Protein–RNA interactions for Protein: E9PXC0

Srp54b, Signal recognition particle 54 kDa protein, mousemouse

Predictions only

Length 504 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Srp54bE9PXC0 Gm14215-201ENSMUST00000120578 221 ntBASIC2.19□□□□□ -2.06
Srp54bE9PXC0 Gm13976-201ENSMUST00000154367 479 ntTSL 3 BASIC2.19□□□□□ -2.06
Srp54bE9PXC0 Gm22535-201ENSMUST00000158174 119 ntBASIC2.19□□□□□ -2.06
Srp54bE9PXC0 Gm16561-201ENSMUST00000163001 192 ntBASIC2.19□□□□□ -2.06
Srp54bE9PXC0 Obox4-ps34-201ENSMUST00000175879 520 ntBASIC2.19□□□□□ -2.06
Srp54bE9PXC0 Gm18356-201ENSMUST00000185677 623 ntBASIC2.19□□□□□ -2.06
Srp54bE9PXC0 Gm28740-201ENSMUST00000186142 215 ntBASIC2.19□□□□□ -2.06
Srp54bE9PXC0 Gm29134-201ENSMUST00000186579 126 ntBASIC2.19□□□□□ -2.06
Srp54bE9PXC0 Gm28337-201ENSMUST00000190425 666 ntBASIC2.19□□□□□ -2.06
Srp54bE9PXC0 Gm44083-201ENSMUST00000203114 337 ntBASIC2.19□□□□□ -2.06
Srp54bE9PXC0 Olfr546-ps1-201ENSMUST00000210328 326 ntBASIC2.19□□□□□ -2.06
Srp54bE9PXC0 AC114010.1-201ENSMUST00000222060 379 ntBASIC2.19□□□□□ -2.06
Srp54bE9PXC0 Pip-201ENSMUST00000075351 588 ntAPPRIS P1 TSL 1 (best) BASIC2.19□□□□□ -2.06
Srp54bE9PXC0 2610044O15Rik8-201ENSMUST00000079272 264 ntTSL 5 BASIC2.19□□□□□ -2.06
Srp54bE9PXC0 Mir222-201ENSMUST00000083537 79 ntBASIC2.19□□□□□ -2.06
Srp54bE9PXC0 Vmn1r83-202ENSMUST00000226701 2788 ntAPPRIS P1 BASIC2.18□□□□□ -2.06
Srp54bE9PXC0 Vmn1r178-205ENSMUST00000227993 2518 ntAPPRIS P1 BASIC2.18□□□□□ -2.06
Srp54bE9PXC0 Gm11008-201ENSMUST00000109032 622 ntTSL 5 BASIC2.18□□□□□ -2.06
Srp54bE9PXC0 Rpl31-ps6-201ENSMUST00000119959 378 ntBASIC2.18□□□□□ -2.06
Srp54bE9PXC0 Tslrn1-201ENSMUST00000129479 747 ntTSL 3 BASIC2.18□□□□□ -2.06
Srp54bE9PXC0 Gm13324-201ENSMUST00000148607 569 ntTSL 3 BASIC2.18□□□□□ -2.06
Srp54bE9PXC0 1700047A11Rik-202ENSMUST00000153552 622 ntTSL 1 (best) BASIC2.18□□□□□ -2.06
Srp54bE9PXC0 Gm23642-201ENSMUST00000157858 258 ntBASIC2.18□□□□□ -2.06
Srp54bE9PXC0 Gm25488-201ENSMUST00000158728 118 ntBASIC2.18□□□□□ -2.06
Srp54bE9PXC0 Gm17148-201ENSMUST00000164702 249 ntBASIC2.18□□□□□ -2.06
Srp54bE9PXC0 Mir6997-201ENSMUST00000184313 71 ntBASIC2.18□□□□□ -2.06
Srp54bE9PXC0 Gm44465-201ENSMUST00000199536 114 ntBASIC2.18□□□□□ -2.06
Srp54bE9PXC0 Gm30784-201ENSMUST00000204491 794 ntTSL 2 BASIC2.18□□□□□ -2.06
Srp54bE9PXC0 Tnfrsf23-203ENSMUST00000208017 544 ntTSL 3 BASIC2.18□□□□□ -2.06
Srp54bE9PXC0 AC116589.3-202ENSMUST00000221770 649 ntBASIC2.18□□□□□ -2.06
Srp54bE9PXC0 AC116589.6-201ENSMUST00000222252 649 ntBASIC2.18□□□□□ -2.06
Srp54bE9PXC0 Gm18617-201ENSMUST00000222311 259 ntBASIC2.18□□□□□ -2.06
