Protein–RNA interactions for Protein: O35988

Sdc4, Syndecan-4, mousemouse

Known RBP Predictions only

Length 198 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sdc4O35988 Gm21905-201ENSMUST00000177616 87 ntAPPRIS P1 TSL 5 BASIC0.92□□□□□ -2.26
Sdc4O35988 Gm21954-201ENSMUST00000179544 51 ntAPPRIS P1 TSL 5 BASIC0.92□□□□□ -2.26
Sdc4O35988 Gm25873-201ENSMUST00000180317 107 ntBASIC0.92□□□□□ -2.26
Sdc4O35988 Gm38149-201ENSMUST00000191943 339 ntBASIC0.92□□□□□ -2.26
Sdc4O35988 Gm44609-201ENSMUST00000207157 460 ntBASIC0.92□□□□□ -2.26
Sdc4O35988 AC156795.1-201ENSMUST00000214655 414 ntBASIC0.92□□□□□ -2.26
Sdc4O35988 Gm46136-201ENSMUST00000214730 565 ntBASIC0.92□□□□□ -2.26
Sdc4O35988 AC123062.1-201ENSMUST00000221287 481 ntBASIC0.92□□□□□ -2.26
Sdc4O35988 AC125532.1-201ENSMUST00000216210 2334 ntBASIC0.91□□□□□ -2.26
Sdc4O35988 Gm22149-201ENSMUST00000104442 136 ntBASIC0.91□□□□□ -2.26
Sdc4O35988 Gm2003-201ENSMUST00000118537 636 ntBASIC0.91□□□□□ -2.26
Sdc4O35988 Gm15309-201ENSMUST00000121644 240 ntBASIC0.91□□□□□ -2.26
Sdc4O35988 Gm3025-201ENSMUST00000163454 489 ntBASIC0.91□□□□□ -2.26
Sdc4O35988 Gm22565-201ENSMUST00000175540 69 ntBASIC0.91□□□□□ -2.26
Sdc4O35988 Gm4076-201ENSMUST00000179230 965 ntBASIC0.91□□□□□ -2.26
Sdc4O35988 Gm27587-201ENSMUST00000185116 163 ntBASIC0.91□□□□□ -2.26
Sdc4O35988 Gm18356-201ENSMUST00000185677 623 ntBASIC0.91□□□□□ -2.26
Sdc4O35988 Gm30484-201ENSMUST00000200327 449 ntTSL 5 BASIC0.91□□□□□ -2.26
Sdc4O35988 4930596I21Rik-201ENSMUST00000200494 461 ntTSL 1 (best) BASIC0.91□□□□□ -2.26
Sdc4O35988 Gm44137-201ENSMUST00000203670 367 ntBASIC0.91□□□□□ -2.26
Sdc4O35988 Gm18242-201ENSMUST00000218455 542 ntBASIC0.91□□□□□ -2.26
Sdc4O35988 AC113031.5-201ENSMUST00000227116 606 ntBASIC0.91□□□□□ -2.26
Sdc4O35988 Mir429-201ENSMUST00000083493 83 ntBASIC0.91□□□□□ -2.26
Sdc4O35988 Olfr136-205ENSMUST00000216963 1821 ntAPPRIS P1 TSL 5 BASIC0.91□□□□□ -2.26
Sdc4O35988 Vmn1r75-207ENSMUST00000228646 4466 ntAPPRIS ALT2 BASIC0.9□□□□□ -2.27
Sdc4O35988 Olfr1098-202ENSMUST00000111574 2885 ntAPPRIS P1 TSL 3 BASIC0.9□□□□□ -2.27
Sdc4O35988 Rhox11-ps2-201ENSMUST00000117962 451 ntBASIC0.9□□□□□ -2.27
Sdc4O35988 Gm14013-201ENSMUST00000119006 270 ntBASIC0.9□□□□□ -2.27
Sdc4O35988 Cdrt4os2-201ENSMUST00000128675 494 ntTSL 2 BASIC0.9□□□□□ -2.27
Sdc4O35988 Gm23124-201ENSMUST00000157650 107 ntBASIC0.9□□□□□ -2.27
Sdc4O35988 Gm26213-201ENSMUST00000158582 110 ntBASIC0.9□□□□□ -2.27
Sdc4O35988 Gm20477-201ENSMUST00000174028 280 ntBASIC0.9□□□□□ -2.27
