Protein–RNA interactions for Protein: O88696

Clpp, ATP-dependent Clp protease proteolytic subunit, mitochondrial, mousemouse

Predictions only

Length 272 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ClppO88696 Gm24205-201ENSMUST00000082953 107 ntBASIC2.09□□□□□ -2.07
ClppO88696 Gm25405-201ENSMUST00000082973 107 ntBASIC2.09□□□□□ -2.07
ClppO88696 Gm22628-201ENSMUST00000082988 107 ntBASIC2.09□□□□□ -2.07
ClppO88696 Gm26324-201ENSMUST00000083073 107 ntBASIC2.09□□□□□ -2.07
ClppO88696 Gm24535-201ENSMUST00000083140 107 ntBASIC2.09□□□□□ -2.07
ClppO88696 Gm26496-201ENSMUST00000083150 107 ntBASIC2.09□□□□□ -2.07
ClppO88696 Gm26127-201ENSMUST00000083193 107 ntBASIC2.09□□□□□ -2.07
ClppO88696 Gm24456-201ENSMUST00000083198 107 ntBASIC2.09□□□□□ -2.07
ClppO88696 Gm24458-201ENSMUST00000083204 107 ntBASIC2.09□□□□□ -2.07
ClppO88696 Gm24018-201ENSMUST00000083232 107 ntBASIC2.09□□□□□ -2.07
ClppO88696 Gm25794-201ENSMUST00000083286 107 ntBASIC2.09□□□□□ -2.07
ClppO88696 Gm25790-201ENSMUST00000083293 107 ntBASIC2.09□□□□□ -2.07
ClppO88696 Gm22295-201ENSMUST00000083311 107 ntBASIC2.09□□□□□ -2.07
ClppO88696 Gm25127-201ENSMUST00000083336 107 ntBASIC2.09□□□□□ -2.07
ClppO88696 Gm25583-201ENSMUST00000083413 107 ntBASIC2.09□□□□□ -2.07
ClppO88696 Gm25577-201ENSMUST00000083414 107 ntBASIC2.09□□□□□ -2.07
ClppO88696 Gm24414-201ENSMUST00000083434 107 ntBASIC2.09□□□□□ -2.07
ClppO88696 Gm24861-201ENSMUST00000083459 107 ntBASIC2.09□□□□□ -2.07
ClppO88696 Mir322-201ENSMUST00000083484 95 ntBASIC2.09□□□□□ -2.07
ClppO88696 Gm24803-201ENSMUST00000083693 107 ntBASIC2.09□□□□□ -2.07
ClppO88696 Gm23103-201ENSMUST00000083725 107 ntBASIC2.09□□□□□ -2.07
ClppO88696 Gm22580-201ENSMUST00000083727 107 ntBASIC2.09□□□□□ -2.07
ClppO88696 Gm24260-201ENSMUST00000083741 107 ntBASIC2.09□□□□□ -2.07
ClppO88696 Gm23732-201ENSMUST00000083751 107 ntBASIC2.09□□□□□ -2.07
ClppO88696 Gm22682-201ENSMUST00000083854 107 ntBASIC2.09□□□□□ -2.07
ClppO88696 Gm25869-201ENSMUST00000083855 107 ntBASIC2.09□□□□□ -2.07
ClppO88696 Gm24693-201ENSMUST00000083885 107 ntBASIC2.09□□□□□ -2.07
ClppO88696 Gm26317-201ENSMUST00000083894 107 ntBASIC2.09□□□□□ -2.07
ClppO88696 Gm22352-201ENSMUST00000083917 107 ntBASIC2.09□□□□□ -2.07
ClppO88696 Gm24448-201ENSMUST00000083979 107 ntBASIC2.09□□□□□ -2.07
ClppO88696 Gm22798-201ENSMUST00000083992 107 ntBASIC2.09□□□□□ -2.07
ClppO88696 Gm26427-201ENSMUST00000093648 107 ntBASIC2.09□□□□□ -2.07
ClppO88696 Gm22886-201ENSMUST00000093714 107 ntBASIC2.09□□□□□ -2.07
