Protein–RNA interactions for Protein: A2AX52

Col6a4, Collagen alpha-4(VI) chain, mousemouse

Predictions only

Length 2,309 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col6a4A2AX52 Scgb1b13-ps-201ENSMUST00000187330 273 ntBASIC0.64□□□□□ -2.31
Col6a4A2AX52 Igkv2-95-1-201ENSMUST00000200279 272 ntBASIC0.64□□□□□ -2.31
Col6a4A2AX52 Gm39154-201ENSMUST00000210257 560 ntTSL 5 BASIC0.64□□□□□ -2.31
Col6a4A2AX52 Gm7692-201ENSMUST00000213534 409 ntBASIC0.64□□□□□ -2.31
Col6a4A2AX52 Gm26175-201ENSMUST00000083794 131 ntBASIC0.64□□□□□ -2.31
Col6a4A2AX52 Gm10780-201ENSMUST00000099459 285 ntBASIC0.64□□□□□ -2.31
Col6a4A2AX52 Gm11065-201ENSMUST00000111462 228 ntBASIC0.64□□□□□ -2.31
Col6a4A2AX52 Gm23983-201ENSMUST00000157142 114 ntBASIC0.64□□□□□ -2.31
Col6a4A2AX52 Gm23196-201ENSMUST00000158806 107 ntBASIC0.64□□□□□ -2.31
Col6a4A2AX52 Gm25838-201ENSMUST00000158920 120 ntBASIC0.64□□□□□ -2.31
Col6a4A2AX52 Gm17061-201ENSMUST00000163167 499 ntBASIC0.64□□□□□ -2.31
Col6a4A2AX52 Trav5d-3-201ENSMUST00000170041 270 ntBASIC0.64□□□□□ -2.31
Col6a4A2AX52 Gm22802-201ENSMUST00000175621 89 ntBASIC0.64□□□□□ -2.31
Col6a4A2AX52 Gm21744-201ENSMUST00000178403 662 ntBASIC0.64□□□□□ -2.31
Col6a4A2AX52 4932441J04Rik-201ENSMUST00000180708 729 ntTSL 1 (best) BASIC0.64□□□□□ -2.31
Col6a4A2AX52 Gm26979-201ENSMUST00000182971 217 ntTSL 3 BASIC0.64□□□□□ -2.31
Col6a4A2AX52 Obox4-ps39-201ENSMUST00000184306 628 ntBASIC0.64□□□□□ -2.31
Col6a4A2AX52 Gm29413-201ENSMUST00000186019 880 ntBASIC0.64□□□□□ -2.31
Col6a4A2AX52 Gm28870-201ENSMUST00000187033 880 ntAPPRIS P1 TSL 5 BASIC0.64□□□□□ -2.31
Col6a4A2AX52 Gm28700-201ENSMUST00000187614 579 ntBASIC0.64□□□□□ -2.31
Col6a4A2AX52 Gm29639-201ENSMUST00000188375 580 ntBASIC0.64□□□□□ -2.31
Col6a4A2AX52 Gm28843-201ENSMUST00000189198 678 ntBASIC0.64□□□□□ -2.31
Col6a4A2AX52 Gm29546-201ENSMUST00000191171 678 ntBASIC0.64□□□□□ -2.31
Col6a4A2AX52 Gm3952-201ENSMUST00000195093 573 ntAPPRIS P1 TSL 5 BASIC0.64□□□□□ -2.31
Col6a4A2AX52 A530053G22Rik-204ENSMUST00000204579 536 ntTSL 2 BASIC0.64□□□□□ -2.31
Col6a4A2AX52 Gm45387-201ENSMUST00000209792 632 ntBASIC0.64□□□□□ -2.31
Col6a4A2AX52 Gm45912-201ENSMUST00000210646 543 ntBASIC0.64□□□□□ -2.31
Col6a4A2AX52 AC163357.1-201ENSMUST00000220847 233 ntBASIC0.64□□□□□ -2.31
Col6a4A2AX52 Stfa2-201ENSMUST00000023619 423 ntAPPRIS P1 TSL 1 (best) BASIC0.64□□□□□ -2.31
Col6a4A2AX52 Gm22443-201ENSMUST00000082890 107 ntBASIC0.64□□□□□ -2.31
Col6a4A2AX52 Gm18795-202ENSMUST00000223373 2920 ntBASIC0.63□□□□□ -2.31
