Protein–RNA interactions for Protein: P06804

Tnf, Tumor necrosis factor, mousemouse

Predictions only

Length 235 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TnfP06804 Stfa2l1-201ENSMUST00000079184 414 ntAPPRIS P1 TSL 1 (best) BASIC1.65□□□□□ -2.15
TnfP06804 Mir29b-2-201ENSMUST00000083478 81 ntBASIC1.65□□□□□ -2.15
TnfP06804 Nkain2-202ENSMUST00000092603 273 ntTSL 5 BASIC1.65□□□□□ -2.15
TnfP06804 Olfr935-202ENSMUST00000214157 1693 ntAPPRIS P1 TSL 3 BASIC1.64□□□□□ -2.15
TnfP06804 Gm14402-201ENSMUST00000122217 508 ntBASIC1.64□□□□□ -2.15
TnfP06804 Gm25162-201ENSMUST00000158906 159 ntBASIC1.64□□□□□ -2.15
TnfP06804 Gm7953-201ENSMUST00000168278 469 ntBASIC1.64□□□□□ -2.15
TnfP06804 Gm22800-201ENSMUST00000175627 94 ntBASIC1.64□□□□□ -2.15
TnfP06804 Mir496b-201ENSMUST00000184935 113 ntBASIC1.64□□□□□ -2.15
TnfP06804 Gm43556-201ENSMUST00000196186 681 ntBASIC1.64□□□□□ -2.15
TnfP06804 Rpl26-ps1-201ENSMUST00000213139 426 ntBASIC1.64□□□□□ -2.15
TnfP06804 Calml4-204ENSMUST00000214633 394 ntTSL 3 BASIC1.64□□□□□ -2.15
TnfP06804 AC126672.1-201ENSMUST00000217096 396 ntBASIC1.64□□□□□ -2.15
TnfP06804 Olfr1543-ps1-201ENSMUST00000217448 908 ntBASIC1.64□□□□□ -2.15
TnfP06804 AC093316.2-201ENSMUST00000220015 172 ntTSL 5 BASIC1.64□□□□□ -2.15
TnfP06804 AC069074.1-201ENSMUST00000220048 381 ntBASIC1.64□□□□□ -2.15
TnfP06804 AC134601.3-201ENSMUST00000221682 154 ntBASIC1.64□□□□□ -2.15
TnfP06804 Gm23377-201ENSMUST00000082943 126 ntBASIC1.64□□□□□ -2.15
TnfP06804 Gm34240-201ENSMUST00000192500 1936 ntTSL 1 (best) BASIC1.64□□□□□ -2.15
TnfP06804 Gm12053-201ENSMUST00000119022 252 ntBASIC1.63□□□□□ -2.15
TnfP06804 Gm15266-201ENSMUST00000119635 255 ntBASIC1.63□□□□□ -2.15
TnfP06804 Gm3848-201ENSMUST00000136693 299 ntTSL 1 (best) BASIC1.63□□□□□ -2.15
TnfP06804 Esp24-201ENSMUST00000180245 207 ntAPPRIS P1 TSL 5 BASIC1.63□□□□□ -2.15
TnfP06804 AC116726.2-201ENSMUST00000217629 986 ntBASIC1.63□□□□□ -2.15
TnfP06804 AC166830.2-201ENSMUST00000225821 196 ntBASIC1.63□□□□□ -2.15
TnfP06804 AC027184.1-201ENSMUST00000226991 424 ntBASIC1.63□□□□□ -2.15
TnfP06804 Gm10800-201ENSMUST00000099683 660 ntAPPRIS P1 TSL 5 BASIC1.63□□□□□ -2.15
TnfP06804 Olfr67-201ENSMUST00000183254 3851 ntAPPRIS P1 TSL 5 BASIC1.63□□□□□ -2.15
TnfP06804 Olfr1228-203ENSMUST00000216392 2145 ntAPPRIS ALT2 TSL 5 BASIC1.63□□□□□ -2.15
TnfP06804 Olfr857-203ENSMUST00000217450 2271 ntTSL 3 BASIC1.63□□□□□ -2.15
TnfP06804 Vmn1r67-202ENSMUST00000226237 2352 ntAPPRIS ALT2 BASIC1.62□□□□□ -2.15