Sdc4O35988 Trav7d-4-201ENSMUST00000178768 451 ntAPPRIS P1 BASIC0.9□□□□□ -2.27
Sdc4O35988 Trav7-4-201ENSMUST00000181728 451 ntAPPRIS P1 BASIC0.9□□□□□ -2.27
Sdc4O35988 Gm29276-201ENSMUST00000190453 932 ntAPPRIS P1 TSL 1 (best) BASIC0.9□□□□□ -2.27
Sdc4O35988 Gm36966-201ENSMUST00000192217 413 ntBASIC0.9□□□□□ -2.27
Sdc4O35988 Gm44564-201ENSMUST00000207985 180 ntBASIC0.9□□□□□ -2.27
Sdc4O35988 AC123656.2-201ENSMUST00000226726 227 ntBASIC0.9□□□□□ -2.27
Sdc4O35988 CT025602.1-201ENSMUST00000227281 382 ntBASIC0.9□□□□□ -2.27
Sdc4O35988 3830403N18Rik-201ENSMUST00000033458 1022 ntAPPRIS P1 TSL 1 (best) BASIC0.9□□□□□ -2.27
Sdc4O35988 Gm22299-201ENSMUST00000082663 136 ntBASIC0.9□□□□□ -2.27
Sdc4O35988 Gm25683-201ENSMUST00000083940 131 ntBASIC0.9□□□□□ -2.27
Sdc4O35988 Vmn1r178-205ENSMUST00000227993 2518 ntAPPRIS P1 BASIC0.9□□□□□ -2.27
Sdc4O35988 Gm19428-201ENSMUST00000220512 1995 ntBASIC0.89□□□□□ -2.27
Sdc4O35988 Zfp932-207ENSMUST00000187241 1581 ntAPPRIS ALT2 TSL 5 BASIC0.89□□□□□ -2.27
Sdc4O35988 Gm22543-201ENSMUST00000104347 94 ntBASIC0.89□□□□□ -2.27
Sdc4O35988 Gm24079-201ENSMUST00000104352 132 ntBASIC0.89□□□□□ -2.27
Sdc4O35988 Gm2768-201ENSMUST00000121062 250 ntBASIC0.89□□□□□ -2.27
Sdc4O35988 Gm24630-201ENSMUST00000122768 106 ntBASIC0.89□□□□□ -2.27
Sdc4O35988 Gm25294-201ENSMUST00000122791 104 ntBASIC0.89□□□□□ -2.27
Sdc4O35988 Gm11998-201ENSMUST00000146304 972 ntTSL 1 (best) BASIC0.89□□□□□ -2.27
Sdc4O35988 Gm22731-201ENSMUST00000158086 94 ntBASIC0.89□□□□□ -2.27
Sdc4O35988 Gm8114-201ENSMUST00000172225 484 ntBASIC0.89□□□□□ -2.27
Sdc4O35988 Mir3057-201ENSMUST00000175040 91 ntBASIC0.89□□□□□ -2.27
Sdc4O35988 Vmn1r-ps24-201ENSMUST00000175772 900 ntBASIC0.89□□□□□ -2.27
Sdc4O35988 Gm25874-201ENSMUST00000178030 79 ntBASIC0.89□□□□□ -2.27
Sdc4O35988 Mir6382-201ENSMUST00000184055 110 ntBASIC0.89□□□□□ -2.27
Sdc4O35988 Gm27517-201ENSMUST00000184347 236 ntBASIC0.89□□□□□ -2.27
Sdc4O35988 Gm20118-201ENSMUST00000187207 162 ntBASIC0.89□□□□□ -2.27
Sdc4O35988 Gm42533-201ENSMUST00000196247 157 ntBASIC0.89□□□□□ -2.27
Sdc4O35988 Gm44988-201ENSMUST00000203835 1161 ntBASIC0.89□□□□□ -2.27
Sdc4O35988 Olfr1319-ps1-201ENSMUST00000208550 274 ntBASIC0.89□□□□□ -2.27
Sdc4O35988 AC153522.1-201ENSMUST00000220047 1090 ntBASIC0.89□□□□□ -2.27
Sdc4O35988 Ear14-201ENSMUST00000049559 468 ntBASIC0.89□□□□□ -2.27
Sdc4O35988 Gm22005-201ENSMUST00000082795 141 ntBASIC0.89□□□□□ -2.27
Sdc4O35988 Gm23848-201ENSMUST00000083826 106 ntBASIC0.89□□□□□ -2.27