Col6a4A2AX52 Gm13723-201ENSMUST00000130722 5036 ntAPPRIS P1 TSL 2 BASIC0.63□□□□□ -2.31
Col6a4A2AX52 Gm13885-201ENSMUST00000117569 187 ntBASIC0.63□□□□□ -2.31
Col6a4A2AX52 Gm15274-201ENSMUST00000131442 291 ntBASIC0.63□□□□□ -2.31
Col6a4A2AX52 Gm21979-201ENSMUST00000139887 291 ntBASIC0.63□□□□□ -2.31
Col6a4A2AX52 Gm15259-201ENSMUST00000151262 291 ntBASIC0.63□□□□□ -2.31
Col6a4A2AX52 Snord11-201ENSMUST00000158468 84 ntBASIC0.63□□□□□ -2.31
Col6a4A2AX52 Gm18397-201ENSMUST00000176704 587 ntBASIC0.63□□□□□ -2.31
Col6a4A2AX52 Mir7077-201ENSMUST00000183991 57 ntBASIC0.63□□□□□ -2.31
Col6a4A2AX52 Gm29603-201ENSMUST00000186792 334 ntBASIC0.63□□□□□ -2.31
Col6a4A2AX52 Gm18296-201ENSMUST00000192475 783 ntBASIC0.63□□□□□ -2.31
Col6a4A2AX52 Gm44564-201ENSMUST00000207985 180 ntBASIC0.63□□□□□ -2.31
Col6a4A2AX52 AC102352.1-201ENSMUST00000224187 582 ntBASIC0.63□□□□□ -2.31
Col6a4A2AX52 Olfr821-201ENSMUST00000054364 933 ntAPPRIS P1 BASIC0.63□□□□□ -2.31
Col6a4A2AX52 Gm6358-201ENSMUST00000089101 156 ntAPPRIS ALT2 BASIC0.63□□□□□ -2.31
Col6a4A2AX52 Gm10770-201ENSMUST00000099418 714 ntAPPRIS P1 TSL 5 BASIC0.63□□□□□ -2.31
Col6a4A2AX52 Hsf3-202ENSMUST00000119035 2691 ntTSL 1 (best) BASIC0.63□□□□□ -2.31
Col6a4A2AX52 Gm25213-201ENSMUST00000102388 113 ntBASIC0.63□□□□□ -2.31
Col6a4A2AX52 Gm22544-201ENSMUST00000104349 127 ntBASIC0.63□□□□□ -2.31
Col6a4A2AX52 Gm12016-201ENSMUST00000119079 681 ntBASIC0.63□□□□□ -2.31
Col6a4A2AX52 Gm11991-201ENSMUST00000119652 1074 ntBASIC0.63□□□□□ -2.31
Col6a4A2AX52 Gm14530-201ENSMUST00000122391 333 ntBASIC0.63□□□□□ -2.31
Col6a4A2AX52 Gm15563-201ENSMUST00000124953 410 ntTSL 3 BASIC0.63□□□□□ -2.31
Col6a4A2AX52 Rpl23a-ps12-201ENSMUST00000179178 468 ntBASIC0.63□□□□□ -2.31
Col6a4A2AX52 Mir6341-201ENSMUST00000183490 121 ntBASIC0.63□□□□□ -2.31
Col6a4A2AX52 Gm29397-201ENSMUST00000185205 333 ntBASIC0.63□□□□□ -2.31
Col6a4A2AX52 n-R5s158-201ENSMUST00000104095 118 ntBASIC0.62□□□□□ -2.31
Col6a4A2AX52 Gm14678-201ENSMUST00000121396 482 ntBASIC0.62□□□□□ -2.31
Col6a4A2AX52 Gm14126-201ENSMUST00000122345 395 ntBASIC0.62□□□□□ -2.31
Col6a4A2AX52 Gm27676-201ENSMUST00000183669 61 ntBASIC0.62□□□□□ -2.31
Col6a4A2AX52 Gm36966-201ENSMUST00000192217 413 ntBASIC0.62□□□□□ -2.31
Col6a4A2AX52 Gm37650-201ENSMUST00000193570 248 ntTSL 1 (best) BASIC0.62□□□□□ -2.31
Col6a4A2AX52 Gm36929-201ENSMUST00000195152 166 ntTSL 5 BASIC0.62□□□□□ -2.31
Col6a4A2AX52 Gm43493-201ENSMUST00000199837 202 ntBASIC0.62□□□□□ -2.31
Col6a4A2AX52 Gm44041-201ENSMUST00000203678 396 ntBASIC0.62□□□□□ -2.31
Col6a4A2AX52 Gm44071-201ENSMUST00000204180 448 ntTSL 1 (best) BASIC0.62□□□□□ -2.31