ClppO88696 Gm22170-201ENSMUST00000097247 107 ntBASIC2.09□□□□□ -2.07
ClppO88696 AL645643.1-201ENSMUST00000222438 3897 ntBASIC2.09□□□□□ -2.07
ClppO88696 Zfp980-202ENSMUST00000180014 1938 ntAPPRIS P1 TSL 2 BASIC2.09□□□□□ -2.08
ClppO88696 Gm37642-201ENSMUST00000193166 1735 ntBASIC2.08□□□□□ -2.08
ClppO88696 Gm37602-201ENSMUST00000195187 3310 ntBASIC2.08□□□□□ -2.08
ClppO88696 Gm43046-201ENSMUST00000198771 2451 ntBASIC2.08□□□□□ -2.08
ClppO88696 Gm13378-201ENSMUST00000117483 336 ntBASIC2.08□□□□□ -2.08
ClppO88696 Gm26149-201ENSMUST00000157432 108 ntBASIC2.08□□□□□ -2.08
ClppO88696 Gm22159-201ENSMUST00000158412 130 ntBASIC2.08□□□□□ -2.08
ClppO88696 Gm22891-201ENSMUST00000158641 164 ntBASIC2.08□□□□□ -2.08
ClppO88696 Gm22136-201ENSMUST00000158751 268 ntBASIC2.08□□□□□ -2.08
ClppO88696 Mir6406-201ENSMUST00000183592 120 ntBASIC2.08□□□□□ -2.08
ClppO88696 Scgb1b1-ps-201ENSMUST00000189264 268 ntBASIC2.08□□□□□ -2.08
ClppO88696 Ighv1-1-201ENSMUST00000194912 291 ntBASIC2.08□□□□□ -2.08
ClppO88696 Gm18971-201ENSMUST00000197240 374 ntBASIC2.08□□□□□ -2.08
ClppO88696 Gm45652-201ENSMUST00000210926 3831 ntBASIC2.08□□□□□ -2.08
ClppO88696 AC158606.1-201ENSMUST00000220078 325 ntBASIC2.08□□□□□ -2.08
ClppO88696 AC157017.1-201ENSMUST00000220148 364 ntBASIC2.08□□□□□ -2.08
ClppO88696 AC124104.1-201ENSMUST00000226279 417 ntBASIC2.08□□□□□ -2.08
ClppO88696 Vmn1r230-201ENSMUST00000053974 951 ntAPPRIS P1 BASIC2.08□□□□□ -2.08
ClppO88696 Gm42536-201ENSMUST00000197562 1613 ntBASIC2.08□□□□□ -2.08
ClppO88696 Gm12580-201ENSMUST00000127456 1751 ntTSL 1 (best) BASIC2.08□□□□□ -2.08
ClppO88696 AC122828.3-201ENSMUST00000223019 3915 ntBASIC2.07□□□□□ -2.08
ClppO88696 Traj39-201ENSMUST00000103703 63 ntAPPRIS P1 BASIC2.07□□□□□ -2.08
ClppO88696 Tslrn1-201ENSMUST00000129479 747 ntTSL 3 BASIC2.07□□□□□ -2.08
ClppO88696 Dnal1-203ENSMUST00000136159 403 ntTSL 5 BASIC2.07□□□□□ -2.08
ClppO88696 Gm24237-201ENSMUST00000157790 132 ntBASIC2.07□□□□□ -2.08
ClppO88696 Gm24409-201ENSMUST00000157881 152 ntBASIC2.07□□□□□ -2.08
ClppO88696 Gm24191-201ENSMUST00000157977 122 ntBASIC2.07□□□□□ -2.08
ClppO88696 Gm21885-201ENSMUST00000178891 327 ntBASIC2.07□□□□□ -2.08
ClppO88696 Gm28217-201ENSMUST00000188613 648 ntTSL 5 BASIC2.07□□□□□ -2.08
ClppO88696 Gm43978-201ENSMUST00000203491 451 ntBASIC2.07□□□□□ -2.08
ClppO88696 Gm18453-201ENSMUST00000208000 626 ntBASIC2.07□□□□□ -2.08
ClppO88696 Gm45402-201ENSMUST00000211796 223 ntBASIC2.07□□□□□ -2.08