Srp54bE9PXC0 Zmynd11-223ENSMUST00000222358 340 ntTSL 5 BASIC2.18□□□□□ -2.06
Srp54bE9PXC0 Gm45941-202ENSMUST00000223144 389 ntTSL 2 BASIC2.18□□□□□ -2.06
Srp54bE9PXC0 Gm6109-201ENSMUST00000223297 348 ntBASIC2.18□□□□□ -2.06
Srp54bE9PXC0 Mir30d-201ENSMUST00000083503 82 ntBASIC2.18□□□□□ -2.06
Srp54bE9PXC0 Gm22866-201ENSMUST00000083947 177 ntBASIC2.18□□□□□ -2.06
Srp54bE9PXC0 Gpr174-204ENSMUST00000120971 3588 ntAPPRIS P1 TSL 1 (best) BASIC2.18□□□□□ -2.06
Srp54bE9PXC0 Gm45558-201ENSMUST00000209384 1895 ntBASIC2.18□□□□□ -2.06
Srp54bE9PXC0 Gm38388-201ENSMUST00000195569 1430 ntBASIC2.17□□□□□ -2.06
Srp54bE9PXC0 Gm42635-201ENSMUST00000200266 2571 ntBASIC2.17□□□□□ -2.06
Srp54bE9PXC0 Gm24338-201ENSMUST00000104205 127 ntBASIC2.17□□□□□ -2.06
Srp54bE9PXC0 Mdga2-203ENSMUST00000113942 423 ntBASIC2.17□□□□□ -2.06
Srp54bE9PXC0 Gm15010-201ENSMUST00000117153 407 ntBASIC2.17□□□□□ -2.06
Srp54bE9PXC0 Gm15844-201ENSMUST00000118016 576 ntBASIC2.17□□□□□ -2.06
Srp54bE9PXC0 Rps13-ps8-201ENSMUST00000118906 401 ntBASIC2.17□□□□□ -2.06
Srp54bE9PXC0 Gm12162-202ENSMUST00000129432 127 ntTSL 5 BASIC2.17□□□□□ -2.06
Srp54bE9PXC0 Gm24010-201ENSMUST00000157731 282 ntBASIC2.17□□□□□ -2.06
Srp54bE9PXC0 Gm22554-201ENSMUST00000157798 147 ntBASIC2.17□□□□□ -2.06
Srp54bE9PXC0 Gm27510-201ENSMUST00000158214 64 ntBASIC2.17□□□□□ -2.06
Srp54bE9PXC0 Gm24577-201ENSMUST00000158580 63 ntBASIC2.17□□□□□ -2.06
Srp54bE9PXC0 Mir6376-201ENSMUST00000185149 131 ntBASIC2.17□□□□□ -2.06
Srp54bE9PXC0 1700031L13Rik-204ENSMUST00000188072 812 ntTSL 5 BASIC2.17□□□□□ -2.06
Srp54bE9PXC0 Trbv18-201ENSMUST00000194256 294 ntBASIC2.17□□□□□ -2.06
Srp54bE9PXC0 AC155715.1-201ENSMUST00000213575 463 ntBASIC2.17□□□□□ -2.06
Srp54bE9PXC0 Gm46312-201ENSMUST00000220961 420 ntBASIC2.17□□□□□ -2.06
Srp54bE9PXC0 AC159632.1-201ENSMUST00000221808 317 ntTSL 1 (best) BASIC2.17□□□□□ -2.06
Srp54bE9PXC0 Klra3-201ENSMUST00000088017 984 ntAPPRIS P1 TSL 1 (best) BASIC2.17□□□□□ -2.06
Srp54bE9PXC0 BC100530-201ENSMUST00000096089 619 ntAPPRIS P1 TSL 1 (best) BASIC2.17□□□□□ -2.06
Srp54bE9PXC0 Gm42482-201ENSMUST00000198904 1947 ntBASIC2.17□□□□□ -2.06
Srp54bE9PXC0 Gm24172-201ENSMUST00000104127 117 ntBASIC2.16□□□□□ -2.06
Srp54bE9PXC0 Gm22678-201ENSMUST00000116974 101 ntBASIC2.16□□□□□ -2.06
Srp54bE9PXC0 Gm13457-201ENSMUST00000117885 267 ntBASIC2.16□□□□□ -2.06
Srp54bE9PXC0 Gm14652-201ENSMUST00000118479 235 ntBASIC2.16□□□□□ -2.06
Srp54bE9PXC0 Gm25910-201ENSMUST00000157620 140 ntBASIC2.16□□□□□ -2.06
Srp54bE9PXC0 Gm23381-201ENSMUST00000157676 94 ntBASIC2.16□□□□□ -2.06
