Protein–RNA interactions for Protein: G3X8Y1

Trim55, MCG19772, mousemouse

Predictions only

Length 545 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim55G3X8Y1 Gm24594-201ENSMUST00000122502 99 ntBASIC3.42□□□□□ -1.86
Trim55G3X8Y1 Gm26024-201ENSMUST00000158657 322 ntBASIC3.42□□□□□ -1.86
Trim55G3X8Y1 Gm16405-201ENSMUST00000169247 468 ntAPPRIS P1 TSL 3 BASIC3.42□□□□□ -1.86
Trim55G3X8Y1 AC154297.1-201ENSMUST00000171334 397 ntBASIC3.42□□□□□ -1.86
Trim55G3X8Y1 Gm25748-201ENSMUST00000175487 70 ntBASIC3.42□□□□□ -1.86
Trim55G3X8Y1 Gm22120-201ENSMUST00000175590 70 ntBASIC3.42□□□□□ -1.86
Trim55G3X8Y1 Gm24388-201ENSMUST00000177872 107 ntBASIC3.42□□□□□ -1.86
Trim55G3X8Y1 Gm7958-201ENSMUST00000178255 468 ntBASIC3.42□□□□□ -1.86
Trim55G3X8Y1 Gm7950-201ENSMUST00000179633 468 ntBASIC3.42□□□□□ -1.86
Trim55G3X8Y1 Gm27470-201ENSMUST00000184070 210 ntBASIC3.42□□□□□ -1.86
Trim55G3X8Y1 Selenok-ps5-201ENSMUST00000221048 278 ntBASIC3.42□□□□□ -1.86
Trim55G3X8Y1 Gm24164-201ENSMUST00000093663 104 ntBASIC3.42□□□□□ -1.86
Trim55G3X8Y1 Vmn1r82-203ENSMUST00000227672 3651 ntBASIC3.42□□□□□ -1.86
Trim55G3X8Y1 Vmn2r68-201ENSMUST00000061074 2556 ntAPPRIS P1 TSL 5 BASIC3.42□□□□□ -1.86
Trim55G3X8Y1 Olfr186-203ENSMUST00000216415 2323 ntAPPRIS P1 TSL 5 BASIC3.42□□□□□ -1.86
Trim55G3X8Y1 Olfr839-ps1-201ENSMUST00000212127 7759 ntAPPRIS P1 TSL 5 BASIC3.42□□□□□ -1.86
Trim55G3X8Y1 Olfr1354-202ENSMUST00000204587 3781 ntAPPRIS P1 TSL 2 BASIC3.41□□□□□ -1.86
Trim55G3X8Y1 Gm8473-201ENSMUST00000176697 1885 ntBASIC3.41□□□□□ -1.86
Trim55G3X8Y1 Olr1-201ENSMUST00000032265 3572 ntAPPRIS P3 TSL 1 (best) BASIC3.41□□□□□ -1.86
Trim55G3X8Y1 Olfr1228-202ENSMUST00000215447 3223 ntAPPRIS ALT2 TSL 2 BASIC3.41□□□□□ -1.86
Trim55G3X8Y1 Olfr789-201ENSMUST00000213236 4235 ntAPPRIS P1 TSL 5 BASIC3.41□□□□□ -1.86
Trim55G3X8Y1 Igkv2-109-201ENSMUST00000103322 374 ntAPPRIS P1 BASIC3.41□□□□□ -1.86
Trim55G3X8Y1 Gm24581-201ENSMUST00000103962 133 ntBASIC3.41□□□□□ -1.86
Trim55G3X8Y1 Gm24119-201ENSMUST00000103979 246 ntBASIC3.41□□□□□ -1.86
Trim55G3X8Y1 Gm25833-201ENSMUST00000104137 133 ntBASIC3.41□□□□□ -1.86
Trim55G3X8Y1 Mir466h-201ENSMUST00000104748 81 ntBASIC3.41□□□□□ -1.86
Trim55G3X8Y1 Gm15799-201ENSMUST00000120899 289 ntBASIC3.41□□□□□ -1.86
Trim55G3X8Y1 Gm12155-201ENSMUST00000121267 160 ntBASIC3.41□□□□□ -1.86
Trim55G3X8Y1 Gm26027-201ENSMUST00000122725 268 ntBASIC3.41□□□□□ -1.86
Trim55G3X8Y1 Gm12162-202ENSMUST00000129432 127 ntTSL 5 BASIC3.41□□□□□ -1.86
Trim55G3X8Y1 Gm15961-201ENSMUST00000156090 266 ntTSL 3 BASIC3.41□□□□□ -1.86