Col6a4A2AX52 Gm45459-201ENSMUST00000209882 442 ntTSL 5 BASIC0.62□□□□□ -2.31
Col6a4A2AX52 AC113305.1-201ENSMUST00000214664 724 ntBASIC0.62□□□□□ -2.31
Col6a4A2AX52 Gm11857-201ENSMUST00000119817 324 ntBASIC0.61□□□□□ -2.31
Col6a4A2AX52 Gm15167-201ENSMUST00000121997 187 ntBASIC0.61□□□□□ -2.31
Col6a4A2AX52 Gm22088-201ENSMUST00000158341 117 ntBASIC0.61□□□□□ -2.31
Col6a4A2AX52 Mir5101-201ENSMUST00000175181 83 ntBASIC0.61□□□□□ -2.31
Col6a4A2AX52 Gm28000-201ENSMUST00000184380 85 ntBASIC0.61□□□□□ -2.31
Col6a4A2AX52 Gm37771-201ENSMUST00000193121 265 ntBASIC0.61□□□□□ -2.31
Col6a4A2AX52 Gm17990-201ENSMUST00000211728 553 ntBASIC0.61□□□□□ -2.31
Col6a4A2AX52 AC124569.1-201ENSMUST00000225932 101 ntBASIC0.61□□□□□ -2.31
Col6a4A2AX52 Gm23735-201ENSMUST00000082551 134 ntBASIC0.61□□□□□ -2.31
Col6a4A2AX52 Gm25403-201ENSMUST00000082971 143 ntBASIC0.61□□□□□ -2.31
Col6a4A2AX52 Gm24254-201ENSMUST00000083702 104 ntBASIC0.61□□□□□ -2.31
Col6a4A2AX52 Gm23104-201ENSMUST00000083722 104 ntBASIC0.61□□□□□ -2.31
Col6a4A2AX52 Defb41-202ENSMUST00000097817 198 ntAPPRIS P1 TSL 1 (best) BASIC0.61□□□□□ -2.31
Col6a4A2AX52 Gm3563-201ENSMUST00000172963 1628 ntBASIC0.61□□□□□ -2.31
Col6a4A2AX52 Gm14599-201ENSMUST00000120469 474 ntBASIC0.61□□□□□ -2.31
Col6a4A2AX52 Gm25108-201ENSMUST00000122473 78 ntBASIC0.61□□□□□ -2.31
Col6a4A2AX52 Gm24598-201ENSMUST00000122510 74 ntBASIC0.61□□□□□ -2.31
Col6a4A2AX52 Gm24839-201ENSMUST00000122602 107 ntBASIC0.61□□□□□ -2.31
Col6a4A2AX52 Gm23172-201ENSMUST00000157160 124 ntBASIC0.61□□□□□ -2.31
Col6a4A2AX52 Gm25333-201ENSMUST00000158035 246 ntBASIC0.61□□□□□ -2.31
Col6a4A2AX52 Mir3086-201ENSMUST00000175072 87 ntBASIC0.61□□□□□ -2.31
Col6a4A2AX52 Gm24080-201ENSMUST00000175178 232 ntBASIC0.61□□□□□ -2.31
Col6a4A2AX52 Gm25035-201ENSMUST00000175414 77 ntBASIC0.61□□□□□ -2.31
Col6a4A2AX52 Gm28011-201ENSMUST00000184097 175 ntBASIC0.61□□□□□ -2.31
Col6a4A2AX52 Mir6380-201ENSMUST00000184334 81 ntBASIC0.61□□□□□ -2.31
Col6a4A2AX52 Gm42976-201ENSMUST00000200313 222 ntBASIC0.61□□□□□ -2.31
Col6a4A2AX52 Gm20559-206ENSMUST00000202696 358 ntTSL 5 BASIC0.61□□□□□ -2.31
Col6a4A2AX52 AC100590.3-201ENSMUST00000219355 332 ntTSL 5 BASIC0.61□□□□□ -2.31
Col6a4A2AX52 AC112935.1-201ENSMUST00000227603 250 ntBASIC0.61□□□□□ -2.31
Col6a4A2AX52 Ear14-201ENSMUST00000049559 468 ntBASIC0.61□□□□□ -2.31
Col6a4A2AX52 Gm10717-201ENSMUST00000075573 684 ntTSL 5 BASIC0.61□□□□□ -2.31
Col6a4A2AX52 Gm22061-201ENSMUST00000082557 107 ntBASIC0.61□□□□□ -2.31
Retrieved 100 of 76,532 protein–RNA pairs in 134.7 ms