Srp54bE9PXC0 Gm22654-201ENSMUST00000157874 105 ntBASIC2.16□□□□□ -2.06
Srp54bE9PXC0 Gm24498-201ENSMUST00000158445 102 ntBASIC2.16□□□□□ -2.06
Srp54bE9PXC0 Gm25711-201ENSMUST00000158633 128 ntBASIC2.16□□□□□ -2.06
Srp54bE9PXC0 Cypt14-201ENSMUST00000179096 508 ntAPPRIS P1 TSL 1 (best) BASIC2.16□□□□□ -2.06
Srp54bE9PXC0 Gm26979-201ENSMUST00000182971 217 ntTSL 3 BASIC2.16□□□□□ -2.06
Srp54bE9PXC0 Gm28489-201ENSMUST00000186655 316 ntBASIC2.16□□□□□ -2.06
Srp54bE9PXC0 Gm28494-201ENSMUST00000187687 562 ntTSL 5 BASIC2.16□□□□□ -2.06
Srp54bE9PXC0 Gm34073-201ENSMUST00000195736 212 ntBASIC2.16□□□□□ -2.06
Srp54bE9PXC0 Gm44320-201ENSMUST00000199276 86 ntBASIC2.16□□□□□ -2.06
Srp54bE9PXC0 CT030166.2-201ENSMUST00000222021 368 ntBASIC2.16□□□□□ -2.06
Srp54bE9PXC0 Gm20102-201ENSMUST00000222445 220 ntBASIC2.16□□□□□ -2.06
Srp54bE9PXC0 CT025603.4-201ENSMUST00000225777 413 ntBASIC2.16□□□□□ -2.06
Srp54bE9PXC0 AC124104.1-201ENSMUST00000226279 417 ntBASIC2.16□□□□□ -2.06
Srp54bE9PXC0 Gm26457-201ENSMUST00000082678 78 ntBASIC2.16□□□□□ -2.06
Srp54bE9PXC0 Gm23462-201ENSMUST00000083264 104 ntBASIC2.16□□□□□ -2.06
Srp54bE9PXC0 Snhg14-213ENSMUST00000190666 3708 ntTSL 1 (best) BASIC2.16□□□□□ -2.06
Srp54bE9PXC0 Olfr1496-202ENSMUST00000209137 2394 ntAPPRIS ALT1 TSL 5 BASIC2.16□□□□□ -2.06
Srp54bE9PXC0 Gm15088-201ENSMUST00000117973 1508 ntBASIC2.16□□□□□ -2.06
Srp54bE9PXC0 Gm15098-201ENSMUST00000119036 1508 ntBASIC2.16□□□□□ -2.06
Srp54bE9PXC0 Mir701-201ENSMUST00000102208 109 ntBASIC2.15□□□□□ -2.07
Srp54bE9PXC0 Cypt15-201ENSMUST00000115114 519 ntAPPRIS P1 TSL 1 (best) BASIC2.15□□□□□ -2.07
Srp54bE9PXC0 Rps15a-ps6-201ENSMUST00000117476 393 ntBASIC2.15□□□□□ -2.07
Srp54bE9PXC0 Gm11386-201ENSMUST00000117761 347 ntBASIC2.15□□□□□ -2.07
Srp54bE9PXC0 Gm14748-201ENSMUST00000119819 411 ntBASIC2.15□□□□□ -2.07
Srp54bE9PXC0 Gm25625-201ENSMUST00000157221 96 ntBASIC2.15□□□□□ -2.07
Srp54bE9PXC0 Vmn2r-ps34-201ENSMUST00000177433 904 ntBASIC2.15□□□□□ -2.07
Srp54bE9PXC0 Gm25457-201ENSMUST00000179509 107 ntBASIC2.15□□□□□ -2.07
Srp54bE9PXC0 Gm26897-201ENSMUST00000180627 93 ntAPPRIS P1 TSL 5 BASIC2.15□□□□□ -2.07
Srp54bE9PXC0 Gm27991-201ENSMUST00000184804 137 ntBASIC2.15□□□□□ -2.07
Srp54bE9PXC0 Mir8090-201ENSMUST00000185078 136 ntBASIC2.15□□□□□ -2.07
Srp54bE9PXC0 Gm29069-201ENSMUST00000185857 675 ntTSL 3 BASIC2.15□□□□□ -2.07
Srp54bE9PXC0 Gm28927-201ENSMUST00000191528 272 ntBASIC2.15□□□□□ -2.07
Srp54bE9PXC0 Gm37923-201ENSMUST00000191624 161 ntBASIC2.15□□□□□ -2.07
Srp54bE9PXC0 Gm40040-202ENSMUST00000196337 305 ntTSL 3 BASIC2.15□□□□□ -2.07
Retrieved 100 of 76,532 protein–RNA pairs in 84.9 ms