMUST00000102181 110 ntBASIC3.85□□□□□ -1.79
RaraP11416 Gm23271-201ENSMUST00000104052 124 ntBASIC3.85□□□□□ -1.79
RaraP11416 Gm12449-201ENSMUST00000117572 234 ntBASIC3.85□□□□□ -1.79
RaraP11416 Gm28702-201ENSMUST00000188276 253 ntTSL 5 BASIC3.85□□□□□ -1.79
RaraP11416 Gm37796-201ENSMUST00000195327 134 ntBASIC3.85□□□□□ -1.79
RaraP11416 Gm44338-201ENSMUST00000198614 110 ntBASIC3.85□□□□□ -1.79
RaraP11416 Gm45445-201ENSMUST00000209586 232 ntBASIC3.85□□□□□ -1.79
RaraP11416 Gm23727-201ENSMUST00000083352 164 ntBASIC3.85□□□□□ -1.79
RaraP11416 Zfp273-203ENSMUST00000181391 2399 ntAPPRIS P1 TSL 1 (best) BASIC3.85□□□□□ -1.79
RaraP11416 Olfr1461-202ENSMUST00000207113 3481 ntAPPRIS P1 TSL 2 BASIC3.85□□□□□ -1.79
RaraP11416 Olfr1326-ps1-201ENSMUST00000059880 3637 ntAPPRIS P1 TSL 5 BASIC3.85□□□□□ -1.79
RaraP11416 Glra2-201ENSMUST00000058787 3150 ntAPPRIS P1 TSL 1 (best) BASIC3.85□□□□□ -1.79
RaraP11416 Olfr309-202ENSMUST00000174158 3293 ntAPPRIS P1 TSL 2 BASIC3.85□□□□□ -1.79
RaraP11416 Olfr116-202ENSMUST00000216128 4477 ntAPPRIS P1 TSL 5 BASIC3.84□□□□□ -1.79
RaraP11416 AC153964.2-201ENSMUST00000217704 2474 ntBASIC3.84□□□□□ -1.79
RaraP11416 Olfr109-204ENSMUST00000217602 5437 ntAPPRIS P1 TSL 5 BASIC3.84□□□□□ -1.79
RaraP11416 Hsf3-202ENSMUST00000119035 2691 ntTSL 1 (best) BASIC3.84□□□□□ -1.79
RaraP11416 Mir767-201ENSMUST00000103256 107 ntBASIC3.84□□□□□ -1.79
RaraP11416 Gm22148-201ENSMUST00000104445 107 ntBASIC3.84□□□□□ -1.79
RaraP11416 Gm16005-201ENSMUST00000120515 269 ntBASIC3.84□□□□□ -1.79
RaraP11416 Gm25107-201ENSMUST00000122472 129 ntBASIC3.84□□□□□ -1.79
RaraP11416 Gm24892-201ENSMUST00000122747 104 ntBASIC3.84□□□□□ -1.79
RaraP11416 Gm22560-201ENSMUST00000157332 120 ntBASIC3.84□□□□□ -1.79
RaraP11416 Gm23098-201ENSMUST00000157552 299 ntBASIC3.84□□□□□ -1.79
Retrieved 100 of 76,532 protein–RNA pairs in 100.2 ms