TnfP06804 Gm14362-201ENSMUST00000121679 273 ntBASIC1.62□□□□□ -2.15
TnfP06804 Gm26424-201ENSMUST00000122530 104 ntBASIC1.62□□□□□ -2.15
TnfP06804 Gm12670-201ENSMUST00000123606 576 ntTSL 2 BASIC1.62□□□□□ -2.15
TnfP06804 Gm13324-201ENSMUST00000148607 569 ntTSL 3 BASIC1.62□□□□□ -2.15
TnfP06804 Gm15254-201ENSMUST00000149567 273 ntBASIC1.62□□□□□ -2.15
TnfP06804 Gm23558-201ENSMUST00000157823 80 ntBASIC1.62□□□□□ -2.15
TnfP06804 Gm24174-201ENSMUST00000158933 111 ntBASIC1.62□□□□□ -2.15
TnfP06804 Gm7925-201ENSMUST00000166690 401 ntBASIC1.62□□□□□ -2.15
TnfP06804 Gm24333-201ENSMUST00000175101 84 ntBASIC1.62□□□□□ -2.15
TnfP06804 Gm25958-201ENSMUST00000175114 71 ntBASIC1.62□□□□□ -2.15
TnfP06804 Gm24862-201ENSMUST00000179103 79 ntBASIC1.62□□□□□ -2.15
TnfP06804 Gm23310-201ENSMUST00000179105 79 ntBASIC1.62□□□□□ -2.15
TnfP06804 Gm25461-201ENSMUST00000179293 79 ntBASIC1.62□□□□□ -2.15
TnfP06804 Gm36992-201ENSMUST00000195463 428 ntTSL 3 BASIC1.62□□□□□ -2.15
TnfP06804 Gm30784-201ENSMUST00000204491 794 ntTSL 2 BASIC1.62□□□□□ -2.15
TnfP06804 Gm44128-201ENSMUST00000204909 219 ntBASIC1.62□□□□□ -2.15
TnfP06804 Gm44666-201ENSMUST00000208544 391 ntBASIC1.62□□□□□ -2.15
TnfP06804 Gm17990-201ENSMUST00000211728 553 ntBASIC1.62□□□□□ -2.15
TnfP06804 AC165293.1-201ENSMUST00000219669 329 ntBASIC1.62□□□□□ -2.15
TnfP06804 AL590614.1-201ENSMUST00000226037 268 ntBASIC1.62□□□□□ -2.15
TnfP06804 Olfr1013-202ENSMUST00000216397 4925 ntAPPRIS P1 TSL 2 BASIC1.62□□□□□ -2.15
TnfP06804 Vmn1r78-203ENSMUST00000228664 8100 ntAPPRIS P1 BASIC1.62□□□□□ -2.15
TnfP06804 Mir873a-201ENSMUST00000104863 77 ntBASIC1.61□□□□□ -2.15
TnfP06804 Gm6806-201ENSMUST00000120092 1006 ntBASIC1.61□□□□□ -2.15
TnfP06804 Mir6355-201ENSMUST00000183687 106 ntBASIC1.61□□□□□ -2.15
TnfP06804 Gm27248-201ENSMUST00000184004 166 ntBASIC1.61□□□□□ -2.15
TnfP06804 BE692007-203ENSMUST00000189306 362 ntTSL 3 BASIC1.61□□□□□ -2.15
TnfP06804 Topbp1-ps2-201ENSMUST00000191289 189 ntBASIC1.61□□□□□ -2.15
TnfP06804 Gm37641-201ENSMUST00000193837 239 ntBASIC1.61□□□□□ -2.15
TnfP06804 Gm43583-201ENSMUST00000199235 303 ntBASIC1.61□□□□□ -2.15
TnfP06804 Serf1-201ENSMUST00000022145 601 ntAPPRIS P1 TSL 1 (best) BASIC1.61□□□□□ -2.15
TnfP06804 Zmynd11-223ENSMUST00000222358 340 ntTSL 5 BASIC1.61□□□□□ -2.15
TnfP06804 AC102352.1-201ENSMUST00000224187 582 ntBASIC1.61□□□□□ -2.15
TnfP06804 AC164304.1-201ENSMUST00000226920 272 ntBASIC1.61□□□□□ -2.15
TnfP06804 Vmn1r229-201ENSMUST00000076759 921 ntAPPRIS P1 BASIC1.61□□□□□ -2.15