Trim55G3X8Y1 Gm24244-201ENSMUST00000157317 130 ntBASIC3.41□□□□□ -1.86
Trim55G3X8Y1 Gm23592-201ENSMUST00000157859 117 ntBASIC3.41□□□□□ -1.86
Trim55G3X8Y1 Gm21827-201ENSMUST00000178247 423 ntBASIC3.41□□□□□ -1.86
Trim55G3X8Y1 Gm17067-202ENSMUST00000180131 123 ntBASIC3.41□□□□□ -1.86
Trim55G3X8Y1 Mir6399-201ENSMUST00000184050 84 ntBASIC3.41□□□□□ -1.86
Trim55G3X8Y1 Gm29408-201ENSMUST00000187536 216 ntBASIC3.41□□□□□ -1.86
Trim55G3X8Y1 Gm37791-201ENSMUST00000195081 286 ntBASIC3.41□□□□□ -1.86
Trim55G3X8Y1 Gm34411-201ENSMUST00000201180 280 ntTSL 3 BASIC3.41□□□□□ -1.86
Trim55G3X8Y1 Gm19563-201ENSMUST00000222031 270 ntBASIC3.41□□□□□ -1.86
Trim55G3X8Y1 Gm3829-201ENSMUST00000222362 619 ntBASIC3.41□□□□□ -1.86
Trim55G3X8Y1 Gm23462-201ENSMUST00000083264 104 ntBASIC3.41□□□□□ -1.86
Trim55G3X8Y1 Gm43875-201ENSMUST00000203319 2475 ntBASIC3.41□□□□□ -1.86
Trim55G3X8Y1 Gm37402-201ENSMUST00000194525 5000 ntBASIC3.41□□□□□ -1.86
Trim55G3X8Y1 Zfp945-205ENSMUST00000160457 6497 ntAPPRIS P4 TSL 1 (best) BASIC3.4□□□□□ -1.86
Trim55G3X8Y1 Vmn2r-ps47-201ENSMUST00000174515 2557 ntBASIC3.4□□□□□ -1.86
Trim55G3X8Y1 Snord14c-201ENSMUST00000101927 86 ntBASIC3.4□□□□□ -1.87
Trim55G3X8Y1 Gm23013-201ENSMUST00000104146 106 ntBASIC3.4□□□□□ -1.87
Trim55G3X8Y1 Gm12797-201ENSMUST00000118645 273 ntBASIC3.4□□□□□ -1.87
Trim55G3X8Y1 Gm12080-201ENSMUST00000119821 1883 ntBASIC3.4□□□□□ -1.87
Trim55G3X8Y1 Gm6574-201ENSMUST00000120037 362 ntBASIC3.4□□□□□ -1.87
Trim55G3X8Y1 Gm15466-201ENSMUST00000122299 333 ntBASIC3.4□□□□□ -1.87
Trim55G3X8Y1 Gm16533-201ENSMUST00000140035 228 ntBASIC3.4□□□□□ -1.87
Trim55G3X8Y1 Ppp1r2-ps7-201ENSMUST00000140102 609 ntBASIC3.4□□□□□ -1.87
Trim55G3X8Y1 Gm25115-201ENSMUST00000157187 140 ntBASIC3.4□□□□□ -1.87
Trim55G3X8Y1 Gm22145-201ENSMUST00000157396 148 ntBASIC3.4□□□□□ -1.87
Trim55G3X8Y1 Tshb-202ENSMUST00000170856 552 ntAPPRIS P1 TSL 5 BASIC3.4□□□□□ -1.87
Trim55G3X8Y1 Gm28627-201ENSMUST00000186141 453 ntBASIC3.4□□□□□ -1.87
Trim55G3X8Y1 Mrgprb1-203ENSMUST00000188918 435 ntTSL 3 BASIC3.4□□□□□ -1.87
Trim55G3X8Y1 Gm45533-201ENSMUST00000210295 165 ntTSL 5 BASIC3.4□□□□□ -1.87
Trim55G3X8Y1 Gm45430-201ENSMUST00000211276 260 ntTSL 5 BASIC3.4□□□□□ -1.87
Trim55G3X8Y1 Olfr1231-202ENSMUST00000216144 3961 ntAPPRIS P1 TSL 3 BASIC3.4□□□□□ -1.87
Trim55G3X8Y1 AC159188.1-201ENSMUST00000225198 526 ntBASIC3.4□□□□□ -1.87
Trim55G3X8Y1 AC134860.6-201ENSMUST00000226038 285 ntBASIC3.4□□□□□ -1.87
Trim55G3X8Y1 Mir125b-2-201ENSMUST00000083538 71 ntBASIC3.4□□□□□ -1.87
Trim55G3X8Y1 Mir323-201ENSMUST00000083683 86 ntBASIC3.4□□□□□ -1.87
