Protein–RNA interactions for Protein: P08121

Col3a1, Collagen alpha-1(III) chain, mousemouse

Predictions only

Length 1,464 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col3a1P08121 Olfr1366-201ENSMUST00000168629 1054 ntAPPRIS ALT2 BASIC2.76□□□□□ -1.97
Col3a1P08121 Gm20484-201ENSMUST00000173738 231 ntTSL 2 BASIC2.76□□□□□ -1.97
Col3a1P08121 Gm21797-201ENSMUST00000177579 543 ntAPPRIS P1 BASIC2.76□□□□□ -1.97
Col3a1P08121 Gm21767-201ENSMUST00000178689 543 ntAPPRIS P1 BASIC2.76□□□□□ -1.97
Col3a1P08121 Gm21822-201ENSMUST00000179302 543 ntAPPRIS P1 BASIC2.76□□□□□ -1.97
Col3a1P08121 Mir6997-201ENSMUST00000184313 71 ntBASIC2.76□□□□□ -1.97
Col3a1P08121 Gm37579-201ENSMUST00000194291 142 ntBASIC2.76□□□□□ -1.97
Col3a1P08121 Mir691-201ENSMUST00000199719 78 ntBASIC2.76□□□□□ -1.97
Col3a1P08121 Olfr1366-204ENSMUST00000218154 1054 ntAPPRIS P2 BASIC2.76□□□□□ -1.97
Col3a1P08121 AC140254.1-201ENSMUST00000220063 331 ntBASIC2.76□□□□□ -1.97
Col3a1P08121 AC122367.2-201ENSMUST00000220987 534 ntTSL 2 BASIC2.76□□□□□ -1.97
Col3a1P08121 AC130222.1-201ENSMUST00000221198 256 ntBASIC2.76□□□□□ -1.97
Col3a1P08121 Hamp-201ENSMUST00000062620 410 ntAPPRIS P1 TSL 1 (best) BASIC2.76□□□□□ -1.97
Col3a1P08121 Gm9174-201ENSMUST00000078149 255 ntBASIC2.76□□□□□ -1.97
Col3a1P08121 Gm23845-201ENSMUST00000083834 152 ntBASIC2.76□□□□□ -1.97
Col3a1P08121 Gm37642-201ENSMUST00000193166 1735 ntBASIC2.75□□□□□ -1.97
Col3a1P08121 Gm32014-202ENSMUST00000215328 4168 ntTSL 1 (best) BASIC2.75□□□□□ -1.97
Col3a1P08121 Olfr166-202ENSMUST00000213531 4205 ntAPPRIS P1 TSL 5 BASIC2.75□□□□□ -1.97
Col3a1P08121 Gm26077-201ENSMUST00000104064 123 ntBASIC2.75□□□□□ -1.97
Col3a1P08121 Gm13687-201ENSMUST00000119857 282 ntBASIC2.75□□□□□ -1.97
Col3a1P08121 Gm15213-201ENSMUST00000122098 216 ntBASIC2.75□□□□□ -1.97
Col3a1P08121 Gm13656-201ENSMUST00000123829 345 ntTSL 3 BASIC2.75□□□□□ -1.97
Col3a1P08121 Gm24060-201ENSMUST00000157494 95 ntBASIC2.75□□□□□ -1.97
Col3a1P08121 Gm17183-201ENSMUST00000171170 493 ntBASIC2.75□□□□□ -1.97
Col3a1P08121 Gm27585-201ENSMUST00000183717 199 ntBASIC2.75□□□□□ -1.97
Col3a1P08121 Gm40040-202ENSMUST00000196337 305 ntTSL 3 BASIC2.75□□□□□ -1.97
Col3a1P08121 Gm42925-201ENSMUST00000197359 285 ntBASIC2.75□□□□□ -1.97
Col3a1P08121 Olfr792-202ENSMUST00000215436 2113 ntAPPRIS P1 TSL 5 BASIC2.75□□□□□ -1.97
Col3a1P08121 AC159203.2-201ENSMUST00000221326 193 ntBASIC2.75□□□□□ -1.97
Col3a1P08121 Olfr1370-201ENSMUST00000058168 951 ntAPPRIS P1 BASIC2.75□□□□□ -1.97
Col3a1P08121 Gm5670-201ENSMUST00000093546 372 ntBASIC2.75□□□□□ -1.97
Col3a1P08121 Gm43373-201ENSMUST00000202552 2870 ntBASIC2.75□□□□□ -1.97