Sdc4O35988 Gm23015-201ENSMUST00000104145 128 ntBASIC0.88□□□□□ -2.27
Sdc4O35988 Gm23983-201ENSMUST00000157142 114 ntBASIC0.88□□□□□ -2.27
Sdc4O35988 Gm27396-201ENSMUST00000157708 58 ntBASIC0.88□□□□□ -2.27
Sdc4O35988 Gm25012-201ENSMUST00000158396 164 ntBASIC0.88□□□□□ -2.27
Sdc4O35988 Gm24863-201ENSMUST00000179499 107 ntBASIC0.88□□□□□ -2.27
Sdc4O35988 Gm21978-201ENSMUST00000179696 377 ntBASIC0.88□□□□□ -2.27
Sdc4O35988 Gm24020-201ENSMUST00000180156 108 ntBASIC0.88□□□□□ -2.27
Sdc4O35988 Scgb2b17-202ENSMUST00000182640 420 ntAPPRIS ALT2 TSL 3 BASIC0.88□□□□□ -2.27
Sdc4O35988 Mir6394-201ENSMUST00000184738 99 ntBASIC0.88□□□□□ -2.27
Sdc4O35988 Gm28283-201ENSMUST00000185509 178 ntBASIC0.88□□□□□ -2.27
Sdc4O35988 Gm28881-201ENSMUST00000187710 470 ntTSL 3 BASIC0.88□□□□□ -2.27
Sdc4O35988 Gm28643-201ENSMUST00000188811 356 ntTSL 5 BASIC0.88□□□□□ -2.27
Sdc4O35988 Gm42925-201ENSMUST00000197359 285 ntBASIC0.88□□□□□ -2.27
Sdc4O35988 Gm44482-201ENSMUST00000199232 103 ntBASIC0.88□□□□□ -2.27
Sdc4O35988 Gm42506-201ENSMUST00000202009 150 ntBASIC0.88□□□□□ -2.27
Sdc4O35988 AC113305.1-201ENSMUST00000214664 724 ntBASIC0.88□□□□□ -2.27
Sdc4O35988 AC152951.1-201ENSMUST00000218907 266 ntBASIC0.88□□□□□ -2.27
Sdc4O35988 AC131759.1-201ENSMUST00000220642 310 ntTSL 3 BASIC0.88□□□□□ -2.27
Sdc4O35988 AC192334.2-201ENSMUST00000223087 1091 ntBASIC0.88□□□□□ -2.27
Sdc4O35988 CT030684.2-201ENSMUST00000228946 826 ntBASIC0.88□□□□□ -2.27
Sdc4O35988 Olfr821-201ENSMUST00000054364 933 ntAPPRIS P1 BASIC0.88□□□□□ -2.27
Sdc4O35988 Cysltr1-201ENSMUST00000064892 1059 ntAPPRIS P1 TSL 2 BASIC0.88□□□□□ -2.27
Sdc4O35988 Gm24610-201ENSMUST00000083270 109 ntBASIC0.88□□□□□ -2.27
Sdc4O35988 Olfr1316-201ENSMUST00000099596 945 ntAPPRIS P2 BASIC0.88□□□□□ -2.27
Sdc4O35988 Gm44240-201ENSMUST00000204015 2654 ntBASIC0.88□□□□□ -2.27
Sdc4O35988 Gm37096-201ENSMUST00000192317 2058 ntBASIC0.87□□□□□ -2.27
Sdc4O35988 Gm12370-201ENSMUST00000117809 604 ntBASIC0.87□□□□□ -2.27
Sdc4O35988 Defa-ps13-201ENSMUST00000120695 204 ntBASIC0.87□□□□□ -2.27
Sdc4O35988 Gm15167-201ENSMUST00000121997 187 ntBASIC0.87□□□□□ -2.27
Sdc4O35988 Gm23206-201ENSMUST00000122720 184 ntBASIC0.87□□□□□ -2.27
Sdc4O35988 Gm23170-201ENSMUST00000157158 106 ntBASIC0.87□□□□□ -2.27
Sdc4O35988 Gm24419-201ENSMUST00000157875 332 ntBASIC0.87□□□□□ -2.27
Sdc4O35988 Gm25933-201ENSMUST00000178943 108 ntBASIC0.87□□□□□ -2.27
Sdc4O35988 Gm25457-201ENSMUST00000179509 107 ntBASIC0.87□□□□□ -2.27
Retrieved 100 of 76,532 protein–RNA pairs in 88.7 ms