Trim55G3X8Y1 Mgat4c-201ENSMUST00000020039 3735 ntAPPRIS P1 TSL 1 (best) BASIC3.4□□□□□ -1.87
Trim55G3X8Y1 Gm43780-201ENSMUST00000196510 3600 ntBASIC3.4□□□□□ -1.87
Trim55G3X8Y1 Gm45130-201ENSMUST00000207574 3388 ntBASIC3.39□□□□□ -1.87
Trim55G3X8Y1 Gm22270-201ENSMUST00000104034 132 ntBASIC3.39□□□□□ -1.87
Trim55G3X8Y1 Gm22658-201ENSMUST00000104196 155 ntBASIC3.39□□□□□ -1.87
Trim55G3X8Y1 Gm26418-201ENSMUST00000104275 137 ntBASIC3.39□□□□□ -1.87
Trim55G3X8Y1 Cyp4b1-ps2-201ENSMUST00000119563 333 ntBASIC3.39□□□□□ -1.87
Trim55G3X8Y1 Gm12335-201ENSMUST00000119738 327 ntBASIC3.39□□□□□ -1.87
Trim55G3X8Y1 Gm14069-201ENSMUST00000120815 229 ntBASIC3.39□□□□□ -1.87
Trim55G3X8Y1 Gm24892-201ENSMUST00000122747 104 ntBASIC3.39□□□□□ -1.87
Trim55G3X8Y1 Gm15008-201ENSMUST00000147429 460 ntTSL 3 BASIC3.39□□□□□ -1.87
Trim55G3X8Y1 Gm26276-201ENSMUST00000157099 109 ntBASIC3.39□□□□□ -1.87
Trim55G3X8Y1 Gm25720-201ENSMUST00000157503 105 ntBASIC3.39□□□□□ -1.87
Trim55G3X8Y1 Gm22382-201ENSMUST00000158185 130 ntBASIC3.39□□□□□ -1.87
Trim55G3X8Y1 Gm25436-201ENSMUST00000158275 145 ntBASIC3.39□□□□□ -1.87
Trim55G3X8Y1 Mir7658-201ENSMUST00000184043 57 ntBASIC3.39□□□□□ -1.87
Trim55G3X8Y1 Gm27582-201ENSMUST00000184084 126 ntBASIC3.39□□□□□ -1.87
Trim55G3X8Y1 Olfr797-ps1-201ENSMUST00000203614 415 ntBASIC3.39□□□□□ -1.87
Trim55G3X8Y1 Gm44459-201ENSMUST00000203926 160 ntBASIC3.39□□□□□ -1.87
Trim55G3X8Y1 Gm36546-201ENSMUST00000206372 230 ntTSL 5 BASIC3.39□□□□□ -1.87
Trim55G3X8Y1 Gm9712-201ENSMUST00000210842 311 ntBASIC3.39□□□□□ -1.87
Trim55G3X8Y1 Gm35405-201ENSMUST00000218754 400 ntBASIC3.39□□□□□ -1.87
Trim55G3X8Y1 4930567K20Rik-204ENSMUST00000220270 445 ntTSL 1 (best) BASIC3.39□□□□□ -1.87
Trim55G3X8Y1 Gm4036-201ENSMUST00000220842 626 ntBASIC3.39□□□□□ -1.87
Trim55G3X8Y1 1700010L04Rik-201ENSMUST00000032872 330 ntTSL 5 BASIC3.39□□□□□ -1.87
Trim55G3X8Y1 Gm24457-201ENSMUST00000083196 105 ntBASIC3.39□□□□□ -1.87
Trim55G3X8Y1 Ctdspl2-202ENSMUST00000110572 4160 ntTSL 5 BASIC3.39□□□□□ -1.87
Trim55G3X8Y1 Vmn1r87-202ENSMUST00000211249 1835 ntAPPRIS P1 TSL 3 BASIC3.39□□□□□ -1.87
Trim55G3X8Y1 AC153526.2-201ENSMUST00000218206 2031 ntBASIC3.39□□□□□ -1.87
Trim55G3X8Y1 2410141K09Rik-202ENSMUST00000172579 2587 ntAPPRIS P1 TSL 3 BASIC3.38□□□□□ -1.87
Trim55G3X8Y1 Olfr748-202ENSMUST00000213101 3632 ntAPPRIS P1 TSL 5 BASIC3.38□□□□□ -1.87
Trim55G3X8Y1 Gm15497-201ENSMUST00000119137 551 ntBASIC3.38□□□□□ -1.87
Trim55G3X8Y1 Gm14215-201ENSMUST00000120578 221 ntBASIC3.38□□□□□ -1.87
Trim55G3X8Y1 Gm13667-201ENSMUST00000132332 617 ntTSL 5 BASIC3.38□□□□□ -1.87
Retrieved 100 of 76,532 protein–RNA pairs in 81.4 ms