Col3a1P08121 Olfr1450-202ENSMUST00000213587 2872 ntAPPRIS P1 TSL 5 BASIC2.75□□□□□ -1.97
Col3a1P08121 Gm381-201ENSMUST00000117443 2037 ntBASIC2.75□□□□□ -1.97
Col3a1P08121 Gm15084-201ENSMUST00000178585 1502 ntBASIC2.75□□□□□ -1.97
Col3a1P08121 Catsperb-201ENSMUST00000055156 3716 ntAPPRIS P1 TSL 1 (best) BASIC2.75□□□□□ -1.97
Col3a1P08121 Olfr777-202ENSMUST00000204573 5407 ntAPPRIS P1 TSL 5 BASIC2.74□□□□□ -1.97
Col3a1P08121 Gm36669-201ENSMUST00000201757 3650 ntTSL 1 (best) BASIC2.74□□□□□ -1.97
Col3a1P08121 Gm6185-201ENSMUST00000193379 3553 ntBASIC2.74□□□□□ -1.97
Col3a1P08121 Cdrt4os2-201ENSMUST00000128675 494 ntTSL 2 BASIC2.74□□□□□ -1.97
Col3a1P08121 Gm26171-201ENSMUST00000158422 131 ntBASIC2.74□□□□□ -1.97
Col3a1P08121 Vmn2r-ps65-201ENSMUST00000173309 220 ntBASIC2.74□□□□□ -1.97
Col3a1P08121 Gm25956-201ENSMUST00000175115 217 ntBASIC2.74□□□□□ -1.97
Col3a1P08121 Gm29014-201ENSMUST00000191422 326 ntBASIC2.74□□□□□ -1.97
Col3a1P08121 Olfr505-ps1-201ENSMUST00000207626 976 ntBASIC2.74□□□□□ -1.97
Col3a1P08121 Gm7407-201ENSMUST00000208301 568 ntBASIC2.74□□□□□ -1.97
Col3a1P08121 AC134596.2-201ENSMUST00000222158 171 ntBASIC2.74□□□□□ -1.97
Col3a1P08121 AC172751.1-201ENSMUST00000226887 440 ntBASIC2.74□□□□□ -1.97
Col3a1P08121 2610044O15Rik8-201ENSMUST00000079272 264 ntTSL 5 BASIC2.74□□□□□ -1.97
Col3a1P08121 Gm25801-201ENSMUST00000082638 106 ntBASIC2.74□□□□□ -1.97
Col3a1P08121 Gm22974-201ENSMUST00000083301 103 ntBASIC2.74□□□□□ -1.97
Col3a1P08121 Mir496a-201ENSMUST00000093627 79 ntBASIC2.74□□□□□ -1.97
Col3a1P08121 Gm37402-201ENSMUST00000194525 5000 ntBASIC2.74□□□□□ -1.97
Col3a1P08121 Olfr855-202ENSMUST00000215587 1797 ntAPPRIS P1 TSL 5 BASIC2.73□□□□□ -1.97
Col3a1P08121 Olfr807-203ENSMUST00000217106 1788 ntAPPRIS P1 TSL 5 BASIC2.73□□□□□ -1.97
Col3a1P08121 Gm44527-201ENSMUST00000182210 2945 ntTSL 2 BASIC2.73□□□□□ -1.97
Col3a1P08121 Rpl30-ps3-201ENSMUST00000117928 348 ntBASIC2.73□□□□□ -1.97
Col3a1P08121 Gm14838-201ENSMUST00000118913 248 ntBASIC2.73□□□□□ -1.97
Col3a1P08121 Gm11430-201ENSMUST00000121317 217 ntBASIC2.73□□□□□ -1.97
Col3a1P08121 Gm12785-201ENSMUST00000122052 172 ntBASIC2.73□□□□□ -1.97
Col3a1P08121 Gm23980-201ENSMUST00000157135 158 ntBASIC2.73□□□□□ -1.97
Col3a1P08121 Gm25520-201ENSMUST00000158389 118 ntBASIC2.73□□□□□ -1.97
Col3a1P08121 Tcrg-C3-201ENSMUST00000164407 519 ntAPPRIS ALT2 TSL 1 (best) BASIC2.73□□□□□ -1.97
Col3a1P08121 Gm16490-201ENSMUST00000165299 351 ntBASIC2.73□□□□□ -1.97
Col3a1P08121 1700022E09Rik-201ENSMUST00000185295 299 ntTSL 5 BASIC2.73□□□□□ -1.97
Col3a1P08121 Gm29227-201ENSMUST00000187139 315 ntBASIC2.73□□□□□ -1.97