ClppO88696 AC163357.1-201ENSMUST00000220847 233 ntBASIC2.07□□□□□ -2.08
ClppO88696 AC124772.1-201ENSMUST00000221325 151 ntBASIC2.07□□□□□ -2.08
ClppO88696 AC116589.3-202ENSMUST00000221770 649 ntBASIC2.07□□□□□ -2.08
ClppO88696 CT009718.4-201ENSMUST00000221881 109 ntBASIC2.07□□□□□ -2.08
ClppO88696 AC116589.6-201ENSMUST00000222252 649 ntBASIC2.07□□□□□ -2.08
ClppO88696 Gm16368-201ENSMUST00000222340 435 ntAPPRIS P1 BASIC2.07□□□□□ -2.08
ClppO88696 Gm6109-201ENSMUST00000223297 348 ntBASIC2.07□□□□□ -2.08
ClppO88696 Gm45558-201ENSMUST00000209384 1895 ntBASIC2.07□□□□□ -2.08
ClppO88696 AC133079.1-201ENSMUST00000220943 1881 ntBASIC2.07□□□□□ -2.08
ClppO88696 Crisp1-201ENSMUST00000026498 1416 ntAPPRIS P1 TSL 1 (best) BASIC2.07□□□□□ -2.08
ClppO88696 Olfr1218-204ENSMUST00000215054 3875 ntAPPRIS P1 TSL 5 BASIC2.07□□□□□ -2.08
ClppO88696 Vmn2r69-201ENSMUST00000171213 2553 ntAPPRIS P1 TSL 5 BASIC2.06□□□□□ -2.08
ClppO88696 Gm7164-201ENSMUST00000117503 450 ntBASIC2.06□□□□□ -2.08
ClppO88696 Gm14402-201ENSMUST00000122217 508 ntBASIC2.06□□□□□ -2.08
ClppO88696 Gm13324-201ENSMUST00000148607 569 ntTSL 3 BASIC2.06□□□□□ -2.08
ClppO88696 Gm25961-201ENSMUST00000157174 135 ntBASIC2.06□□□□□ -2.08
ClppO88696 Gm23016-201ENSMUST00000158431 62 ntBASIC2.06□□□□□ -2.08
ClppO88696 Gm24498-201ENSMUST00000158445 102 ntBASIC2.06□□□□□ -2.08
ClppO88696 Gm26501-201ENSMUST00000178307 107 ntBASIC2.06□□□□□ -2.08
ClppO88696 Gm27511-201ENSMUST00000183502 127 ntBASIC2.06□□□□□ -2.08
ClppO88696 Mir195b-201ENSMUST00000184814 97 ntBASIC2.06□□□□□ -2.08
ClppO88696 Gm29134-201ENSMUST00000186579 126 ntBASIC2.06□□□□□ -2.08
ClppO88696 Gm28337-201ENSMUST00000190425 666 ntBASIC2.06□□□□□ -2.08
ClppO88696 Trav5d-2-201ENSMUST00000196107 275 ntBASIC2.06□□□□□ -2.08
ClppO88696 Trav5n-2-201ENSMUST00000197136 275 ntBASIC2.06□□□□□ -2.08
ClppO88696 Gm30784-201ENSMUST00000204491 794 ntTSL 2 BASIC2.06□□□□□ -2.08
ClppO88696 Olfr1481-ps1-201ENSMUST00000207312 134 ntBASIC2.06□□□□□ -2.08
ClppO88696 Olfr546-ps1-201ENSMUST00000210328 326 ntBASIC2.06□□□□□ -2.08
ClppO88696 Gm45375-201ENSMUST00000210338 280 ntBASIC2.06□□□□□ -2.08
ClppO88696 Gm17990-201ENSMUST00000211728 553 ntBASIC2.06□□□□□ -2.08
ClppO88696 Gm46312-201ENSMUST00000220961 420 ntBASIC2.06□□□□□ -2.08
ClppO88696 1700030L22Rik-201ENSMUST00000221214 567 ntTSL 5 BASIC2.06□□□□□ -2.08
ClppO88696 Zmynd11-223ENSMUST00000222358 340 ntTSL 5 BASIC2.06□□□□□ -2.08
Retrieved 100 of 76,532 protein–RNA pairs in 79.8 ms