TnfP06804 Snord38a-201ENSMUST00000083746 71 ntBASIC1.61□□□□□ -2.15
TnfP06804 Gm26175-201ENSMUST00000083794 131 ntBASIC1.61□□□□□ -2.15
TnfP06804 Olfr1466-202ENSMUST00000207124 1981 ntAPPRIS P1 TSL 3 BASIC1.61□□□□□ -2.15
TnfP06804 Gm37096-201ENSMUST00000192317 2058 ntBASIC1.6□□□□□ -2.15
TnfP06804 Gm38388-201ENSMUST00000195569 1430 ntBASIC1.6□□□□□ -2.15
TnfP06804 Zfp960-201ENSMUST00000127027 2667 ntAPPRIS P1 TSL 1 (best) BASIC1.6□□□□□ -2.15
TnfP06804 Gm14624-201ENSMUST00000117746 192 ntBASIC1.6□□□□□ -2.15
TnfP06804 Gm23000-201ENSMUST00000157083 139 ntBASIC1.6□□□□□ -2.15
TnfP06804 Gm23331-201ENSMUST00000157423 108 ntBASIC1.6□□□□□ -2.15
TnfP06804 Gm23122-201ENSMUST00000157645 103 ntBASIC1.6□□□□□ -2.15
TnfP06804 Vmn2r-ps34-201ENSMUST00000177433 904 ntBASIC1.6□□□□□ -2.15
TnfP06804 Gm24418-201ENSMUST00000177597 79 ntBASIC1.6□□□□□ -2.15
TnfP06804 Gm24639-201ENSMUST00000178518 79 ntBASIC1.6□□□□□ -2.15
TnfP06804 Gm23076-201ENSMUST00000179082 79 ntBASIC1.6□□□□□ -2.15
TnfP06804 Gm25077-201ENSMUST00000179157 79 ntBASIC1.6□□□□□ -2.15
TnfP06804 Gm10719-203ENSMUST00000179272 675 ntAPPRIS ALT2 TSL 5 BASIC1.6□□□□□ -2.15
TnfP06804 4932441J04Rik-201ENSMUST00000180708 729 ntTSL 1 (best) BASIC1.6□□□□□ -2.15
TnfP06804 Gm9892-201ENSMUST00000182415 992 ntBASIC1.6□□□□□ -2.15
TnfP06804 Mir6399-201ENSMUST00000184050 84 ntBASIC1.6□□□□□ -2.15
TnfP06804 Gm28794-201ENSMUST00000185276 136 ntBASIC1.6□□□□□ -2.15
TnfP06804 Gm38280-201ENSMUST00000192610 158 ntBASIC1.6□□□□□ -2.15
TnfP06804 Gm9402-201ENSMUST00000196849 388 ntBASIC1.6□□□□□ -2.15
TnfP06804 Gm26379-202ENSMUST00000200225 132 ntBASIC1.6□□□□□ -2.15
TnfP06804 5430435K18Rik-201ENSMUST00000202597 661 ntTSL 1 (best) BASIC1.6□□□□□ -2.15
TnfP06804 Olfr1304-ps1-201ENSMUST00000208032 189 ntBASIC1.6□□□□□ -2.15
TnfP06804 Gm45366-201ENSMUST00000209828 384 ntBASIC1.6□□□□□ -2.15
TnfP06804 Gm2829-201ENSMUST00000213121 499 ntBASIC1.6□□□□□ -2.15
TnfP06804 CT030687.1-201ENSMUST00000221854 162 ntBASIC1.6□□□□□ -2.15
TnfP06804 Olfr821-201ENSMUST00000054364 933 ntAPPRIS P1 BASIC1.6□□□□□ -2.15
TnfP06804 Olfr1218-204ENSMUST00000215054 3875 ntAPPRIS P1 TSL 5 BASIC1.6□□□□□ -2.15
TnfP06804 Gm10324-201ENSMUST00000092528 1815 ntAPPRIS P1 TSL 5 BASIC1.59□□□□□ -2.15
TnfP06804 Clec1b-202ENSMUST00000112079 455 ntTSL 1 (best) BASIC1.59□□□□□ -2.15
TnfP06804 Xlr4e-ps-201ENSMUST00000122102 648 ntBASIC1.59□□□□□ -2.15
TnfP06804 n-R5s150-201ENSMUST00000122705 108 ntBASIC1.59□□□□□ -2.15
Retrieved 100 of 76,532 protein–RNA pairs in 103.6 ms