Col3a1P08121 Gm29034-201ENSMUST00000188099 315 ntBASIC2.73□□□□□ -1.97
Col3a1P08121 Gm37129-201ENSMUST00000195791 315 ntBASIC2.73□□□□□ -1.97
Col3a1P08121 Gm43407-201ENSMUST00000199816 317 ntBASIC2.73□□□□□ -1.97
Col3a1P08121 Olfr797-ps1-201ENSMUST00000203614 415 ntBASIC2.73□□□□□ -1.97
Col3a1P08121 Gm44825-201ENSMUST00000207557 150 ntBASIC2.73□□□□□ -1.97
Col3a1P08121 Gm44598-201ENSMUST00000207566 150 ntBASIC2.73□□□□□ -1.97
Col3a1P08121 Gm8940-201ENSMUST00000212585 219 ntBASIC2.73□□□□□ -1.97
Col3a1P08121 AC087891.1-201ENSMUST00000217867 318 ntTSL 5 BASIC2.73□□□□□ -1.97
Col3a1P08121 AC130829.3-201ENSMUST00000222735 154 ntBASIC2.73□□□□□ -1.97
Col3a1P08121 AC133598.3-201ENSMUST00000224322 568 ntBASIC2.73□□□□□ -1.97
Col3a1P08121 AC168062.3-201ENSMUST00000227025 165 ntBASIC2.73□□□□□ -1.97
Col3a1P08121 Gm22571-201ENSMUST00000082984 70 ntBASIC2.73□□□□□ -1.97
Col3a1P08121 Gm25207-201ENSMUST00000093745 107 ntBASIC2.73□□□□□ -1.97
Col3a1P08121 Gm17969-201ENSMUST00000185706 2557 ntBASIC2.73□□□□□ -1.97
Col3a1P08121 Thoc2-201ENSMUST00000047037 7622 ntAPPRIS P1 TSL 5 BASIC2.73□□□□□ -1.97
Col3a1P08121 Vmn1r87-202ENSMUST00000211249 1835 ntAPPRIS P1 TSL 3 BASIC2.73□□□□□ -1.97
Col3a1P08121 Olfr715-202ENSMUST00000214919 5114 ntAPPRIS P1 TSL 5 BASIC2.73□□□□□ -1.97
Col3a1P08121 Gm43540-201ENSMUST00000196320 3848 ntBASIC2.73□□□□□ -1.97
Col3a1P08121 AC133079.1-201ENSMUST00000220943 1881 ntBASIC2.73□□□□□ -1.97
Col3a1P08121 Zbtb37-203ENSMUST00000162226 18814 ntAPPRIS P1 TSL 1 (best) BASIC2.73□□□□□ -1.97
Col3a1P08121 Gm14298-201ENSMUST00000139032 237 ntBASIC2.72□□□□□ -1.97
Col3a1P08121 Gm16356-201ENSMUST00000143300 169 ntBASIC2.72□□□□□ -1.97
Col3a1P08121 Gm28305-201ENSMUST00000147249 365 ntAPPRIS P1 TSL 2 BASIC2.72□□□□□ -1.97
Col3a1P08121 Gm22598-201ENSMUST00000157600 127 ntBASIC2.72□□□□□ -1.97
Col3a1P08121 Gm24010-201ENSMUST00000157731 282 ntBASIC2.72□□□□□ -1.97
Col3a1P08121 Ear-ps8-201ENSMUST00000161935 354 ntBASIC2.72□□□□□ -1.97
Col3a1P08121 Gm17162-201ENSMUST00000168538 473 ntBASIC2.72□□□□□ -1.97
Col3a1P08121 Lce6a-202ENSMUST00000170676 485 ntAPPRIS P1 TSL 1 (best) BASIC2.72□□□□□ -1.97
Col3a1P08121 Gm6112-201ENSMUST00000208037 629 ntBASIC2.72□□□□□ -1.97
Col3a1P08121 AC125374.2-201ENSMUST00000214278 162 ntBASIC2.72□□□□□ -1.97
Col3a1P08121 AC140477.1-201ENSMUST00000222354 246 ntBASIC2.72□□□□□ -1.97
Col3a1P08121 Gm45558-201ENSMUST00000209384 1895 ntBASIC2.72□□□□□ -1.97
Col3a1P08121 Vmn2r90-201ENSMUST00000169805 2592 ntAPPRIS P1 TSL 5 BASIC2.72□□□□□ -1.97
Col3a1P08121 Gm25938-201ENSMUST00000104139 166 ntBASIC2.71□□□□□ -1.97
Retrieved 100 of 76,532 protein–RNA pairs in 89.5 ms